RNA–Protein interactions for RNA: ENST00000355155.5

VPS13B-201, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 2,822 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-201ENST00000355155 TRBC2A0A5B9 178 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 ARPC2O15144 300 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 PCNAP12004 261 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 CLDN2P57739 230 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 SRP54P61011 504 aaKnown RBP16.53■□□□□ 0.24
VPS13B-201ENST00000355155 ZIC1Q15915 447 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 ALG11Q2TAA5 492 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 PTCRAQ6ISU1 281 aaPredicted RBP16.53■□□□□ 0.24
VPS13B-201ENST00000355155 Q6ZS52 159 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 ADCY4Q8NFM4 1077 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 DNAJB14Q8TBM8 379 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 NELL1Q92832 810 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 PDXPQ96GD0 296 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 ZNF717Q9BY31 904 aaPredicted RBP16.53■□□□□ 0.24
VPS13B-201ENST00000355155 TMEM184CQ9NVA4 438 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 OR6C2Q9NZP2 312 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 SCHIP1Q9P0W5 487 aaPredicted RBP16.53■□□□□ 0.24
VPS13B-201ENST00000355155 TAC3Q9UHF0 121 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 EXO1Q9UQ84 846 aaKnown RBP16.53■□□□□ 0.24
VPS13B-201ENST00000355155 PRR23AA6NEV1 266 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 CLEC3AO75596 197 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 FKBP9O95302 570 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 STAMBPO95630 424 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 CD6P30203 668 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 SHMT2P34897 504 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 KIR3DL1P43629 444 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 CSNK1G2P78368 415 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 MRPS22P82650 360 aaKnown RBP16.53■□□□□ 0.24
VPS13B-201ENST00000355155 ZNF763Q0D2J5 394 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 DUOXA1Q1HG43 343 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 FAM71E1Q6IPT2 247 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 ADNP2Q6IQ32 1131 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 ENPP7Q6UWV6 458 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 SLC9B2Q86UD5 537 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 FAM124AQ86V42 546 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 GPR180Q86V85 440 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 DCP2Q8IU60 420 aaKnown RBP16.53■□□□□ 0.24
VPS13B-201ENST00000355155 DNAJC9Q8WXX5 260 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 KCTD14Q9BQ13 255 aaPredicted RBP16.53■□□□□ 0.24
VPS13B-201ENST00000355155 SPATA9Q9BWV2 254 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 IL1RL2Q9HB29 575 aa16.53■□□□□ 0.24
VPS13B-201ENST00000355155 PNMA8BQ9ULN7 279 aaPredicted RBP16.53■□□□□ 0.24
VPS13B-201ENST00000355155 IGKV1-8A0A0C4DH67 115 aa16.52■□□□□ 0.24
VPS13B-201ENST00000355155 FAM221BA6H8Z2 402 aa16.52■□□□□ 0.24
VPS13B-201ENST00000355155 GGT1P19440 569 aa16.52■□□□□ 0.24
VPS13B-201ENST00000355155 RELAQ04206 551 aa16.52■□□□□ 0.24
VPS13B-201ENST00000355155 CYP4F3Q08477 520 aa16.52■□□□□ 0.24
VPS13B-201ENST00000355155 GAS6Q14393 721 aa16.52■□□□□ 0.24
VPS13B-201ENST00000355155 DEPDC1Q5TB30 811 aa16.52■□□□□ 0.24
VPS13B-201ENST00000355155 DUS1LQ6P1R4 473 aaKnown RBP16.52■□□□□ 0.24
VPS13B-201ENST00000355155 NATD1Q8N6N6 113 aa16.52■□□□□ 0.24
VPS13B-201ENST00000355155 HMGB4Q8WW32 186 aa16.52■□□□□ 0.24
VPS13B-201ENST00000355155 SHDQ96IW2 340 aa16.52■□□□□ 0.24
VPS13B-201ENST00000355155 TSSK3Q96PN8 268 aa16.52■□□□□ 0.24
VPS13B-201ENST00000355155 KAT8Q9H7Z6 458 aaKnown RBP16.52■□□□□ 0.24
VPS13B-201ENST00000355155 LMAN1LQ9HAT1 526 aa16.52■□□□□ 0.24
VPS13B-201ENST00000355155 TBC1D29Q9UFV1 150 aa16.52■□□□□ 0.24
VPS13B-201ENST00000355155 AP4S1Q9Y587 144 aa16.52■□□□□ 0.24
VPS13B-201ENST00000355155 MYO9BQ13459 2157 aa16.52■□□□□ 0.24
VPS13B-201ENST00000355155 RNASET2O00584 256 aaKnown RBP16.52■□□□□ 0.23
VPS13B-201ENST00000355155 DFNA5O60443 496 aa16.52■□□□□ 0.23
VPS13B-201ENST00000355155 ABCB1P08183 1280 aaPredicted RBP16.52■□□□□ 0.23
VPS13B-201ENST00000355155 RPL10P27635 214 aaKnown RBP16.52■□□□□ 0.23
VPS13B-201ENST00000355155 TRA2BP62995 288 aaKnown RBP16.52■□□□□ 0.23
VPS13B-201ENST00000355155 SELPLGQ14242 412 aa16.52■□□□□ 0.23
VPS13B-201ENST00000355155 ANXA8L1Q5VT79 327 aa16.52■□□□□ 0.23
VPS13B-201ENST00000355155 COMMD6Q7Z4G1 85 aa16.52■□□□□ 0.23
VPS13B-201ENST00000355155 PDSS2Q86YH6 399 aa16.52■□□□□ 0.23
VPS13B-201ENST00000355155 LILRA2Q8N149 483 aa16.52■□□□□ 0.23
VPS13B-201ENST00000355155 TMEM132CQ8N3T6 1108 aa16.52■□□□□ 0.23
VPS13B-201ENST00000355155 LMNTD1Q8N9Z9 388 aa16.52■□□□□ 0.23
VPS13B-201ENST00000355155 ZNF548Q8NEK5 533 aaPredicted RBP16.52■□□□□ 0.23
VPS13B-201ENST00000355155 CLDN23Q96B33 292 aa16.52■□□□□ 0.23
VPS13B-201ENST00000355155 RSRC1Q96IZ7 334 aaKnown RBP16.52■□□□□ 0.23
VPS13B-201ENST00000355155 EGLN2Q96KS0 407 aa16.52■□□□□ 0.23
VPS13B-201ENST00000355155 ZNF184Q99676 751 aaPredicted RBP16.52■□□□□ 0.23
VPS13B-201ENST00000355155 C6orf106Q9H6K1 298 aaPredicted RBP16.52■□□□□ 0.23
VPS13B-201ENST00000355155 PRDM8Q9NQV8 689 aa16.52■□□□□ 0.23
VPS13B-201ENST00000355155 OLAHQ9NV23 265 aa16.52■□□□□ 0.23
VPS13B-201ENST00000355155 AHSPQ9NZD4 102 aa16.52■□□□□ 0.23
VPS13B-201ENST00000355155 ANKMY1Q9P2S6 941 aa16.52■□□□□ 0.23
VPS13B-201ENST00000355155 AP1M2Q9Y6Q5 423 aa16.52■□□□□ 0.23
VPS13B-201ENST00000355155 PCDH7O60245 1069 aa16.51■□□□□ 0.23
VPS13B-201ENST00000355155 PEBP1P30086 187 aaKnown RBP16.51■□□□□ 0.23
VPS13B-201ENST00000355155 HPCAL1P37235 193 aa16.51■□□□□ 0.23
VPS13B-201ENST00000355155 ADPRMQ3LIE5 342 aa16.51■□□□□ 0.23
VPS13B-201ENST00000355155 ZNF425Q6IV72 752 aa16.51■□□□□ 0.23
VPS13B-201ENST00000355155 R3HCC1LQ7Z5L2 792 aaKnown RBP16.51■□□□□ 0.23
VPS13B-201ENST00000355155 SPATA24Q86W54 205 aa16.51■□□□□ 0.23
VPS13B-201ENST00000355155 KBTBD2Q8IY47 623 aa16.51■□□□□ 0.23
VPS13B-201ENST00000355155 ADGRG5Q8IZF4 528 aa16.51■□□□□ 0.23
VPS13B-201ENST00000355155 ANKRD53Q8N9V6 530 aa16.51■□□□□ 0.23
VPS13B-201ENST00000355155 NUDT8Q8WV74 236 aa16.51■□□□□ 0.23
VPS13B-201ENST00000355155 GMPR2Q9P2T1 348 aaKnown RBP16.51■□□□□ 0.23
VPS13B-201ENST00000355155 NDRG2Q9UN36 371 aaKnown RBP16.51■□□□□ 0.23
VPS13B-201ENST00000355155 PCDHB14Q9Y5E9 798 aa16.51■□□□□ 0.23
VPS13B-201ENST00000355155 IGHV1OR15-9A0A0B4J2B8 117 aa16.51■□□□□ 0.23
VPS13B-201ENST00000355155 A0A1W2PPC4 97 aa16.51■□□□□ 0.23
VPS13B-201ENST00000355155 C19orf67A6NJJ6 358 aa16.51■□□□□ 0.23
VPS13B-201ENST00000355155 ANXA4P09525 319 aaPredicted RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms