RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 ANKHQ9HCJ1 492 aa14.06□□□□□ -0.16
CTSD-202ENST00000367196 ASIC3Q9UHC3 531 aa14.06□□□□□ -0.16
CTSD-202ENST00000367196 CPAMD8Q8IZJ3 1885 aa14.06□□□□□ -0.16
CTSD-202ENST00000367196 DIDO1Q9BTC0 2240 aaKnown RBP14.05□□□□□ -0.16
CTSD-202ENST00000367196 A0A1B0GUH1 482 aa14.05□□□□□ -0.16
CTSD-202ENST00000367196 FFAR3O14843 346 aa14.05□□□□□ -0.16
CTSD-202ENST00000367196 GPR42O15529 346 aa14.05□□□□□ -0.16
CTSD-202ENST00000367196 P2RX6O15547 441 aa14.05□□□□□ -0.16
CTSD-202ENST00000367196 ZSCAN12O43309 604 aa14.05□□□□□ -0.16
CTSD-202ENST00000367196 AGTR2P50052 363 aa14.05□□□□□ -0.16
CTSD-202ENST00000367196 PCOLCEQ15113 449 aa14.05□□□□□ -0.16
CTSD-202ENST00000367196 KCTD19Q17RG1 926 aaPredicted RBP14.05□□□□□ -0.16
CTSD-202ENST00000367196 MINDY4Q4G0A6 757 aa14.05□□□□□ -0.16
CTSD-202ENST00000367196 SPANXN3Q5MJ09 141 aa14.05□□□□□ -0.16
CTSD-202ENST00000367196 RNASEH2BQ5TBB1 312 aaKnown RBP14.05□□□□□ -0.16
CTSD-202ENST00000367196 ABHD17BQ5VST6 288 aa14.05□□□□□ -0.16
CTSD-202ENST00000367196 HIST2H2BCQ6DN03 193 aa14.05□□□□□ -0.16
CTSD-202ENST00000367196 CAPN13Q6MZZ7 669 aaPredicted RBP14.05□□□□□ -0.16
CTSD-202ENST00000367196 NIPAL1Q6NVV3 410 aa14.05□□□□□ -0.16
CTSD-202ENST00000367196 GALNT7Q86SF2 657 aa14.05□□□□□ -0.16
CTSD-202ENST00000367196 PLD3Q8IV08 490 aa14.05□□□□□ -0.16
CTSD-202ENST00000367196 TBC1D19Q8N5T2 526 aa14.05□□□□□ -0.16
CTSD-202ENST00000367196 OSBPL9Q96SU4 736 aa14.05□□□□□ -0.16
CTSD-202ENST00000367196 HAUS8Q9BT25 410 aa14.05□□□□□ -0.16
CTSD-202ENST00000367196 TRIM54Q9BYV2 358 aa14.05□□□□□ -0.16
CTSD-202ENST00000367196 CORO1CQ9ULV4 474 aaPredicted RBP14.05□□□□□ -0.16
CTSD-202ENST00000367196 ZGRF1Q86YA3 2104 aa14.05□□□□□ -0.16
CTSD-202ENST00000367196 DNALI1O14645 258 aaPredicted RBP14.04□□□□□ -0.16
CTSD-202ENST00000367196 CLDN1O95832 211 aa14.04□□□□□ -0.16
CTSD-202ENST00000367196 CRYABP02511 175 aaKnown RBP14.04□□□□□ -0.16
CTSD-202ENST00000367196 IL10P22301 178 aa14.04□□□□□ -0.16
CTSD-202ENST00000367196 XCR1P46094 333 aa14.04□□□□□ -0.16
CTSD-202ENST00000367196 AP1S2P56377 157 aa14.04□□□□□ -0.16
CTSD-202ENST00000367196 MAT1AQ00266 395 aaKnown RBP14.04□□□□□ -0.16
CTSD-202ENST00000367196 PDAP1Q13442 181 aaKnown RBP14.04□□□□□ -0.16
CTSD-202ENST00000367196 SYT16Q17RD7 645 aa14.04□□□□□ -0.16
CTSD-202ENST00000367196 TMEM214Q6NUQ4 689 aaKnown RBP14.04□□□□□ -0.16
CTSD-202ENST00000367196 AGTRAPQ6RW13 159 aa14.04□□□□□ -0.16
CTSD-202ENST00000367196 LCTLQ6UWM7 567 aa14.04□□□□□ -0.16
CTSD-202ENST00000367196 ASPGQ86U10 573 aa14.04□□□□□ -0.16
CTSD-202ENST00000367196 CNTN4Q8IWV2 1026 aa14.04□□□□□ -0.16
CTSD-202ENST00000367196 CATSPER1Q8NEC5 780 aa14.04□□□□□ -0.16
CTSD-202ENST00000367196 OR9A4Q8NGU2 314 aa14.04□□□□□ -0.16
CTSD-202ENST00000367196 OR51Q1Q8NH59 317 aa14.04□□□□□ -0.16
CTSD-202ENST00000367196 EEF1AKMT1Q8WVE0 214 aa14.04□□□□□ -0.16
CTSD-202ENST00000367196 ATL1Q8WXF7 558 aa14.04□□□□□ -0.16
CTSD-202ENST00000367196 PSMF1Q92530 271 aa14.04□□□□□ -0.16
CTSD-202ENST00000367196 NDNQ99608 321 aa14.04□□□□□ -0.16
CTSD-202ENST00000367196 MESP1Q9BRJ9 268 aa14.04□□□□□ -0.16
CTSD-202ENST00000367196 SYNPO2LQ9H987 977 aa14.04□□□□□ -0.16
CTSD-202ENST00000367196 ABI3Q9P2A4 366 aa14.04□□□□□ -0.16
CTSD-202ENST00000367196 PDE10AQ9Y233 779 aa14.04□□□□□ -0.16
CTSD-202ENST00000367196 OSGIN2Q9Y236 505 aa14.04□□□□□ -0.16
CTSD-202ENST00000367196 TEX15Q9BXT5 2789 aa14.04□□□□□ -0.16
CTSD-202ENST00000367196 LRRTM2O43300 516 aa14.03□□□□□ -0.16
CTSD-202ENST00000367196 JRKO75564 520 aa14.03□□□□□ -0.16
CTSD-202ENST00000367196 F7P08709 466 aaPredicted RBP14.03□□□□□ -0.16
CTSD-202ENST00000367196 BCL6P41182 706 aa14.03□□□□□ -0.16
CTSD-202ENST00000367196 IL2P60568 153 aa14.03□□□□□ -0.16
CTSD-202ENST00000367196 CSNK1G2P78368 415 aa14.03□□□□□ -0.16
CTSD-202ENST00000367196 ZNF33BQ06732 778 aa14.03□□□□□ -0.16
CTSD-202ENST00000367196 DHX9Q08211 1270 aaKnown RBP14.03□□□□□ -0.16
CTSD-202ENST00000367196 NAE1Q13564 534 aa14.03□□□□□ -0.16
CTSD-202ENST00000367196 HERC3Q15034 1050 aa14.03□□□□□ -0.16
CTSD-202ENST00000367196 PLAG1Q6DJT9 500 aa14.03□□□□□ -0.16
CTSD-202ENST00000367196 HIBCHQ6NVY1 386 aaPredicted RBP14.03□□□□□ -0.16
CTSD-202ENST00000367196 VN1R4Q7Z5H5 301 aa14.03□□□□□ -0.16
CTSD-202ENST00000367196 CPEB2Q7Z5Q1 589 aaKnown RBP14.03□□□□□ -0.16
CTSD-202ENST00000367196 SLC34A3Q8N130 599 aa14.03□□□□□ -0.16
CTSD-202ENST00000367196 PDIK1LQ8N165 341 aa14.03□□□□□ -0.16
CTSD-202ENST00000367196 AGGF1Q8N302 714 aaeCLIP14.03□□□□□ -0.16
CTSD-202ENST00000367196 SLC13A3Q8WWT9 602 aa14.03□□□□□ -0.16
CTSD-202ENST00000367196 NR4A3Q92570 626 aa14.03□□□□□ -0.16
CTSD-202ENST00000367196 LINGO1Q96FE5 620 aa14.03□□□□□ -0.16
CTSD-202ENST00000367196 CERS2Q96G23 380 aa14.03□□□□□ -0.16
CTSD-202ENST00000367196 RUNDC3BQ96NL0 473 aa14.03□□□□□ -0.16
CTSD-202ENST00000367196 VN1R1Q9GZP7 353 aa14.03□□□□□ -0.16
CTSD-202ENST00000367196 PPANQ9NQ55 473 aaKnown RBP14.03□□□□□ -0.16
CTSD-202ENST00000367196 ARL15Q9NXU5 204 aa14.03□□□□□ -0.16
CTSD-202ENST00000367196 SNX12Q9UMY4 172 aa14.03□□□□□ -0.16
CTSD-202ENST00000367196 OR5H15A6NDH6 313 aa14.02□□□□□ -0.17
CTSD-202ENST00000367196 RASAL1O95294 804 aa14.02□□□□□ -0.17
CTSD-202ENST00000367196 WDPCPO95876 746 aa14.02□□□□□ -0.17
CTSD-202ENST00000367196 STSP08842 583 aa14.02□□□□□ -0.17
CTSD-202ENST00000367196 ENO2P09104 434 aaPredicted RBP14.02□□□□□ -0.17
CTSD-202ENST00000367196 ITGAMP11215 1152 aa14.02□□□□□ -0.17
CTSD-202ENST00000367196 IL1RNP18510 177 aa14.02□□□□□ -0.17
CTSD-202ENST00000367196 DCTP40126 519 aa14.02□□□□□ -0.17
CTSD-202ENST00000367196 CCR8P51685 355 aa14.02□□□□□ -0.17
CTSD-202ENST00000367196 EXT1Q16394 746 aa14.02□□□□□ -0.17
CTSD-202ENST00000367196 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.02□□□□□ -0.17
CTSD-202ENST00000367196 BTBD16Q32M84 506 aa14.02□□□□□ -0.17
CTSD-202ENST00000367196 DUPD1Q68J44 220 aa14.02□□□□□ -0.17
CTSD-202ENST00000367196 PAQR3Q6TCH7 311 aa14.02□□□□□ -0.17
CTSD-202ENST00000367196 SYDE1Q6ZW31 735 aaPredicted RBP14.02□□□□□ -0.17
CTSD-202ENST00000367196 SLC35F6Q8N357 371 aa14.02□□□□□ -0.17
CTSD-202ENST00000367196 DNAJB8Q8NHS0 232 aa14.02□□□□□ -0.17
CTSD-202ENST00000367196 SLCO2A1Q92959 643 aa14.02□□□□□ -0.17
CTSD-202ENST00000367196 ALKBH8Q96BT7 664 aaKnown RBP14.02□□□□□ -0.17
CTSD-202ENST00000367196 IMMP1LQ96LU5 166 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms