RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 TMEM121BQ9BXQ6 578 aaPredicted RBP11.17□□□□□ -0.62
USF1-201ENST00000368019 SLC29A3Q9BZD2 475 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 KAT8Q9H7Z6 458 aaKnown RBP11.17□□□□□ -0.62
USF1-201ENST00000368019 TMEM74BQ9NUR3 256 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 CD274Q9NZQ7 290 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 VAPAQ9P0L0 249 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 TMEFF2Q9UIK5 374 aaPredicted RBP11.17□□□□□ -0.62
USF1-201ENST00000368019 HCN2Q9UL51 889 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 ZFYVE26Q68DK2 2539 aa11.17□□□□□ -0.62
USF1-201ENST00000368019 A0A096LPI6 279 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 CCL22O00626 93 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 RAD51BO15315 384 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 HOXC11O43248 304 aaPredicted RBP11.16□□□□□ -0.62
USF1-201ENST00000368019 GREM1O60565 184 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 CREG1O75629 220 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 MOCS2O96007 188 aaPredicted RBP11.16□□□□□ -0.62
USF1-201ENST00000368019 CAPN1P07384 714 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 G6PDP11413 515 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 CR2P20023 1033 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 PRPH2P23942 346 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 FMO4P31512 558 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 PIGAP37287 484 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 PIK3CGP48736 1102 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 GZMMP51124 257 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 HK3P52790 923 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 PHC1P78364 1004 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 TRAF3Q13114 568 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 MAPKAPK3Q16644 382 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 PTPRNQ16849 979 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 IMPG1Q17R60 797 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 ZNF181Q2M3W8 571 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 HECTD3Q5T447 861 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 CACHD1Q5VU97 1274 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 MLIPQ5VWP3 458 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 PEAR1Q5VY43 1037 aaPredicted RBP11.16□□□□□ -0.62
USF1-201ENST00000368019 FBXL22Q6P050 247 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 LETMD1Q6P1Q0 360 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 SPESP1Q6UW49 350 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 IL27RAQ6UWB1 636 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 CERS6Q6ZMG9 384 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 CCDC80Q76M96 950 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 TRIM46Q7Z4K8 759 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 GOLGA7Q7Z5G4 137 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 ADCK1Q86TW2 530 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 CHPFQ8IZ52 775 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 CADM3Q8N126 398 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 CDYL2Q8N8U2 506 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 RHOXF1Q8NHV9 184 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 MCOLN3Q8TDD5 553 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 STARD8Q92502 1023 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 PIGKQ92643 395 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 LINGO1Q96FE5 620 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 PYURFQ96I23 114 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 HEPHQ9BQS7 1158 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 CPPED1Q9BRF8 314 aaPredicted RBP11.16□□□□□ -0.62
USF1-201ENST00000368019 BTBD2Q9BX70 525 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 ASPSCR1Q9BZE9 553 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 TRIM8Q9BZR9 551 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 DPY30Q9C005 99 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 MMP27Q9H306 513 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 EHD1Q9H4M9 534 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 CLMPQ9H6B4 373 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 CCSER2Q9H7U1 834 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 SMURF2Q9HAU4 748 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 TM9SF3Q9HD45 589 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 POLMQ9NP87 494 aaPredicted RBP11.16□□□□□ -0.62
USF1-201ENST00000368019 ZDHHC4Q9NPG8 344 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 C1orf109Q9NX04 203 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 GALPQ9UBC7 116 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 EIF2B4Q9UI10 523 aaKnown RBP11.16□□□□□ -0.62
USF1-201ENST00000368019 USP22Q9UPT9 525 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 SAMD4AQ9UPU9 718 aaKnown RBP11.16□□□□□ -0.62
USF1-201ENST00000368019 ERVK-11Q9UQG0 969 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 DHRS7Q9Y394 339 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 PCDHGA10Q9Y5H3 936 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 PKD1L2Q7Z442 2459 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 ASPMQ8IZT6 3477 aa11.16□□□□□ -0.62
USF1-201ENST00000368019 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 SERTM1A2A2V5 107 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 TTC34A8MYJ7 566 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 C1QTNF9BB2RNN3 333 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 OR7A17O14581 309 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 HS6ST1O60243 411 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 DFNA5O60443 496 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 INMTO95050 263 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 CCNDBP1O95273 360 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 NADKO95544 446 aaPredicted RBP11.15□□□□□ -0.62
USF1-201ENST00000368019 MT-ND1P03886 318 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 C1QTNF9P0C862 333 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 PRPS2P11908 318 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 BMP4P12644 408 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 HOXB9P17482 250 aaPredicted RBP11.15□□□□□ -0.62
USF1-201ENST00000368019 FPR1P21462 350 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 CASP2P42575 452 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 RXRGP48443 463 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 PGFP49763 221 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 AGTR2P50052 363 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 ARHGDIAP52565 204 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 ABRQ12979 859 aa11.15□□□□□ -0.62
USF1-201ENST00000368019 GTF2H2Q13888 395 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms