RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 SEC14L3Q9UDX4 400 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 UBIAD1Q9Y5Z9 338 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 PPLO60437 1756 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 TTLL8A6PVC2 850 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 SMLR1H3BR10 107 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 MT-ND5P03915 603 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 MAGEA6P43360 314 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 NUMBP49757 651 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 SKP1P63208 163 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 DPYSL2Q16555 572 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 LRIT3Q3SXY7 679 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 IDO2Q6ZQW0 420 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 TMEM74Q96NL1 305 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 EBPLQ9BY08 206 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 ZBTB20Q9HC78 741 aaPredicted RBP5.91□□□□□ -1.46
VPS13B-203ENST00000358544 ASB4Q9Y574 426 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 TLR5O60602 858 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 SULT1C4O75897 302 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 GOT2P00505 430 aaKnown RBP5.91□□□□□ -1.46
VPS13B-203ENST00000358544 PEA15Q15121 130 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 TATDN3Q17R31 274 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 ZNF630Q2M218 657 aaPredicted RBP5.91□□□□□ -1.46
VPS13B-203ENST00000358544 NHSL2Q5HYW2 709 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 TAPT1Q6NXT6 567 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 SMAP2Q8WU79 429 aaPredicted RBP5.91□□□□□ -1.46
VPS13B-203ENST00000358544 MAP6Q96JE9 813 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 SLC35A5Q9BS91 424 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 APOBEC3GQ9HC16 384 aaKnown RBP5.91□□□□□ -1.46
VPS13B-203ENST00000358544 KLHL21Q9UJP4 597 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 ESR1P03372 595 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 CTSHP09668 335 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 CKMT1AP12532 417 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 GUCA1AP43080 201 aaPredicted RBP5.91□□□□□ -1.46
VPS13B-203ENST00000358544 FLI1Q01543 452 aaPredicted RBP5.91□□□□□ -1.46
VPS13B-203ENST00000358544 BCL2L15Q5TBC7 163 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 ZCCHC12Q6PEW1 402 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 DGLUCYQ7Z3D6 616 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 ARMC10Q8N2F6 343 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 CARS2Q9HA77 564 aaKnown RBP5.91□□□□□ -1.46
VPS13B-203ENST00000358544 B3GNT2Q9NY97 397 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 TRPV2Q9Y5S1 764 aa5.91□□□□□ -1.46
VPS13B-203ENST00000358544 A0A075B6Q4 140 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 ITGAMP11215 1152 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 FBXO48Q5FWF7 155 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 PPP1R26Q5T8A7 1209 aaPredicted RBP5.9□□□□□ -1.46
VPS13B-203ENST00000358544 MEDAGQ5VYS4 303 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 MINDY1Q8N5J2 469 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 SLC39A13Q96H72 371 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 CAMK1GQ96NX5 476 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 S100A13Q99584 98 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 SYT4Q9H2B2 425 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 BPIFA1Q9NP55 256 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 AIG1Q9NVV5 245 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 KCTD5Q9NXV2 234 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 BOLA1Q9Y3E2 137 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 TOR1AO14656 332 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 RAB36O95755 333 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 CXCR2P25025 360 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 ABHD18Q0P651 414 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 DYRK1AQ13627 763 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 BTG3Q14201 252 aaPredicted RBP5.9□□□□□ -1.46
VPS13B-203ENST00000358544 NAPRTQ6XQN6 538 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 CEP97Q8IW35 865 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 XAGE5Q8WWM1 108 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 DPYSL5Q9BPU6 564 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.9□□□□□ -1.46
VPS13B-203ENST00000358544 QRSL1Q9H0R6 528 aaKnown RBP5.9□□□□□ -1.46
VPS13B-203ENST00000358544 RPH3AQ9Y2J0 694 aaPredicted RBP5.9□□□□□ -1.46
VPS13B-203ENST00000358544 EXOSC1Q9Y3B2 195 aaKnown RBP5.9□□□□□ -1.46
VPS13B-203ENST00000358544 CNTNAP4Q9C0A0 1308 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 TRBC2A0A5B9 178 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 POLR1CO15160 346 aaPredicted RBP5.9□□□□□ -1.46
VPS13B-203ENST00000358544 ZNF780AO75290 641 aaPredicted RBP5.9□□□□□ -1.46
VPS13B-203ENST00000358544 MC4RP32245 332 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 VSX2P58304 361 aaPredicted RBP5.9□□□□□ -1.46
VPS13B-203ENST00000358544 RPP38P78345 283 aaKnown RBP5.9□□□□□ -1.46
VPS13B-203ENST00000358544 ZNF697Q5TEC3 545 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 ATG9BQ674R7 924 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 SPATC1Q76KD6 591 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 SLC22A17Q8WUG5 538 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 KLHL6Q8WZ60 621 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 CLP1Q92989 425 aaKnown RBP5.9□□□□□ -1.46
VPS13B-203ENST00000358544 C3orf49Q96BT1 292 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 TNFRSF10DQ9UBN6 386 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 C19orf81C9J6K1 198 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 PIK3CBP42338 1070 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 SF3B4Q15427 424 aaKnown RBP eCLIP5.9□□□□□ -1.46
VPS13B-203ENST00000358544 KLHL26Q53HC5 615 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 SLC22A10Q63ZE4 541 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 ALG1LQ6GMV1 187 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 PIM3Q86V86 326 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 SIGLEC10Q96LC7 697 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 NELL2Q99435 816 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 ZNF700Q9H0M5 742 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 TPT1P8Q9HAU6 139 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 GADD45GO95257 159 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 PRPS1L1P21108 318 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 ARHGDIBP52566 201 aa5.9□□□□□ -1.46
VPS13B-203ENST00000358544 SLC25A11Q02978 314 aaKnown RBP5.9□□□□□ -1.46
VPS13B-203ENST00000358544 NPRL3Q12980 569 aa5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms