RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 PIP5K1CO60331 668 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 ALPPP05187 535 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 CHRNB1P11230 501 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 SLC1A2P43004 574 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 NFKB2Q00653 900 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 TNK2Q07912 1038 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 DCST2Q5T1A1 773 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 CEP97Q8IW35 865 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 TCEANCQ8N8B7 351 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 OR1F2PQ96R84 312 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 ZSCAN5AQ9BUG6 496 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 TMEM121BQ9BXQ6 578 aaPredicted RBP6.88□□□□□ -1.31
SPTA1-201ENST00000368147 LOC100509620A0A075B734 347 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 PRAMEF33A0A0G2JMD5 474 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 FEZF1A0PJY2 475 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 IGLON5A6NGN9 336 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 C11orf98E9PRG8 122 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 BLOC1S5-TXNDC5H3BN57 136 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 PRAMEF10O60809 474 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 OR4F21O95013 312 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 RENP00797 406 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 PGAM2P15259 253 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 LHCGRP22888 699 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 PTPN4P29074 926 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 MPIP34949 423 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 LRRC66Q68CR7 880 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 ZNF852Q6ZMS4 543 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 GPR65Q8IYL9 337 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 LRRN4CLQ8ND94 238 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 CEP76Q8TAP6 659 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 DNAJC19Q96DA6 116 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 B3GAT2Q9NPZ5 323 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 HRASLS2Q9NWW9 162 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 CDC14AQ9UNH5 594 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 PLEKHA6Q9Y2H5 1048 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 CLDN25C9JDP6 229 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 STK16O75716 305 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 IRF9Q00978 393 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 AKR1C8PQ5T2L2 129 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 IL23RQ5VWK5 629 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 WFIKKN2Q8TEU8 576 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 THEM6Q8WUY1 208 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 NIFKQ9BYG3 293 aaKnown RBP6.88□□□□□ -1.31
SPTA1-201ENST00000368147 MAGEH1Q9H213 219 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 TPK1Q9H3S4 243 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 PAK6Q9NQU5 681 aaPredicted RBP6.88□□□□□ -1.31
SPTA1-201ENST00000368147 EIF3KQ9UBQ5 218 aaKnown RBP6.88□□□□□ -1.31
SPTA1-201ENST00000368147 UTS2RQ9UKP6 389 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 PCDHGB2Q9Y5G2 931 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 PCDHGA5Q9Y5G8 931 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 TFECO14948 347 aaPredicted RBP6.88□□□□□ -1.31
SPTA1-201ENST00000368147 RNGTTO60942 597 aaKnown RBP6.88□□□□□ -1.31
SPTA1-201ENST00000368147 VAMP1P23763 118 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 DNAJA1P31689 397 aaKnown RBP6.88□□□□□ -1.31
SPTA1-201ENST00000368147 VIPR1P32241 457 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 NDST2P52849 883 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 PRKD1Q15139 912 aaPredicted RBP6.88□□□□□ -1.31
SPTA1-201ENST00000368147 ELOCQ15369 112 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 SIRPB2Q5JXA9 342 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 VWA5B1Q5TIE3 1220 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 SYPL2Q5VXT5 272 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 TMPRSS6Q8IU80 811 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 SFRP1Q8N474 314 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 C2orf15Q8WU43 125 aaKnown RBP6.88□□□□□ -1.31
SPTA1-201ENST00000368147 TRIB2Q92519 343 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 TMEM51Q9NW97 253 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 PLEKHM1Q9Y4G2 1056 aa6.88□□□□□ -1.31
SPTA1-201ENST00000368147 MATN3O15232 486 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 SEC14L5O43304 696 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 PDYNP01213 254 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 ASLP04424 464 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 YES1P07947 543 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 IQCF3P0C7M6 154 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 CTSKP43235 329 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 ZNF280AP59817 542 aaPredicted RBP6.87□□□□□ -1.31
SPTA1-201ENST00000368147 SLC3A1Q07837 685 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 OLIG2Q13516 323 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 LCLAT1Q6UWP7 414 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 ARSKQ6UWY0 536 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 STRADAQ7RTN6 431 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 ACBD4Q8NC06 268 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 C1GALT1C1Q96EU7 318 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 CCM2Q9BSQ5 444 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 OR8D2Q9GZM6 311 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 A0A0D9SEW6 157 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 C2orf78A6NCI8 922 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 FZD9O00144 591 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 NIPSNAP2O75323 286 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 ATP1B2P14415 290 aaPredicted RBP6.87□□□□□ -1.31
SPTA1-201ENST00000368147 IDO1P14902 403 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 TUBG1P23258 451 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 PREPP48147 710 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 OGDHQ02218 1023 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 DMWDQ09019 674 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 PCK2Q16822 640 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 MYLK3Q32MK0 819 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 ZACNQ401N2 412 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 TIGD2Q4W5G0 525 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 RAET1LQ5VY80 246 aa6.87□□□□□ -1.31
SPTA1-201ENST00000368147 PIWIL4Q7Z3Z4 852 aaKnown RBP6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms