RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 TXNDC5Q8NBS9 432 aaKnown RBP7.82□□□□□ -1.16
HTT-201ENST00000355072 C1orf216Q8TAB5 229 aa7.82□□□□□ -1.16
HTT-201ENST00000355072 LRRC58Q96CX6 371 aa7.82□□□□□ -1.16
HTT-201ENST00000355072 PIP5K1AQ99755 562 aa7.82□□□□□ -1.16
HTT-201ENST00000355072 PIF1Q9H611 641 aa7.82□□□□□ -1.16
HTT-201ENST00000355072 ZFP14Q9HCL3 533 aa7.82□□□□□ -1.16
HTT-201ENST00000355072 FAM212BQ9NTI7 297 aaPredicted RBP7.82□□□□□ -1.16
HTT-201ENST00000355072 BLOC1S4Q9NUP1 217 aa7.82□□□□□ -1.16
HTT-201ENST00000355072 PIM2Q9P1W9 311 aa7.82□□□□□ -1.16
HTT-201ENST00000355072 F5H423 210 aaPredicted RBP7.82□□□□□ -1.16
HTT-201ENST00000355072 NUDT6P53370 316 aa7.82□□□□□ -1.16
HTT-201ENST00000355072 MLLT1Q03111 559 aaPredicted RBP7.82□□□□□ -1.16
HTT-201ENST00000355072 HIST2H3PS2Q5TEC6 136 aa7.82□□□□□ -1.16
HTT-201ENST00000355072 SLX4IPQ5VYV7 408 aa7.82□□□□□ -1.16
HTT-201ENST00000355072 MED27Q6P2C8 311 aa7.82□□□□□ -1.16
HTT-201ENST00000355072 ACOT1Q86TX2 421 aa7.82□□□□□ -1.16
HTT-201ENST00000355072 SCML4Q8N228 414 aa7.82□□□□□ -1.16
HTT-201ENST00000355072 SCGB1C1Q8TD33 95 aa7.82□□□□□ -1.16
HTT-201ENST00000355072 ADAMTS15Q8TE58 950 aa7.82□□□□□ -1.16
HTT-201ENST00000355072 CTBP1Q13363 440 aa7.82□□□□□ -1.16
HTT-201ENST00000355072 SF3A2Q15428 464 aaKnown RBP7.82□□□□□ -1.16
HTT-201ENST00000355072 C19orf35Q6ZS72 473 aa7.82□□□□□ -1.16
HTT-201ENST00000355072 ZNF563Q8TA94 476 aa7.82□□□□□ -1.16
HTT-201ENST00000355072 PHYHIPQ92561 330 aa7.82□□□□□ -1.16
HTT-201ENST00000355072 TMEM121BQ9BXQ6 578 aaPredicted RBP7.82□□□□□ -1.16
HTT-201ENST00000355072 TMEM39BQ9GZU3 492 aa7.82□□□□□ -1.16
HTT-201ENST00000355072 EIF5A2Q9GZV4 153 aaKnown RBP7.82□□□□□ -1.16
HTT-201ENST00000355072 CCM2LQ9NUG4 571 aaPredicted RBP7.82□□□□□ -1.16
HTT-201ENST00000355072 INPPL1O15357 1258 aa7.82□□□□□ -1.16
HTT-201ENST00000355072 TSPAN8P19075 237 aa7.82□□□□□ -1.16
HTT-201ENST00000355072 KCNA5P22460 613 aa7.82□□□□□ -1.16
HTT-201ENST00000355072 VLDLRP98155 873 aa7.82□□□□□ -1.16
HTT-201ENST00000355072 CAP1Q01518 475 aa7.82□□□□□ -1.16
HTT-201ENST00000355072 HNRNPDQ14103 355 aaKnown RBP7.82□□□□□ -1.16
HTT-201ENST00000355072 PGM5Q15124 567 aa7.82□□□□□ -1.16
HTT-201ENST00000355072 KXD1Q9BQD3 176 aa7.82□□□□□ -1.16
HTT-201ENST00000355072 ABCG8Q9H221 673 aa7.82□□□□□ -1.16
HTT-201ENST00000355072 SNCAIPQ9Y6H5 919 aa7.82□□□□□ -1.16
HTT-201ENST00000355072 E5RJQ4 531 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 MEN1O00255 615 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 MATN4O95460 622 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 OR2AJ1Q8NGZ0 328 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 TKTL2Q9H0I9 626 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 UFSP2Q9NUQ7 469 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 ZNF490Q9ULM2 529 aaPredicted RBP7.81□□□□□ -1.16
HTT-201ENST00000355072 PRELID3BQ9Y3B1 194 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 GGT3PA6NGU5 568 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 CDC7O00311 574 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 IRAK2O43187 625 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 PI15O43692 258 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 S1PR1P21453 382 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 GGT2P36268 569 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 LASP1Q14847 261 aaKnown RBP7.81□□□□□ -1.16
HTT-201ENST00000355072 SLC14A2Q15849 920 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 CTXN3Q4LDR2 81 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 C6orf89Q6UWU4 347 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 MBOAT1Q6ZNC8 495 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 ZNF440Q8IYI8 595 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 BEST3Q8N1M1 668 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 OR10T2Q8NGX3 314 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 CD180Q99467 661 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 RAD9AQ99638 391 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 FUZQ9BT04 418 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 OR52A5Q9H2C5 316 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 ZDHHC7Q9NXF8 308 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 PAQR5Q9NXK6 330 aaPredicted RBP7.81□□□□□ -1.16
HTT-201ENST00000355072 CNOT6Q9ULM6 557 aaKnown RBP7.81□□□□□ -1.16
HTT-201ENST00000355072 SNCGO76070 127 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 C22orf31O95567 290 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 HK1P19367 917 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 MAP2K3P46734 347 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 MC2RQ01718 297 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 ACDQ96AP0 544 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 PRDM12Q9H4Q4 367 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 SGK2Q9HBY8 427 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 SLC17A6Q9P2U8 582 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 AIPO00170 330 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 GMDSO60547 372 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 ZDHHC11BP0C7U3 371 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 PPT1P50897 306 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 B3GLCTQ6Y288 498 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 PLPPR4Q7Z2D5 763 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 NUDT13Q86X67 352 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 MFSD6LQ8IWD5 586 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 ZDHHC14Q8IZN3 488 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 ZNF486Q96H40 463 aaPredicted RBP7.81□□□□□ -1.16
HTT-201ENST00000355072 CHST7Q9NS84 486 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 PLIN4Q96Q06 1357 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 B3GALNT1O75752 331 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 FAM162BQ5T6X4 162 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 KIAA1161Q6NSJ0 714 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 LCLAT1Q6UWP7 414 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 RNF44Q7L0R7 432 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 FBXO33Q7Z6M2 555 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 MIB1Q86YT6 1006 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 RAB39BQ96DA2 213 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 KIF26BQ2KJY2 2108 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 HTR3BO95264 441 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 TGFB1P01137 390 aa7.81□□□□□ -1.16
HTT-201ENST00000355072 ALPPP05187 535 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms