RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 ULK1O75385 1050 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 MTHFD1P11586 935 aaKnown RBP8.9□□□□□ -0.98
CNIH4-202ENST00000366857 PEX2P28328 305 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 NNMTP40261 264 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 PLAURQ03405 335 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 DUSP2Q05923 314 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 C16orf72Q14CZ0 275 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 FBXO43Q4G163 708 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 CFAP206Q8IYR0 622 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 PQLC1Q8N2U9 271 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 FRMD1Q8N878 549 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 OR2T34Q8NGX1 318 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 CXorf40AQ8TE69 158 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 SLC13A3Q8WWT9 602 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 SLC5A11Q8WWX8 675 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 NTNG2Q96CW9 530 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 TSNARE1Q96NA8 513 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 SLC29A1Q99808 456 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 ECSITQ9BQ95 431 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 OSBPL6Q9BZF3 934 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 CCDC68Q9H2F9 335 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 CUEDC1Q9NWM3 386 aaPredicted RBP8.9□□□□□ -0.98
CNIH4-202ENST00000366857 CROTQ9UKG9 612 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 LRIT2A6NDA9 550 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 RNASEH1O60930 286 aaKnown RBP8.9□□□□□ -0.98
CNIH4-202ENST00000366857 ST8SIA6P61647 398 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 BNIP2Q12982 314 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 CHIT1Q13231 466 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 OGFOD3Q6PK18 319 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 IKBIPQ70UQ0 350 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 TMEM179BQ7Z7N9 219 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 RYBPQ8N488 228 aaPredicted RBP8.9□□□□□ -0.98
CNIH4-202ENST00000366857 BHLHE22Q8NFJ8 381 aaPredicted RBP8.9□□□□□ -0.98
CNIH4-202ENST00000366857 PPP1R14CQ8TAE6 165 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 WDR48Q8TAF3 677 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 ATL1Q8WXF7 558 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 MTERF3Q96E29 417 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 BTBD9Q96Q07 612 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 CLDND1Q9NY35 253 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 VPS29Q9UBQ0 182 aa8.9□□□□□ -0.98
CNIH4-202ENST00000366857 TMEFF2Q9UIK5 374 aaPredicted RBP8.9□□□□□ -0.98
CNIH4-202ENST00000366857 SPTY2D1-AS1A0A0U1RR47 76 aa8.9□□□□□ -0.99
CNIH4-202ENST00000366857 H3BM21 787 aa8.9□□□□□ -0.99
CNIH4-202ENST00000366857 AIM2O14862 343 aa8.9□□□□□ -0.99
CNIH4-202ENST00000366857 CLPSP04118 112 aa8.9□□□□□ -0.99
CNIH4-202ENST00000366857 HSD17B2P37059 387 aa8.9□□□□□ -0.99
CNIH4-202ENST00000366857 VHLP40337 213 aa8.9□□□□□ -0.99
CNIH4-202ENST00000366857 SLC7A2P52569 658 aa8.9□□□□□ -0.99
CNIH4-202ENST00000366857 PRDX1Q06830 199 aaKnown RBP8.9□□□□□ -0.99
CNIH4-202ENST00000366857 CAPRIN1Q14444 709 aaKnown RBP8.9□□□□□ -0.99
CNIH4-202ENST00000366857 INAVAQ3KP66 663 aa8.9□□□□□ -0.99
CNIH4-202ENST00000366857 GTDC1Q4AE62 458 aa8.9□□□□□ -0.99
CNIH4-202ENST00000366857 SAMD4BQ5PRF9 694 aaKnown RBP8.9□□□□□ -0.99
CNIH4-202ENST00000366857 COMTD1Q86VU5 262 aa8.9□□□□□ -0.99
CNIH4-202ENST00000366857 OR4C15Q8NGM1 316 aa8.9□□□□□ -0.99
CNIH4-202ENST00000366857 ATP6V1E2Q96A05 226 aa8.9□□□□□ -0.99
CNIH4-202ENST00000366857 CAMK1GQ96NX5 476 aa8.9□□□□□ -0.99
CNIH4-202ENST00000366857 HBEGFQ99075 208 aa8.9□□□□□ -0.99
CNIH4-202ENST00000366857 BHLHE41Q9C0J9 482 aaPredicted RBP8.9□□□□□ -0.99
CNIH4-202ENST00000366857 PCED1AQ9H1Q7 454 aa8.9□□□□□ -0.99
CNIH4-202ENST00000366857 ALG2Q9H553 416 aa8.9□□□□□ -0.99
CNIH4-202ENST00000366857 MAGIXQ9H6Y5 334 aa8.9□□□□□ -0.99
CNIH4-202ENST00000366857 SNX6Q9UNH7 406 aa8.9□□□□□ -0.99
CNIH4-202ENST00000366857 CFAP47Q6ZTR5 3102 aa8.9□□□□□ -0.99
CNIH4-202ENST00000366857 ADAM10O14672 748 aa8.89□□□□□ -0.99
CNIH4-202ENST00000366857 CSPG5O95196 566 aa8.89□□□□□ -0.99
CNIH4-202ENST00000366857 GSTM2P28161 218 aa8.89□□□□□ -0.99
CNIH4-202ENST00000366857 TIA1P31483 386 aaKnown RBP eCLIP8.89□□□□□ -0.99
CNIH4-202ENST00000366857 TSFMP43897 325 aaKnown RBP8.89□□□□□ -0.99
CNIH4-202ENST00000366857 GPR1P46091 355 aa8.89□□□□□ -0.99
CNIH4-202ENST00000366857 PPP2R2BQ00005 443 aa8.89□□□□□ -0.99
CNIH4-202ENST00000366857 MAD2L1Q13257 205 aaPredicted RBP8.89□□□□□ -0.99
CNIH4-202ENST00000366857 E2F5Q15329 346 aa8.89□□□□□ -0.99
CNIH4-202ENST00000366857 RBBP7Q16576 425 aa8.89□□□□□ -0.99
CNIH4-202ENST00000366857 SPIN4Q56A73 249 aa8.89□□□□□ -0.99
CNIH4-202ENST00000366857 KIAA1614Q5VZ46 1190 aa8.89□□□□□ -0.99
CNIH4-202ENST00000366857 SAXO2Q658L1 398 aa8.89□□□□□ -0.99
CNIH4-202ENST00000366857 FBXO42Q6P3S6 717 aa8.89□□□□□ -0.99
CNIH4-202ENST00000366857 MIPOL1Q8TD10 442 aa8.89□□□□□ -0.99
CNIH4-202ENST00000366857 MCOLN3Q8TDD5 553 aa8.89□□□□□ -0.99
CNIH4-202ENST00000366857 TFAP2CQ92754 450 aa8.89□□□□□ -0.99
CNIH4-202ENST00000366857 TUBGCP3Q96CW5 907 aa8.89□□□□□ -0.99
CNIH4-202ENST00000366857 OR2A5Q96R48 311 aa8.89□□□□□ -0.99
CNIH4-202ENST00000366857 SPATA9Q9BWV2 254 aa8.89□□□□□ -0.99
CNIH4-202ENST00000366857 TMEM38AQ9H6F2 299 aa8.89□□□□□ -0.99
CNIH4-202ENST00000366857 CCDC88CQ9P219 2028 aa8.89□□□□□ -0.99
CNIH4-202ENST00000366857 SNX2O60749 519 aa8.89□□□□□ -0.99
CNIH4-202ENST00000366857 MSX2P35548 267 aaPredicted RBP8.89□□□□□ -0.99
CNIH4-202ENST00000366857 BCL6P41182 706 aa8.89□□□□□ -0.99
CNIH4-202ENST00000366857 BLMHQ13867 455 aa8.89□□□□□ -0.99
CNIH4-202ENST00000366857 RAET1GQ6H3X3 334 aa8.89□□□□□ -0.99
CNIH4-202ENST00000366857 CES5AQ6NT32 575 aa8.89□□□□□ -0.99
CNIH4-202ENST00000366857 AMZ2Q86W34 360 aa8.89□□□□□ -0.99
CNIH4-202ENST00000366857 CCL4L1Q8NHW4 92 aa8.89□□□□□ -0.99
CNIH4-202ENST00000366857 DNASE2BQ8WZ79 361 aa8.89□□□□□ -0.99
CNIH4-202ENST00000366857 MRPL1Q9BYD6 325 aaKnown RBP8.89□□□□□ -0.99
CNIH4-202ENST00000366857 RAB33BQ9H082 229 aa8.89□□□□□ -0.99
CNIH4-202ENST00000366857 ATG10Q9H0Y0 220 aa8.89□□□□□ -0.99
CNIH4-202ENST00000366857 FBXL12Q9NXK8 326 aa8.89□□□□□ -0.99
CNIH4-202ENST00000366857 VNN3Q9NY84 501 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 172.1 ms