RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 FAM169AQ9Y6X4 670 aa7.96□□□□□ -1.14
HMGB1P39-201ENST00000366304 MEGF8Q7Z7M0 2845 aa7.96□□□□□ -1.14
HMGB1P39-201ENST00000366304 PINLYPA6NC86 204 aa7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 TRIM64A6NGJ6 449 aa7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 TRIM64BA6NI03 449 aa7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 ARHGEF33A8MVX0 844 aa7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 TFECO14948 347 aaPredicted RBP7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 AP2A2O94973 939 aa7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 THBS1P07996 1170 aa7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 BDKRB1P46663 353 aa7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 ITGA8P53708 1063 aa7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 GPR85P60893 370 aa7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 AP2B1P63010 937 aa7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 KEAP1Q14145 624 aa7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 SPARCL1Q14515 664 aa7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 GXYLT1Q4G148 440 aa7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 MDGA2Q7Z553 956 aa7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 CSNK1A1LQ8N752 337 aa7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 RELL2Q8NC24 303 aaPredicted RBP7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 OR9A4Q8NGU2 314 aa7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 C16orf52Q8NHV5 167 aa7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 M1APQ8TC57 530 aa7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 SLC22A18Q96BI1 424 aa7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 CCDC138Q96M89 665 aa7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 OR2A5Q96R48 311 aa7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 ZFYVE21Q9BQ24 234 aa7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 DPH7Q9BTV6 452 aa7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 FSD1LQ9BXM9 530 aa7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 MMP25Q9NPA2 562 aa7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 DEPPQ9NTK1 212 aa7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 TRMT1Q9NXH9 659 aaKnown RBP7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 TRPS1Q9UHF7 1281 aa7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 RSPH14Q9UHP6 348 aa7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 CDC14AQ9UNH5 594 aa7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 R3HDM2Q9Y2K5 976 aaKnown RBP7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 NFS1Q9Y697 457 aa7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 SCN2AQ99250 2005 aa7.95□□□□□ -1.14
HMGB1P39-201ENST00000366304 A0A0G2JMM0 328 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 A0A1W2PPB8 328 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 A0A1W2PRS3 328 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 SOWAHDA6NJG2 315 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 A6NJY4 79 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 USP27XA6NNY8 438 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 IQCF5A8MTL0 148 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 RNF212BA8MTL3 300 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 KIR3DP1A8MWS1 328 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 NPIPA2E9PIF3 369 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 NPIPA3F8WFD2 350 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 H7C0S8 307 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 SLC16A5O15375 505 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 PEX1O43933 1283 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 GPC4O75487 556 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 SUN1O94901 812 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 KRT1P04264 644 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 GSTM1P09488 218 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 CDKN2BP42772 138 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 ZFP36L2P47974 494 aaKnown RBP7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 MLF1P58340 268 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 DCAF7P61962 342 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 GSTM4Q03013 218 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 KRTAP1-1Q07627 177 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 USP10Q14694 798 aaKnown RBP7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 DAZAP2Q15038 168 aaPredicted RBP7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 MINDY4Q4G0A6 757 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 FLYWCH1Q4VC44 716 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 SYTL3Q4VX76 610 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 SFT2D3Q587I9 215 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 DNAJC21Q5F1R6 531 aaKnown RBP7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 PAPD4Q6PIY7 484 aaKnown RBP7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 PACS1Q6VY07 963 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 ACAD11Q709F0 780 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 PAQR7Q86WK9 346 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 DCUN1D3Q8IWE4 304 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 SVOPQ8N4V2 548 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 ZFP62Q8NB50 900 aaPredicted RBP7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 FAM98AQ8NCA5 519 aaKnown RBP7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 MYRIPQ8NFW9 859 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 OR5M3Q8NGP4 307 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 OR10Q1Q8NGQ4 319 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 ELP5Q8TE02 316 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 TSLPQ969D9 159 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 HAUS1Q96CS2 278 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 MVB12AQ96EY5 273 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 CDKN2AIPNLQ96HQ2 116 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 QKIQ96PU8 341 aaKnown RBP eCLIP7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 SH3GL2Q99962 352 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 MACROD1Q9BQ69 325 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 PLCD4Q9BRC7 762 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 CNPPD1Q9BV87 410 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 ACAT2Q9BWD1 397 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 DRC3Q9H069 523 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 GBA3Q9H227 469 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 NEUROD4Q9HD90 331 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 NLE1Q9NVX2 485 aaPredicted RBP7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 HCN3Q9P1Z3 774 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 HYOU1Q9Y4L1 999 aa7.94□□□□□ -1.14
HMGB1P39-201ENST00000366304 PHF3Q92576 2039 aaKnown RBP7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 ZNF407Q9C0G0 2248 aa7.93□□□□□ -1.14
HMGB1P39-201ENST00000366304 KDM4EB2RXH2 506 aaPredicted RBP7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms