RNA–Protein interactions for RNA: ENST00000368069.7

COPA-202, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene COPA, Length 4,664 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-202ENST00000368069 TMCO6Q96DC7 493 aa11.33□□□□□ -0.6
COPA-202ENST00000368069 TAC3Q9UHF0 121 aa11.33□□□□□ -0.6
COPA-202ENST00000368069 SNX7Q9UNH6 387 aa11.33□□□□□ -0.6
COPA-202ENST00000368069 RNF6Q9Y252 685 aa11.33□□□□□ -0.6
COPA-202ENST00000368069 TMA7Q9Y2S6 64 aaKnown RBP11.33□□□□□ -0.6
COPA-202ENST00000368069 SPIN1Q9Y657 262 aaPredicted RBP11.33□□□□□ -0.6
COPA-202ENST00000368069 CFAP20Q9Y6A4 193 aaKnown RBP11.33□□□□□ -0.6
COPA-202ENST00000368069 WNT6Q9Y6F9 365 aa11.33□□□□□ -0.6
COPA-202ENST00000368069 ABHD14A-ACY1A0A1B0GW23 586 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 TCRBV3S1A0A5B6 114 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 PSIP1O75475 530 aaKnown RBP11.32□□□□□ -0.6
COPA-202ENST00000368069 H1F0P07305 194 aaKnown RBP11.32□□□□□ -0.6
COPA-202ENST00000368069 CCR8P51685 355 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 TYSND1Q2T9J0 566 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 NDUFAF6Q330K2 333 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 CLLU1OSQ5K130 101 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 TMEM236Q5W0B7 351 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 SUSD1Q6UWL2 747 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 SLC22A16Q86VW1 577 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 ADGRG5Q8IZF4 528 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 SCML4Q8N228 414 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 DTWD1Q8N5C7 304 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 ZCCHC10Q8TBK6 192 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 WFIKKN2Q8TEU8 576 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 SOHLH2Q9NX45 425 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 ST14Q9Y5Y6 855 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 OAS3Q9Y6K5 1087 aaKnown RBP11.32□□□□□ -0.6
COPA-202ENST00000368069 WBP4O75554 376 aaKnown RBP11.32□□□□□ -0.6
COPA-202ENST00000368069 HIST1H2ABP04908 130 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 NT5EP21589 574 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 STAT5AP42229 794 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 EIF2B5Q13144 721 aaKnown RBP11.32□□□□□ -0.6
COPA-202ENST00000368069 DNASE1L3Q13609 305 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 ZNF404Q494X3 552 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 C5orf22Q49AR2 442 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 GTDC1Q4AE62 458 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 FBXO43Q4G163 708 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 DPY19L3Q6ZPD9 716 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 HIST3H2AQ7L7L0 130 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 RNF130Q86XS8 419 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 HIST1H2ACQ93077 130 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 RFKQ969G6 155 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 TTLL2Q9BWV7 592 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 CALML5Q9NZT1 146 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 RIMKLBQ9ULI2 386 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 ERVW-1Q9UQF0 538 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 ZNF451Q9Y4E5 1061 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 KDELR2P33947 212 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 RORCP51449 518 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 TXNL4AP83876 142 aaKnown RBP11.32□□□□□ -0.6
COPA-202ENST00000368069 LGALS3BPQ08380 585 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 ZNF630Q2M218 657 aaPredicted RBP11.32□□□□□ -0.6
COPA-202ENST00000368069 CYP27C1Q4G0S4 372 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 ZNF648Q5T619 568 aaPredicted RBP11.32□□□□□ -0.6
COPA-202ENST00000368069 LCN1P1Q5VSP4 162 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 ANKLE1Q8NAG6 615 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 TRPV1Q8NER1 839 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 WDR48Q8TAF3 677 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 NT5C3BQ969T7 300 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 MAPKAP1Q9BPZ7 522 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 DPH2Q9BQC3 489 aaPredicted RBP11.32□□□□□ -0.6
COPA-202ENST00000368069 UBAP1Q9NZ09 502 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 RHCGQ9UBD6 479 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 MALT1Q9UDY8 824 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 STRCQ7RTU9 1775 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 DLEC1Q9Y238 1755 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 GJB3O75712 270 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 MT-ND2P03891 347 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 FUT4P22083 530 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 MEF2AQ02078 507 aaPredicted RBP11.32□□□□□ -0.6
COPA-202ENST00000368069 ZNF763Q0D2J5 394 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 KLHL22Q53GT1 634 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 TRIM74Q86UV6 250 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 PARGQ86W56 976 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 MDGA1Q8NFP4 955 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 FNDC8Q8TC99 324 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 SLC22A17Q8WUG5 538 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 SLC5A11Q8WWX8 675 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 LCN9Q8WX39 176 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 UFD1Q92890 307 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 ALPK1Q96QP1 1244 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 SLC30A3Q99726 388 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 MARCH7Q9H992 704 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 DLGAP4Q9Y2H0 992 aa11.32□□□□□ -0.6
COPA-202ENST00000368069 FABP12A6NFH5 140 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 FBP2O00757 339 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 SOX14O95416 240 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 ALDOCP09972 364 aaKnown RBP11.31□□□□□ -0.6
COPA-202ENST00000368069 CYBAP13498 195 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 ACP5P13686 325 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 BPIP17213 487 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 ETV3P41162 512 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 CLDN8P56748 225 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 TUBA1BP68363 451 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 IRF5Q13568 498 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 ATP13A5Q4VNC0 1218 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 NIPAL1Q6NVV3 410 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 TMIGD1Q6UXZ0 262 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 TUBA1AQ71U36 451 aa11.31□□□□□ -0.6
COPA-202ENST00000368069 NANOGNBQ7Z5D8 188 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms