RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 GOLM1Q8NBJ4 401 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 CHST14Q8NCH0 376 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 FAM110BQ8TC76 370 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 APIPQ96GX9 242 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 FERD3LQ96RJ6 166 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 FAM118AQ9NWS6 357 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 CD300AQ9UGN4 299 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 CEPT1Q9Y6K0 416 aa11.88□□□□□ -0.51
COL20A1-201ENST00000358894 TSPAN19P0C672 248 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 SMIM18P0DKX4 95 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 PTPN2P17706 415 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 FPR1P21462 350 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 CTSOP43234 321 aaPredicted RBP11.87□□□□□ -0.51
COL20A1-201ENST00000358894 PSMD8P48556 350 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 UGT2B15P54855 530 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 TEAD4Q15561 434 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 TEAD2Q15562 447 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 ANKDD1AQ495B1 522 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 BRAT1Q6PJG6 821 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 ZNF783Q6ZMS7 281 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 CLSTN3Q9BQT9 956 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 HDHD2Q9H0R4 259 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 C11orf16Q9NQ32 467 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 TDP1Q9NUW8 608 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 OLAHQ9NV23 265 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 ASB1Q9Y576 335 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 PCDHGB3Q9Y5G1 929 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 BACE2Q9Y5Z0 518 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 MYO10Q9HD67 2058 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 A0A1W2PRB8 838 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 VILLO15195 856 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 CCSAPQ6IQ19 270 aaPredicted RBP11.87□□□□□ -0.51
COL20A1-201ENST00000358894 CARM1Q86X55 608 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 GPR65Q8IYL9 337 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 LGI4Q8N135 537 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 RNF175Q8N4F7 328 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 PDPRQ8NCN5 879 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 LKAAEAR1Q8TD35 194 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 NETO1Q8TDF5 533 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 BIRC8Q96P09 236 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 MARCH5Q9NX47 278 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 ZNF282Q9UDV7 671 aaPredicted RBP11.87□□□□□ -0.51
COL20A1-201ENST00000358894 GPSM3Q9Y4H4 160 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 LYVE1Q9Y5Y7 322 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 ADH1CP00326 375 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 PRNPP04156 253 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 PCCBP05166 539 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 HLA-EP13747 358 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 PCSK6P29122 969 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 MAP2K4P45985 399 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 HK3P52790 923 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 VBP1P61758 197 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.87□□□□□ -0.51
COL20A1-201ENST00000358894 CD47Q08722 323 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 GRM2Q14416 872 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 ATG9BQ674R7 924 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 C16orf62Q7Z3J2 963 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 TMEM25Q86YD3 366 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 ARMC8Q8IUR7 673 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 ELMOD2Q8IZ81 293 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 IL4I1Q96RQ9 567 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 PKP4Q99569 1192 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 AIF1LQ9BQI0 150 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 FNDC11Q9BVV2 318 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 DUS2Q9NX74 493 aaKnown RBP11.87□□□□□ -0.51
COL20A1-201ENST00000358894 GPRC5BQ9NZH0 403 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 AASSQ9UDR5 926 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 RWDD3Q9Y3V2 267 aa11.87□□□□□ -0.51
COL20A1-201ENST00000358894 A0A096LPI6 279 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 EFCAB9A8MZ26 197 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 GADD45GO95257 159 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 PRAMEF12O95522 483 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 STATHP02808 62 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 VIPR1P32241 457 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 KDELR2P33947 212 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 SCARB2Q14108 478 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 VMACQ2NL98 169 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 WDR45BQ5MNZ6 344 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 IQCF2Q8IXL9 164 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 SMG7Q92540 1137 aaKnown RBP11.86□□□□□ -0.51
COL20A1-201ENST00000358894 KLK6Q92876 244 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 SEMA3GQ9NS98 782 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 THG1LQ9NWX6 298 aaKnown RBP11.86□□□□□ -0.51
COL20A1-201ENST00000358894 DLGAP4Q9Y2H0 992 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 ISM1B1AKI9 464 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 AREL1O15033 823 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 FGF18O76093 207 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 ITIH1P19827 911 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 GSTM5P46439 218 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 CLDN8P56748 225 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 TUBA3CQ13748 450 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 DOC2AQ14183 400 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.86□□□□□ -0.51
COL20A1-201ENST00000358894 NPAS3Q8IXF0 933 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 TMEM151AQ8N4L1 468 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 GALNT6Q8NCL4 622 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 RAD51AP1Q96B01 352 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 ZSCAN5AQ9BUG6 496 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 GULP1Q9UBP9 304 aa11.86□□□□□ -0.51
COL20A1-201ENST00000358894 DPP7Q9UHL4 492 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms