RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 CHCHD4Q8N4Q1 142 aa11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 MFSD9Q8NBP5 474 aa11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 OR7G3Q8NG95 312 aa11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 UBE2E3Q969T4 207 aa11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 THAP11Q96EK4 314 aa11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 OR2A5Q96R48 311 aa11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 SLC29A3Q9BZD2 475 aa11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 SHCBP1LQ9BZQ2 653 aa11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 RHBGQ9H310 441 aa11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 ZDHHC2Q9UIJ5 367 aa11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 RAP2CQ9Y3L5 183 aa11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 TSC22D4Q9Y3Q8 395 aa11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 PCDHGA11Q9Y5H2 935 aa11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 KNTC1P50748 2209 aa11.88□□□□□ -0.51
NIF3L1-201ENST00000359683 HGSO14964 777 aaPredicted RBP11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 AZIN1O14977 448 aa11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 OR1F1O43749 312 aa11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 CAPN1P07384 714 aa11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 AHRP35869 848 aa11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 ARL1P40616 181 aaPredicted RBP11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 BCL6P41182 706 aa11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 ARL4DP49703 201 aa11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 GYS2P54840 703 aa11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 FOXA1P55317 472 aa11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 C16orf72Q14CZ0 275 aa11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 RBBP5Q15291 538 aaKnown RBP11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 ZRSR2Q15696 482 aaKnown RBP11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 UGT3A2Q3SY77 523 aa11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 HES3Q5TGS1 186 aa11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 MYLK4Q86YV6 388 aaPredicted RBP11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 MCATQ8IVS2 390 aaKnown RBP11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 TBC1D19Q8N5T2 526 aa11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 CDYL2Q8N8U2 506 aa11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 ANKRD53Q8N9V6 530 aa11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 RCBTB1Q8NDN9 531 aa11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 WDR20Q8TBZ3 569 aa11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 METTL6Q8TCB7 284 aa11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 ADAMTS14Q8WXS8 1223 aa11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 PRR11Q96HE9 360 aaPredicted RBP11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 SEC16BQ96JE7 1060 aa11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 C7orf26Q96N11 449 aa11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 FCRL4Q96PJ5 515 aa11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 ZFYVE21Q9BQ24 234 aa11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 SYNPO2LQ9H987 977 aa11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 ENAMQ9NRM1 1142 aa11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 SOHLH2Q9NX45 425 aa11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 CLCA2Q9UQC9 943 aa11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 TRAF6Q9Y4K3 522 aa11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 PCDHGA4Q9Y5G9 962 aa11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 MDC1Q14676 2089 aaKnown RBP11.87□□□□□ -0.51
NIF3L1-201ENST00000359683 A0A0J9YVX5 310 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 POLR3GO15318 223 aaPredicted RBP11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 HCRTR1O43613 425 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 SRPX2O60687 465 aaPredicted RBP11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 UROSP10746 265 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 FOLR1P15328 257 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 GSTM2P28161 218 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 MLLT3P42568 568 aaPredicted RBP11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 CLDN6P56747 220 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 TMTC4Q5T4D3 741 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 C10orf62Q5T681 223 aaPredicted RBP11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 KANK2Q63ZY3 851 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 TTC19Q6DKK2 380 aaPredicted RBP11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 TMPRSS12Q86WS5 348 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 KIRREL3Q8IZU9 778 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 ZNF781Q8N8C0 355 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 AGBL5Q8NDL9 886 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 TTLQ8NG68 377 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 REPS1Q96D71 796 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 TM4SF19Q96DZ7 209 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 ZNF285Q96NJ3 590 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 DEPDC7Q96QD5 511 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 KCNA7Q96RP8 456 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 SLCO1B3Q9NPD5 702 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 SIDT1Q9NXL6 827 aaKnown RBP11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 ADGRE2Q9UHX3 823 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 ZFP69BQ9UJL9 534 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 SNX6Q9UNH7 406 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 PLCL2Q9UPR0 1127 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 TIMM22Q9Y584 194 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 AP1M2Q9Y6Q5 423 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 CEP295Q9C0D2 2601 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 LOC105369274A0A096LPK9 316 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 LOC102723532A0A0G2JNH3 316 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 SERTM1A2A2V5 107 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 TCP11X1B4DZS4 312 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 H0YGG7 62 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 MANBAO00462 879 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 FFAR3O14843 346 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 GPR42O15529 346 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 CSO75390 466 aaKnown RBP11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 KRT6AP02538 564 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 KRT6BP04259 564 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 SERPINB3P29508 390 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 HMOX2P30519 316 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 CSTF2P33240 577 aaKnown RBP eCLIP11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 PIK3CBP42338 1070 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 KRT6CP48668 564 aa11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 RPL14P50914 215 aaKnown RBP11.86□□□□□ -0.51
NIF3L1-201ENST00000359683 ARF3P61204 181 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms