RNA–Protein interactions for RNA: ENST00000356146.5

CDKL1-202, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 1 (best)

Gene CDKL1, Length 2,982 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-202ENST00000356146 OR4C15Q8NGM1 316 aa13.23□□□□□ -0.29
CDKL1-202ENST00000356146 CCDC32Q9BV29 185 aa13.23□□□□□ -0.29
CDKL1-202ENST00000356146 DNAJC11Q9NVH1 559 aa13.23□□□□□ -0.29
CDKL1-202ENST00000356146 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP13.23□□□□□ -0.29
CDKL1-202ENST00000356146 RUVBL1Q9Y265 456 aaKnown RBP13.23□□□□□ -0.29
CDKL1-202ENST00000356146 PLXNB3Q9ULL4 1909 aa13.22□□□□□ -0.29
CDKL1-202ENST00000356146 LOC110117498-PIK3R3F6TDL0 507 aa13.22□□□□□ -0.29
CDKL1-202ENST00000356146 CLDN7O95471 211 aa13.22□□□□□ -0.29
CDKL1-202ENST00000356146 HSD3B1P14060 373 aa13.22□□□□□ -0.29
CDKL1-202ENST00000356146 ZNF24P17028 368 aa13.22□□□□□ -0.29
CDKL1-202ENST00000356146 HSD3B2P26439 372 aa13.22□□□□□ -0.29
CDKL1-202ENST00000356146 GJA8P48165 433 aa13.22□□□□□ -0.29
CDKL1-202ENST00000356146 TUFMP49411 452 aaKnown RBP13.22□□□□□ -0.29
CDKL1-202ENST00000356146 DEFA1P59665 94 aa13.22□□□□□ -0.29
CDKL1-202ENST00000356146 DEFA3P59666 94 aa13.22□□□□□ -0.29
CDKL1-202ENST00000356146 BCL2L1Q07817 233 aa13.22□□□□□ -0.29
CDKL1-202ENST00000356146 ZNF621Q6ZSS3 439 aa13.22□□□□□ -0.29
CDKL1-202ENST00000356146 TSEN54Q7Z6J9 526 aaKnown RBP13.22□□□□□ -0.29
CDKL1-202ENST00000356146 PIK3R3Q92569 461 aa13.22□□□□□ -0.29
CDKL1-202ENST00000356146 YIPF2Q9BWQ6 316 aa13.22□□□□□ -0.29
CDKL1-202ENST00000356146 C6orf62Q9GZU0 229 aaPredicted RBP13.22□□□□□ -0.29
CDKL1-202ENST00000356146 TRMT13Q9NUP7 481 aaKnown RBP13.22□□□□□ -0.29
CDKL1-202ENST00000356146 SPATA6Q9NWH7 488 aaPredicted RBP13.22□□□□□ -0.29
CDKL1-202ENST00000356146 TRAPPC4Q9Y296 219 aa13.22□□□□□ -0.29
CDKL1-202ENST00000356146 GFYI3L273 518 aa13.22□□□□□ -0.29
CDKL1-202ENST00000356146 PRAMEF4O60810 478 aa13.22□□□□□ -0.29
CDKL1-202ENST00000356146 DLGAP3O95886 979 aa13.22□□□□□ -0.29
CDKL1-202ENST00000356146 C1QCP02747 245 aa13.22□□□□□ -0.29
CDKL1-202ENST00000356146 CKBP12277 381 aa13.22□□□□□ -0.29
CDKL1-202ENST00000356146 COX7A2P14406 83 aa13.22□□□□□ -0.29
CDKL1-202ENST00000356146 RRM2P31350 389 aa13.22□□□□□ -0.29
CDKL1-202ENST00000356146 RGS6P49758 472 aa13.22□□□□□ -0.29
CDKL1-202ENST00000356146 PCDH1Q08174 1060 aa13.22□□□□□ -0.29
CDKL1-202ENST00000356146 KCNC3Q14003 757 aa13.22□□□□□ -0.29
CDKL1-202ENST00000356146 MBTPS1Q14703 1052 aa13.22□□□□□ -0.29
CDKL1-202ENST00000356146 PTCHD3Q3KNS1 767 aa13.22□□□□□ -0.29
CDKL1-202ENST00000356146 PRAMEF9Q5VWM5 478 aa13.22□□□□□ -0.29
CDKL1-202ENST00000356146 DESI1Q6ICB0 168 aa13.22□□□□□ -0.29
CDKL1-202ENST00000356146 CCDC190Q86UF4 302 aa13.22□□□□□ -0.29
CDKL1-202ENST00000356146 CCDC103Q8IW40 242 aa13.22□□□□□ -0.29
CDKL1-202ENST00000356146 HJURPQ8NCD3 748 aaPredicted RBP13.22□□□□□ -0.29
CDKL1-202ENST00000356146 ATL1Q8WXF7 558 aa13.22□□□□□ -0.29
CDKL1-202ENST00000356146 ZNF486Q96H40 463 aaPredicted RBP13.22□□□□□ -0.29
CDKL1-202ENST00000356146 PCDHGB6Q9Y5F9 930 aa13.22□□□□□ -0.29
CDKL1-202ENST00000356146 KIAA1671Q9BY89 1806 aa13.21□□□□□ -0.29
CDKL1-202ENST00000356146 HIST1H2AGP0C0S8 130 aaPredicted RBP13.21□□□□□ -0.29
CDKL1-202ENST00000356146 HMGA1P17096 107 aaKnown RBP13.21□□□□□ -0.29
CDKL1-202ENST00000356146 HIST1H2ADP20671 130 aa13.21□□□□□ -0.29
CDKL1-202ENST00000356146 CCR7P32248 378 aa13.21□□□□□ -0.29
CDKL1-202ENST00000356146 GRK5P34947 590 aa13.21□□□□□ -0.29
CDKL1-202ENST00000356146 PIK3CBP42338 1070 aa13.21□□□□□ -0.29
CDKL1-202ENST00000356146 TIMM50Q3ZCQ8 353 aa13.21□□□□□ -0.29
CDKL1-202ENST00000356146 C10orf62Q5T681 223 aaPredicted RBP13.21□□□□□ -0.29
CDKL1-202ENST00000356146 GPR153Q6NV75 609 aa13.21□□□□□ -0.29
CDKL1-202ENST00000356146 GALNT10Q86SR1 603 aa13.21□□□□□ -0.29
CDKL1-202ENST00000356146 NLRP8Q86W28 1048 aa13.21□□□□□ -0.29
CDKL1-202ENST00000356146 MMAAQ8IVH4 418 aaKnown RBP13.21□□□□□ -0.29
CDKL1-202ENST00000356146 FAM83FQ8NEG4 500 aaPredicted RBP13.21□□□□□ -0.29
CDKL1-202ENST00000356146 HIST1H2AHQ96KK5 128 aa13.21□□□□□ -0.29
CDKL1-202ENST00000356146 HIST1H2AJQ99878 128 aa13.21□□□□□ -0.29
CDKL1-202ENST00000356146 DPH2Q9BQC3 489 aaPredicted RBP13.21□□□□□ -0.29
CDKL1-202ENST00000356146 H2AFJQ9BTM1 129 aa13.21□□□□□ -0.29
CDKL1-202ENST00000356146 CDCA4Q9BXL8 241 aa13.21□□□□□ -0.29
CDKL1-202ENST00000356146 THSD1Q9NS62 852 aa13.21□□□□□ -0.29
CDKL1-202ENST00000356146 GKN1Q9NS71 199 aa13.21□□□□□ -0.29
CDKL1-202ENST00000356146 A0A075B6Q4 140 aa13.21□□□□□ -0.29
CDKL1-202ENST00000356146 SCAMP2O15127 329 aaKnown RBP13.21□□□□□ -0.29
CDKL1-202ENST00000356146 DBTP11182 482 aaKnown RBP13.21□□□□□ -0.29
CDKL1-202ENST00000356146 ASMTP46597 345 aa13.21□□□□□ -0.29
CDKL1-202ENST00000356146 SELENOWP63302 87 aa13.21□□□□□ -0.29
CDKL1-202ENST00000356146 IFITM2Q01629 132 aa13.21□□□□□ -0.29
CDKL1-202ENST00000356146 PPIGQ13427 754 aaKnown RBP eCLIP13.21□□□□□ -0.29
CDKL1-202ENST00000356146 SLC8B1Q6J4K2 584 aa13.21□□□□□ -0.29
CDKL1-202ENST00000356146 METTL3Q86U44 580 aaKnown RBP13.21□□□□□ -0.29
CDKL1-202ENST00000356146 WDR20Q8TBZ3 569 aa13.21□□□□□ -0.29
CDKL1-202ENST00000356146 COPS8Q99627 209 aa13.21□□□□□ -0.29
CDKL1-202ENST00000356146 ZNF226Q9NYT6 803 aa13.21□□□□□ -0.29
CDKL1-202ENST00000356146 CNOT2Q9NZN8 540 aaKnown RBP13.21□□□□□ -0.29
CDKL1-202ENST00000356146 TRPM5Q9NZQ8 1165 aa13.21□□□□□ -0.29
CDKL1-202ENST00000356146 NDUFAF4Q9P032 175 aa13.21□□□□□ -0.29
CDKL1-202ENST00000356146 CFL2Q9Y281 166 aa13.21□□□□□ -0.29
CDKL1-202ENST00000356146 TNFRSF11BO00300 401 aa13.2□□□□□ -0.3
CDKL1-202ENST00000356146 TBL1XO60907 577 aa13.2□□□□□ -0.3
CDKL1-202ENST00000356146 VIPP01282 170 aa13.2□□□□□ -0.3
CDKL1-202ENST00000356146 SPNP16150 400 aa13.2□□□□□ -0.3
CDKL1-202ENST00000356146 POLR2EP19388 210 aaKnown RBP13.2□□□□□ -0.3
CDKL1-202ENST00000356146 SLC11A1P49279 550 aa13.2□□□□□ -0.3
CDKL1-202ENST00000356146 B4GALNT1Q00973 533 aa13.2□□□□□ -0.3
CDKL1-202ENST00000356146 RGNQ15493 299 aa13.2□□□□□ -0.3
CDKL1-202ENST00000356146 PLEKHS1Q5SXH7 462 aa13.2□□□□□ -0.3
CDKL1-202ENST00000356146 ANXA8L1Q5VT79 327 aa13.2□□□□□ -0.3
CDKL1-202ENST00000356146 RETSATQ6NUM9 610 aa13.2□□□□□ -0.3
CDKL1-202ENST00000356146 KLHDC8AQ8IYD2 350 aa13.2□□□□□ -0.3
CDKL1-202ENST00000356146 C11orf65Q8NCR3 313 aa13.2□□□□□ -0.3
CDKL1-202ENST00000356146 OR10G2Q8NGC3 310 aa13.2□□□□□ -0.3
CDKL1-202ENST00000356146 SETD6Q8TBK2 473 aa13.2□□□□□ -0.3
CDKL1-202ENST00000356146 KCNC2Q96PR1 638 aa13.2□□□□□ -0.3
CDKL1-202ENST00000356146 FEVQ99581 238 aa13.2□□□□□ -0.3
CDKL1-202ENST00000356146 TTPALQ9BTX7 342 aa13.2□□□□□ -0.3
CDKL1-202ENST00000356146 VPS29Q9UBQ0 182 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms