RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 MAGP20916 626 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 MPIP34949 423 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 VBP1P61758 197 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 PMS2P3Q13401 168 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 DNASE1L3Q13609 305 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 NOXRED1Q6NXP6 359 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 COG8Q96MW5 612 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 LPIN3Q9BQK8 851 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 COPZ2Q9P299 210 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 COL24A1Q17RW2 1714 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 BRWD1Q9NSI6 2320 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 SLC35G6P0C7Q6 338 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 DDX6P26196 483 aaKnown RBP eCLIP11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 GSTM4Q03013 218 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 LRRC20Q8TCA0 184 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 PHOX2BQ99453 314 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 C16orf70Q9BSU1 422 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 FCF1Q9Y324 198 aaKnown RBP11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 RHCEP18577 417 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 CLK3P49761 638 aaKnown RBP11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 POMGNT2Q8NAT1 580 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 SNX33Q8WV41 574 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 HAPLN2Q9GZV7 340 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 GPN2Q9H9Y4 310 aaPredicted RBP11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 RBMX2Q9Y388 322 aaKnown RBP11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 RBBP6Q7Z6E9 1792 aaKnown RBP11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 FAAHO00519 579 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 ALPPP05187 535 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 ATXN7L2Q5T6C5 722 aaPredicted RBP11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 OR10H4Q8NGA5 316 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 ARNTL2Q8WYA1 636 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 KCNS3Q9BQ31 491 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 ENPP5Q9UJA9 477 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 COL5A3P25940 1745 aaPredicted RBP11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 UGDHO60701 494 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 RHAGQ02094 409 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 AMZ2Q86W34 360 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 C1QTNF1Q9BXJ1 281 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 TBC1D17Q9HA65 648 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 ABCB9Q9NP78 766 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 KLHL42Q9P2K6 505 aa11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 EXOSC1Q9Y3B2 195 aaKnown RBP11.45□□□□□ -0.58
CDC42BPA-202ENST00000366764 HLA-DQA2P01906 255 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 EIF4HQ15056 248 aaKnown RBP11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 RUNDC3AQ59EK9 446 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 ZSWIM9Q86XI8 627 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 EBF1Q9UH73 591 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 CHRM1P11229 460 aaPredicted RBP11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 ELK4P28324 431 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 CMPK1P30085 196 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 SH3BP2P78314 561 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 VMACQ2NL98 169 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 ASCC1Q8N9N2 400 aaKnown RBP11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 GSDMCQ9BYG8 508 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 FBRSL1Q9HCM7 1045 aaKnown RBP11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 SLC25A12O75746 678 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 SLBPQ14493 270 aaKnown RBP eCLIP11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 FAM189A2Q15884 450 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 CLEC14AQ86T13 490 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 GFM1Q96RP9 751 aaKnown RBP11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 TNFRSF10DQ9UBN6 386 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 ARL6IP5O75915 188 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 HNRNPFP52597 415 aaKnown RBP11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 PPP3R1P63098 170 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 HSPB3Q12988 150 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 KEAP1Q14145 624 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 TSC22D1Q15714 1073 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 ABHD11Q8NFV4 315 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 ALPK1Q96QP1 1244 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 DEC1Q9P2X7 70 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 PCTPQ9UKL6 214 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 STUB1Q9UNE7 303 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 TMEM5Q9Y2B1 443 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 FAM72CH0Y354 149 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 CD2P06729 351 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 FLT3LGP49771 235 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 SP3Q02447 781 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 CLCA4Q14CN2 919 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 FAM72AQ5TYM5 149 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 FAM72DQ6L9T8 149 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 RASSF6Q6ZTQ3 369 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 JAZF1Q86VZ6 243 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 FAM72BQ86X60 149 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 ICE1Q9Y2F5 2266 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 CLIC3O95833 236 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 GNG2P59768 71 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 GRB7Q14451 532 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 CHERPQ8IWX8 916 aaKnown RBP11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 ZNF675Q8TD23 568 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 ISL2Q96A47 359 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 TREX1Q9NSU2 369 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 RFPL2O75678 378 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 NUDT14O95848 222 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 RB1P06400 928 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 BCKDHAP12694 445 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 SETD6Q8TBK2 473 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 TVP23BQ9NYZ1 205 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 MAFFQ9ULX9 164 aa11.44□□□□□ -0.58
CDC42BPA-202ENST00000366764 CPQQ9Y646 472 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms