RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 ORAI3Q9BRQ5 295 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 TFB2MQ9H5Q4 396 aaKnown RBP15.6■□□□□ 0.09
COL18A1-203ENST00000359759 PREBQ9HCU5 417 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 RNF6Q9Y252 685 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 HEBP2Q9Y5Z4 205 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 HSPA12AO43301 675 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 IFNA2P01563 188 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 CD72P21854 359 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 L1CAMP32004 1257 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 GRIA1P42261 906 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 SLC44A3Q8N4M1 653 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 ANKHQ9HCJ1 492 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 SERINC1Q9NRX5 453 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 PADI3Q9ULW8 664 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 A0A1W2PPK0 400 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 TMEM150CB9EJG8 249 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 SCDO00767 359 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 HERV-K104P61576 105 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 DUOXA1Q1HG43 343 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 USP50Q70EL3 339 aaPredicted RBP15.6■□□□□ 0.09
COL18A1-203ENST00000359759 RASGRP3Q8IV61 690 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 MFSD2AQ8NA29 543 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 SMG8Q8ND04 991 aaKnown RBP15.6■□□□□ 0.09
COL18A1-203ENST00000359759 S100A16Q96FQ6 103 aaKnown RBP15.6■□□□□ 0.09
COL18A1-203ENST00000359759 TMEM41AQ96HV5 264 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 BRF2Q9HAW0 419 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 OXSMQ9NWU1 459 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 RPH3AQ9Y2J0 694 aaPredicted RBP15.6■□□□□ 0.09
COL18A1-203ENST00000359759 MYBPHLA2RUH7 354 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 CLIC3O95833 236 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 HSD3B1P14060 373 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 PAX3P23760 479 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 MSX1P28360 303 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 SEMA3AQ14563 771 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 CENPSQ8N2Z9 138 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 SHKBP1Q8TBC3 707 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 IL36AQ9UHA7 158 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 KCNS2Q9ULS6 477 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 SLC22A14Q9Y267 594 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 A0A1W2PPL8 197 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 M0R233 179 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 GPR25O00155 361 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 ERI3O43414 337 aaKnown RBP15.6■□□□□ 0.09
COL18A1-203ENST00000359759 MAFKO60675 156 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 TRAPPC6AO75865 159 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 HTR1AP08908 422 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 GLDCP23378 1020 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 YBEYP58557 167 aaPredicted RBP15.6■□□□□ 0.09
COL18A1-203ENST00000359759 RHBDL3P58872 404 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 SEC23BQ15437 767 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 PIAS4Q8N2W9 510 aaPredicted RBP15.6■□□□□ 0.09
COL18A1-203ENST00000359759 OR5T1Q8NG75 326 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 MFSD8Q8NHS3 518 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 EIF5A2Q9GZV4 153 aaKnown RBP15.6■□□□□ 0.09
COL18A1-203ENST00000359759 CD320Q9NPF0 282 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 DTLQ9NZJ0 730 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 PCDHA2Q9Y5H9 948 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 DEPDC5O75140 1603 aa15.6■□□□□ 0.09
COL18A1-203ENST00000359759 C2CD4BA6NLJ0 364 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 LDB2O43679 373 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 SFT2D3Q587I9 215 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 EIF5AL1Q6IS14 154 aaKnown RBP15.59■□□□□ 0.09
COL18A1-203ENST00000359759 RGMAQ96B86 450 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 TPT1P8Q9HAU6 139 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 WDR37Q9Y2I8 494 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 OTOL1A6NHN0 477 aaPredicted RBP15.59■□□□□ 0.09
COL18A1-203ENST00000359759 DGKGP49619 791 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 PIGFQ07326 219 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 GARNL3Q5VVW2 1013 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 CEACAM20Q6UY09 585 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 SCAMP5Q8TAC9 235 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 CYB5D2Q8WUJ1 264 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 HSH2DQ96JZ2 352 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 MS4A12Q9NXJ0 267 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 HCN2Q9UL51 889 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 PCDHGB1Q9Y5G3 927 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 MUSKO15146 869 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 BCKDHAP12694 445 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 ACADVLP49748 655 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 EEFSECP57772 596 aaKnown RBP15.59■□□□□ 0.09
COL18A1-203ENST00000359759 DEFB115Q30KQ5 88 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 NKAPLQ5M9Q1 402 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 SLC6A7Q99884 636 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 GTPBP2Q9BX10 602 aaKnown RBP15.59■□□□□ 0.09
COL18A1-203ENST00000359759 TMEM185BQ9H7F4 350 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 TAS2R10Q9NYW0 307 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 LAMP5Q9UJQ1 280 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 KIF20BQ96Q89 1820 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 HAS3O00219 553 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 HLA-DQB2P05538 268 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 C8BP07358 591 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 GNRHRP30968 328 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 MAP2K4P45985 399 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 SMARCD2Q92925 531 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 KLRF1Q9NZS2 232 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 STXBP5LQ9Y2K9 1186 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 MAB21L2Q9Y586 359 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 LRRIQ1Q96JM4 1722 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 PI15O43692 258 aa15.59■□□□□ 0.09
COL18A1-203ENST00000359759 PLATP00750 562 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms