RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 EFL1Q7Z2Z2 1120 aaKnown RBP9.78□□□□□ -0.84
SYNE1-203ENST00000354674 TRMT11Q7Z4G4 463 aaKnown RBP9.78□□□□□ -0.84
SYNE1-203ENST00000354674 HSD11B1LQ7Z5J1 315 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 SLC41A1Q8IVJ1 513 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 HS3ST5Q8IZT8 346 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 SPARTQ8N0X7 666 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 ZNF687Q8N1G0 1237 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 RAB7BQ96AH8 199 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 RHNO1Q9BSD3 238 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 IER2Q9BTL4 223 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 C1QTNF6Q9BXI9 259 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 C1QTNF7Q9BXJ2 289 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 P2RY12Q9H244 342 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 DUSP12Q9UNI6 340 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 INVSQ9Y283 1065 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 ANKRD6Q9Y2G4 727 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 COPG1Q9Y678 874 aaKnown RBP9.78□□□□□ -0.84
SYNE1-203ENST00000354674 HNRNPCL2B2RXH8 293 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 H0YJX3 145 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 SEC14L2O76054 403 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 ADH1BP00325 375 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 IL1BP01584 269 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 ALBP02768 609 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 CSF2P04141 144 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 C2P06681 752 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 TSPAN8P19075 237 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 FDXRP22570 491 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 DRD3P35462 400 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 P2RY2P41231 377 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 PTGER3P43115 390 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 NAGLUP54802 743 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 ATP6V0D1P61421 351 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 ELP6Q0PNE2 266 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 BTN1A1Q13410 526 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 ARHGEF7Q14155 803 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 USP10Q14694 798 aaKnown RBP9.78□□□□□ -0.84
SYNE1-203ENST00000354674 CHRNA6Q15825 494 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 FBXO43Q4G163 708 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 AASDHQ4L235 1098 aaPredicted RBP9.78□□□□□ -0.84
SYNE1-203ENST00000354674 CYBRD1Q53TN4 286 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 PIP5KL1Q5T9C9 394 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 HECTD2Q5U5R9 776 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 FAM45BPQ6NSW5 357 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 FAM122CQ6P4D5 195 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 PAMR1Q6UXH9 720 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 FAM151BQ6UXP7 276 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 NRSN1Q8IZ57 195 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 CLEC4FQ8N1N0 589 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 GALNT11Q8NCW6 608 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 FAM45AQ8TCE6 357 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 ASB12Q8WXK4 309 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 SH3KBP1Q96B97 665 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 COQ10AQ96MF6 247 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 COPS4Q9BT78 406 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 AARSD1Q9BTE6 412 aaKnown RBP9.78□□□□□ -0.84
SYNE1-203ENST00000354674 SORBS1Q9BX66 1292 aaKnown RBP9.78□□□□□ -0.84
SYNE1-203ENST00000354674 ROGDIQ9GZN7 287 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 POPDC3Q9HBV1 291 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 MRPL40Q9NQ50 206 aaKnown RBP9.78□□□□□ -0.84
SYNE1-203ENST00000354674 ATP6V1HQ9UI12 483 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 MED16Q9Y2X0 877 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 VWA7Q9Y334 891 aa9.78□□□□□ -0.84
SYNE1-203ENST00000354674 A0A096LPK6 155 aa9.77□□□□□ -0.84
SYNE1-203ENST00000354674 SLC22A1O15245 554 aa9.77□□□□□ -0.84
SYNE1-203ENST00000354674 GLRA3O75311 464 aa9.77□□□□□ -0.84
SYNE1-203ENST00000354674 RPS3P23396 243 aaKnown RBP eCLIP9.77□□□□□ -0.84
SYNE1-203ENST00000354674 ACRV1P26436 265 aa9.77□□□□□ -0.84
SYNE1-203ENST00000354674 RPL35P42766 123 aaKnown RBP9.77□□□□□ -0.84
SYNE1-203ENST00000354674 TAS2R39P59534 338 aa9.77□□□□□ -0.84
SYNE1-203ENST00000354674 TAGLNQ01995 201 aaKnown RBP9.77□□□□□ -0.84
SYNE1-203ENST00000354674 SYT16Q17RD7 645 aa9.77□□□□□ -0.84
SYNE1-203ENST00000354674 POM121L1PQ3SYA9 428 aa9.77□□□□□ -0.84
SYNE1-203ENST00000354674 BCL7AQ4VC05 210 aa9.77□□□□□ -0.84
SYNE1-203ENST00000354674 ZRANB3Q5FWF4 1079 aa9.77□□□□□ -0.84
SYNE1-203ENST00000354674 KIAA1211LQ6NV74 962 aa9.77□□□□□ -0.84
SYNE1-203ENST00000354674 RFLNAQ6ZTI6 216 aa9.77□□□□□ -0.84
SYNE1-203ENST00000354674 TRIM63Q969Q1 353 aa9.77□□□□□ -0.84
SYNE1-203ENST00000354674 FBXW5Q969U6 566 aa9.77□□□□□ -0.84
SYNE1-203ENST00000354674 ASB9Q96DX5 294 aa9.77□□□□□ -0.84
SYNE1-203ENST00000354674 ELMO2Q96JJ3 720 aa9.77□□□□□ -0.84
SYNE1-203ENST00000354674 DSN1Q9H410 356 aa9.77□□□□□ -0.84
SYNE1-203ENST00000354674 FAM96AQ9H5X1 160 aa9.77□□□□□ -0.84
SYNE1-203ENST00000354674 RNF167Q9H6Y7 350 aa9.77□□□□□ -0.84
SYNE1-203ENST00000354674 SYTL2Q9HCH5 934 aa9.77□□□□□ -0.84
SYNE1-203ENST00000354674 ZDHHC2Q9UIJ5 367 aa9.77□□□□□ -0.84
SYNE1-203ENST00000354674 SNX7Q9UNH6 387 aa9.77□□□□□ -0.84
SYNE1-203ENST00000354674 EIF3LQ9Y262 564 aaKnown RBP9.77□□□□□ -0.84
SYNE1-203ENST00000354674 COMMD10Q9Y6G5 202 aa9.77□□□□□ -0.84
SYNE1-203ENST00000354674 TP53BP1Q12888 1972 aaPredicted RBP9.77□□□□□ -0.84
SYNE1-203ENST00000354674 IGLV3-16A0A075B6K0 115 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 STMN1P16949 149 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 C5AR1P21730 350 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 XPAP23025 273 aaPredicted RBP9.77□□□□□ -0.85
SYNE1-203ENST00000354674 SLC7A1P30825 629 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 PSMD8P48556 350 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 MASP1P48740 699 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 CDKN2DP55273 166 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 RPS14P62263 151 aaKnown RBP9.77□□□□□ -0.85
SYNE1-203ENST00000354674 CST6Q15828 149 aa9.77□□□□□ -0.85
SYNE1-203ENST00000354674 CTF1Q16619 201 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms