RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 SLC15A5A6NIM6 579 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 RCBTB2O95199 551 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 NDST3O95803 873 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 GHRHRQ02643 423 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 DHCR24Q15392 516 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 FBXO48Q5FWF7 155 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 FSTL4Q6MZW2 842 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 ZNF767PQ75MW2 155 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 OTOP1Q7RTM1 612 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 MFSD3Q96ES6 412 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 DGAT2Q96PD7 388 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 HBEGFQ99075 208 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 SLC5A7Q9GZV3 580 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 TEX13DA0A0J9YY54 714 aaPredicted RBP12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 F8W036 122 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 E2F3O00716 465 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 SLC16A8O95907 504 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 C1RP00736 705 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 BLOC1S1P78537 153 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 ZNF101Q8IZC7 436 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 BANPQ8N9N5 519 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 ZMIZ2Q8NF64 920 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 FBXL20Q96IG2 436 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 UCK2Q9BZX2 261 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 DIP2AQ14689 1571 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 ABCA6Q8N139 1617 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 DLSTP36957 453 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 ZNF41P51814 821 aaPredicted RBP12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 PRMT2P55345 433 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 PTGR1Q14914 329 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 LY6KQ17RY6 165 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 CELF3Q5SZQ8 465 aaKnown RBP12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 SH3PXD2AQ5TCZ1 1133 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 Q8N402 240 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 FAM110BQ8TC76 370 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 SLC13A3Q8WWT9 602 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 TLR6Q9Y2C9 796 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 PPRC1Q5VV67 1664 aaKnown RBP12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 FKTNO75072 461 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 SNRPD2P62316 118 aaKnown RBP12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 RAB31Q13636 194 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 MELKQ14680 651 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 WSCD1Q658N2 575 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 RHBDF2Q6PJF5 856 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 HFE2Q6ZVN8 426 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 TM9SF4Q92544 642 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 TMEM209Q96SK2 561 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 B4GALT7Q9UBV7 327 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 BAZ2AQ9UIF9 1905 aaKnown RBP12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 OR6C6A6NF89 314 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 ZNF705FA8MVS1 300 aaPredicted RBP12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 GPR89AB7ZAQ6 455 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 GPR89BP0CG08 455 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 ZNF705DP0CH99 300 aaPredicted RBP12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 ZNF705BP0CI00 300 aaPredicted RBP12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 LAS2Q8IYD9 372 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 PCDHB18PQ96TA0 734 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 QPCTLQ9NXS2 382 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 PCDHGA8Q9Y5G5 932 aa12.86□□□□□ -0.35
SRGAP3-201ENST00000360413 MADDQ8WXG6 1647 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 TMEM150BA6NC51 233 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 OR6C74A6NCV1 312 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 TISP43B9A030 160 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 SLC19A2O60779 497 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 GLUD2P49448 558 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 SCGB2A2Q13296 93 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 CAMKVQ8NCB2 501 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 PROKR2Q8NFJ6 384 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 RPLP0P6Q8NHW5 317 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 TBC1D15Q8TC07 691 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 HAPLN3Q96S86 360 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 PCDHGA2Q9Y5H1 932 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 SYN3O14994 580 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 ADH6P28332 368 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 RFTN1Q14699 578 aaPredicted RBP12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 TMCO2Q7Z6W1 182 aaPredicted RBP12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 OSTF1Q92882 214 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 STRADBQ9C0K7 418 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 AGO3Q9H9G7 860 aaKnown RBP12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 IFNGR1P15260 489 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 AHCYP23526 432 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 HNRNPH3P31942 346 aaKnown RBP12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 FOXN2P32314 431 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 NRIP1P48552 1158 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 SF3B4Q15427 424 aaKnown RBP eCLIP12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 MEP1AQ16819 746 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 TATDN1Q6P1N9 297 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 FAM198BQ6UWH4 519 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 FAM86B1Q8N7N1 296 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 GLIS3Q8NEA6 775 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 OR14C36Q8NHC7 312 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 WFIKKN2Q8TEU8 576 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 PBDC1Q9BVG4 233 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 P2RX2Q9UBL9 471 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 HEATR1Q9H583 2144 aaKnown RBP12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 SGCEO43556 437 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 CHRNB4P30926 498 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 MRPS5P82675 430 aaKnown RBP12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 TSPAN33Q86UF1 283 aa12.85□□□□□ -0.35
SRGAP3-201ENST00000360413 TP63Q9H3D4 680 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms