RNA–Protein interactions for RNA: ENST00000357008.6

CHD4-201, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD4, Length 6,496 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-201ENST00000357008 A0A0G2JN53 185 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 TTC24A2A3L6 582 aaPredicted RBP14.42□□□□□ -0.1
CHD4-201ENST00000357008 ATP5A1P25705 553 aaKnown RBP14.42□□□□□ -0.1
CHD4-201ENST00000357008 ERP29P30040 261 aaKnown RBP14.42□□□□□ -0.1
CHD4-201ENST00000357008 MPP2Q14168 576 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 GPR68Q15743 365 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 C1orf189Q5VU69 101 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 KCNA7Q96RP8 456 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 ZSCAN5AQ9BUG6 496 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 ENAMQ9NRM1 1142 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 MGAT4BQ9UQ53 548 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 HS3ST4Q9Y661 456 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 ANKRD66B4E2M5 251 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 BTBD19C9JJ37 291 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 SEPT4O43236 478 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 RASAL1O95294 804 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 TBX18O95935 607 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 IFNA21P01568 189 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 PTPN2P17706 415 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 FSHRP23945 695 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 ELK4P28324 431 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 TAS2R43P59537 309 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 SEMG2Q02383 582 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 FAM189A2Q15884 450 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 NANOGP8Q6NSW7 305 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 SNX29P2Q8IUI4 249 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 DRAXINQ8NBI3 349 aaPredicted RBP14.42□□□□□ -0.1
CHD4-201ENST00000357008 TMEM145Q8NBT3 493 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 PROKR2Q8NFJ6 384 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 CCM2Q9BSQ5 444 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 NANOGQ9H9S0 305 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 PLCL2Q9UPR0 1127 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 H0YJX3 145 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 CDC40O60508 579 aaKnown RBP eCLIP14.42□□□□□ -0.13e-6■■■□□ 18.9
CHD4-201ENST00000357008 HPRP00739 348 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 S100A2P29034 98 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 KCNAB2Q13303 367 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 RAB12Q6IQ22 244 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 PLD6Q8N2A8 252 aaKnown RBP14.42□□□□□ -0.1
CHD4-201ENST00000357008 PLEKHO2Q8TD55 490 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 ADAD1Q96M93 576 aaKnown RBP14.42□□□□□ -0.1
CHD4-201ENST00000357008 EXOSC1Q9Y3B2 195 aaKnown RBP14.42□□□□□ -0.1
CHD4-201ENST00000357008 J3QLW9 94 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 CSN2P05814 226 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 ATP1B2P14415 290 aaPredicted RBP14.42□□□□□ -0.1
CHD4-201ENST00000357008 ZNF19P17023 458 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 GRK5P34947 590 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 ERVK-21P61565 698 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 LRRC73Q5JTD7 316 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 SLC22A15Q8IZD6 547 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 OR8J3Q8NGG0 315 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 OR10Q1Q8NGQ4 319 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 NUS1Q96E22 293 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 SMOC2Q9H3U7 446 aa14.42□□□□□ -0.1
CHD4-201ENST00000357008 ZNF208O43345 1280 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 LCN1P31025 176 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 LRRC32Q14392 662 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 ZNF181Q2M3W8 571 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 C6orf141Q5SZD1 244 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 GDPD4Q6W3E5 623 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 SLC36A4Q6YBV0 504 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 HFE2Q6ZVN8 426 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 TXNDC5Q8NBS9 432 aaKnown RBP14.41□□□□□ -0.1
CHD4-201ENST00000357008 DDX1Q92499 740 aaKnown RBP14.41□□□□□ -0.1
CHD4-201ENST00000357008 BIRC8Q96P09 236 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 SNAP29O95721 258 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 PROZP22891 400 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 PGDP52209 483 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 PON3Q15166 354 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 ZNF423Q2M1K9 1284 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 GFOD2Q3B7J2 385 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 SLC39A4Q6P5W5 647 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 ZC3H3Q8IXZ2 948 aaKnown RBP14.41□□□□□ -0.1
CHD4-201ENST00000357008 LSM14AQ8ND56 463 aaKnown RBP14.41□□□□□ -0.1
CHD4-201ENST00000357008 NXPE2Q96DL1 559 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 TSSK6Q9BXA6 273 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 ZNF696Q9H7X3 374 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 TIGARQ9NQ88 270 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 ADAMTS6Q9UKP5 1117 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 USP2O75604 605 aaPredicted RBP14.41□□□□□ -0.1
CHD4-201ENST00000357008 MEDAGQ5VYS4 303 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 RPS27LQ71UM5 84 aaKnown RBP14.41□□□□□ -0.1
CHD4-201ENST00000357008 ZNF367Q7RTV3 350 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 PNLDC1Q8NA58 520 aaKnown RBP14.41□□□□□ -0.1
CHD4-201ENST00000357008 CCDC54Q8NEL0 328 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 SETD6Q8TBK2 473 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 HIST1H2AAQ96QV6 131 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 RIOK2Q9BVS4 552 aaKnown RBP14.41□□□□□ -0.1
CHD4-201ENST00000357008 METTL8Q9H825 291 aaKnown RBP14.41□□□□□ -0.1
CHD4-201ENST00000357008 FBXO9Q9UK97 447 aaPredicted RBP14.41□□□□□ -0.1
CHD4-201ENST00000357008 INMT-MINDY4F8WBC2 141 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 GDF5P43026 501 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 OLIG2Q13516 323 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 SCGB2B2Q4G0G5 96 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 IFNLR1Q8IU57 520 aaPredicted RBP14.41□□□□□ -0.1
CHD4-201ENST00000357008 GRHL3Q8TE85 626 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 WFIKKN2Q8TEU8 576 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 DPEP2Q9H4A9 486 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 TLE6Q9H808 572 aa14.41□□□□□ -0.1
CHD4-201ENST00000357008 MAB21L2Q9Y586 359 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms