RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 CREBZFQ9NS37 354 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 OR51B4Q9Y5P0 310 aa10.23□□□□□ -0.77
SMC3-201ENST00000361804 KIF26AQ9ULI4 1882 aaPredicted RBP10.23□□□□□ -0.77
SMC3-201ENST00000361804 EVPLLA8MZ36 301 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 TMEM229AB2RXF0 380 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 DSCR3O14972 297 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 TLL1O43897 1013 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 AIREO43918 545 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 CYP7B1O75881 506 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 PTHP01270 115 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 PABPC1P11940 636 aaKnown RBP10.22□□□□□ -0.77
SMC3-201ENST00000361804 DNAJA1P31689 397 aaKnown RBP10.22□□□□□ -0.77
SMC3-201ENST00000361804 EIF2DP41214 584 aaKnown RBP10.22□□□□□ -0.77
SMC3-201ENST00000361804 ACOX1Q15067 660 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 LYSMD2Q8IV50 215 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 HS6ST3Q8IZP7 471 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 NAGSQ8N159 534 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 CELF2-AS1Q8N7Q2 184 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 COPS8Q99627 209 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 CLSTN3Q9BQT9 956 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 REEP1Q9H902 201 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 C2orf16Q68DN1 1984 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 PRAMEF25A6NGN4 478 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 A8MV72 311 aaPredicted RBP10.22□□□□□ -0.77
SMC3-201ENST00000361804 MAGEB17A8MXT2 336 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 E7EQ34 232 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 M0QX08 132 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 SCN2BO60939 215 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 GCM2O75603 506 aaPredicted RBP10.22□□□□□ -0.77
SMC3-201ENST00000361804 CD9P21926 228 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 HTRA3P83110 453 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 ABRQ12979 859 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 GANABQ14697 944 aaKnown RBP10.22□□□□□ -0.77
SMC3-201ENST00000361804 SLC5A8Q8N695 610 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 ASIC4Q96FT7 647 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 SCLYQ96I15 445 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 MAGIXQ9H6Y5 334 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 RMND5AQ9H871 391 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 TM9SF3Q9HD45 589 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 SAMD4AQ9UPU9 718 aaKnown RBP10.22□□□□□ -0.77
SMC3-201ENST00000361804 PCDHB7Q9Y5E2 793 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 JUNDP17535 347 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 ALOX12P18054 663 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 FPR1P21462 350 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 TCEA1P23193 301 aaKnown RBP10.22□□□□□ -0.77
SMC3-201ENST00000361804 ARHGDIAP52565 204 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 CYP4F8P98187 520 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 IQCCQ4KMZ1 466 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 CERS6Q6ZMG9 384 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 NELL1Q92832 810 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 ZNF566Q969W8 418 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 GTPBP3Q969Y2 492 aaKnown RBP10.22□□□□□ -0.77
SMC3-201ENST00000361804 NRTNQ99748 197 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 KLF16Q9BXK1 252 aaPredicted RBP10.22□□□□□ -0.77
SMC3-201ENST00000361804 TPT1P8Q9HAU6 139 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 TRIM39Q9HCM9 518 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 NECTIN3Q9NQS3 549 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 TRPM5Q9NZQ8 1165 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 OSGIN1Q9UJX0 560 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 FZD4Q9ULV1 537 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 MAN2B2Q9Y2E5 1009 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 GPC6Q9Y625 555 aaPredicted RBP10.22□□□□□ -0.77
SMC3-201ENST00000361804 AP3D1O14617 1153 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 EPN2O95208 641 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 CHRM5P08912 532 aaPredicted RBP10.22□□□□□ -0.77
SMC3-201ENST00000361804 ETFAP13804 333 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 MC1RQ01726 317 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 ILF2Q12905 390 aaKnown RBP10.22□□□□□ -0.77
SMC3-201ENST00000361804 TIGD6Q17RP2 521 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 MMP21Q8N119 569 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 SETD9Q8NE22 299 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 RHOXF1Q8NHV9 184 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 APOL4Q9BPW4 351 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 KCNS3Q9BQ31 491 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 FBXO8Q9NRD0 319 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 TMEM161AQ9NX61 479 aa10.22□□□□□ -0.77
SMC3-201ENST00000361804 INHAP05111 366 aa10.21□□□□□ -0.77
SMC3-201ENST00000361804 SPAM1P38567 509 aa10.21□□□□□ -0.77
SMC3-201ENST00000361804 PREPP48147 710 aa10.21□□□□□ -0.77
SMC3-201ENST00000361804 AGAP7PQ5VUJ5 663 aa10.21□□□□□ -0.77
SMC3-201ENST00000361804 FRG2Q64ET8 278 aa10.21□□□□□ -0.77
SMC3-201ENST00000361804 DESI1Q6ICB0 168 aa10.21□□□□□ -0.77
SMC3-201ENST00000361804 P3H2Q8IVL5 708 aa10.21□□□□□ -0.77
SMC3-201ENST00000361804 FRG2BQ96QU4 278 aa10.21□□□□□ -0.77
SMC3-201ENST00000361804 CORO1BQ9BR76 489 aa10.21□□□□□ -0.77
SMC3-201ENST00000361804 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.21□□□□□ -0.77
SMC3-201ENST00000361804 MTG2Q9H4K7 406 aa10.21□□□□□ -0.77
SMC3-201ENST00000361804 ZNF334Q9HCZ1 680 aaPredicted RBP10.21□□□□□ -0.77
SMC3-201ENST00000361804 SH3BP4Q9P0V3 963 aa10.21□□□□□ -0.77
SMC3-201ENST00000361804 PCDHGB1Q9Y5G3 927 aa10.21□□□□□ -0.77
SMC3-201ENST00000361804 SPENQ96T58 3664 aaKnown RBP10.21□□□□□ -0.77
SMC3-201ENST00000361804 CXCL10P02778 98 aa10.21□□□□□ -0.78
SMC3-201ENST00000361804 IGFBP1P08833 259 aaPredicted RBP10.21□□□□□ -0.78
SMC3-201ENST00000361804 FEN1P39748 380 aaKnown RBP10.21□□□□□ -0.78
SMC3-201ENST00000361804 CDH12P55289 794 aa10.21□□□□□ -0.78
SMC3-201ENST00000361804 KCNJ10P78508 379 aa10.21□□□□□ -0.78
SMC3-201ENST00000361804 PTSQ03393 145 aa10.21□□□□□ -0.78
SMC3-201ENST00000361804 DUOXA1Q1HG43 343 aa10.21□□□□□ -0.78
SMC3-201ENST00000361804 ATAD3BQ5T9A4 648 aa10.21□□□□□ -0.78
SMC3-201ENST00000361804 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.21□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms