RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 KRR1Q13601 381 aaKnown RBP9.09□□□□□ -0.95
SMG6-202ENST00000354901 ACOX1Q15067 660 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 TRIM71Q2Q1W2 868 aaKnown RBP9.09□□□□□ -0.95
SMG6-202ENST00000354901 KLHL17Q6TDP4 642 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 ENPP6Q6UWR7 440 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 DGLUCYQ7Z3D6 616 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 GOLGA7Q7Z5G4 137 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 LACC1Q8IV20 430 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 SKA2Q8WVK7 121 aaPredicted RBP9.09□□□□□ -0.95
SMG6-202ENST00000354901 MARC2Q969Z3 335 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 AURKBQ96GD4 344 aaPredicted RBP9.09□□□□□ -0.95
SMG6-202ENST00000354901 CAPNS2Q96L46 248 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 ZNF300Q96RE9 604 aaPredicted RBP9.09□□□□□ -0.95
SMG6-202ENST00000354901 BCL7BQ9BQE9 202 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 LATS2Q9NRM7 1088 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 ACOXLQ9NUZ1 547 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 FAM8A1Q9UBU6 413 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 PKP3Q9Y446 797 aa9.09□□□□□ -0.95
SMG6-202ENST00000354901 FAM234BA2RU67 622 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 C2orf78A6NCI8 922 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 SYN3O14994 580 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 DIRAS1O95057 198 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 EOMESO95936 686 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 CHRM5P08912 532 aaPredicted RBP9.08□□□□□ -0.96
SMG6-202ENST00000354901 TNNI3P19429 210 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 ACLYP53396 1101 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 ATN1P54259 1190 aaPredicted RBP9.08□□□□□ -0.96
SMG6-202ENST00000354901 GPR17Q13304 367 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 PLD1Q13393 1074 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 GTF2H2Q13888 395 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 EFR3AQ14156 821 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 FAM174BQ3ZCQ3 159 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 FAM98BQ52LJ0 330 aaKnown RBP9.08□□□□□ -0.96
SMG6-202ENST00000354901 XKR7Q5GH72 579 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 ARMCX4Q5H9R4 360 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 GARNL3Q5VVW2 1013 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 GTF2H2CQ6P1K8 395 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 PNCKQ6P2M8 343 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 HIPK1Q86Z02 1210 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 SLC44A2Q8IWA5 706 aaPredicted RBP9.08□□□□□ -0.96
SMG6-202ENST00000354901 PHACTR4Q8IZ21 702 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 LKAAEAR1Q8TD35 194 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 IER2Q9BTL4 223 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 SORBS1Q9BX66 1292 aaKnown RBP9.08□□□□□ -0.96
SMG6-202ENST00000354901 ADGRE3Q9BY15 652 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 LRRC3Q9BY71 257 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 SCPEP1Q9HB40 452 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 ABCB9Q9NP78 766 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 SPATA6Q9NWH7 488 aaPredicted RBP9.08□□□□□ -0.96
SMG6-202ENST00000354901 VAPAQ9P0L0 249 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 MALT1Q9UDY8 824 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 SLC23A1Q9UHI7 598 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 LRFN2Q9ULH4 789 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 PCDHB7Q9Y5E2 793 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 CLCA3PQ9Y6N3 262 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 LIPAP38571 399 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 HNF4AP41235 474 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 PRIM2P49643 509 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 CDH4P55283 916 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 ARF5P84085 180 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 RING1Q06587 406 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 CDK5R2Q13319 367 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 IRF3Q14653 427 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 OTOP2Q7RTS6 562 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 ANKRD46Q86W74 232 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 KRTCAP2Q8N6L1 136 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 SLC22A8Q8TCC7 542 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 SLC7A6Q92536 515 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 FATE1Q969F0 183 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 TESCQ96BS2 214 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 EID2BQ96D98 161 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 MBOAT4Q96T53 435 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 BTBD2Q9BX70 525 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 PPIL3Q9H2H8 161 aaKnown RBP9.08□□□□□ -0.96
SMG6-202ENST00000354901 MARCH5Q9NX47 278 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 USE1Q9NZ43 259 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 PATJQ8NI35 1801 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 ANKRD36A6QL64 1941 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 FAM92AA1XBS5 289 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 METTL15A6NJ78 407 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 OR6C75A6NL08 312 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 STX16O14662 325 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 KDELR3O43731 214 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 TLL1O43897 1013 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 B3GALT4O96024 378 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 PCMT1P22061 227 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 DDOSTP39656 456 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 ABATP80404 500 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 HOXC5Q00444 222 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 MXD1Q05195 221 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 SMARCB1Q12824 385 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 MRPL28Q13084 256 aaKnown RBP9.08□□□□□ -0.96
SMG6-202ENST00000354901 NFE2L1Q14494 772 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 PLEKHG6Q3KR16 790 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 GCNT7Q6ZNI0 430 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 ZFAND4Q86XD8 727 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 VANGL1Q8TAA9 524 aaPredicted RBP9.08□□□□□ -0.96
SMG6-202ENST00000354901 ENKURQ8TC29 256 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 FAM162AQ96A26 154 aa9.08□□□□□ -0.96
SMG6-202ENST00000354901 MAGEB10Q96LZ2 347 aaPredicted RBP9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms