RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 TMEM121BQ9BXQ6 578 aaPredicted RBP18.88■□□□□ 0.61
COL13A1-201ENST00000354547 STOX2Q9P2F5 926 aaPredicted RBP18.88■□□□□ 0.61
COL13A1-201ENST00000354547 RUVBL1Q9Y265 456 aaKnown RBP18.88■□□□□ 0.61
COL13A1-201ENST00000354547 ITM2BQ9Y287 266 aa18.88■□□□□ 0.61
COL13A1-201ENST00000354547 RGS10O43665 173 aa18.87■□□□□ 0.61
COL13A1-201ENST00000354547 PCDH7O60245 1069 aa18.87■□□□□ 0.61
COL13A1-201ENST00000354547 PABPC1P11940 636 aaKnown RBP18.87■□□□□ 0.61
COL13A1-201ENST00000354547 RPS13P62277 151 aaKnown RBP18.87■□□□□ 0.61
COL13A1-201ENST00000354547 MEF2AQ02078 507 aaPredicted RBP18.87■□□□□ 0.61
COL13A1-201ENST00000354547 TRIM60Q495X7 471 aa18.87■□□□□ 0.61
COL13A1-201ENST00000354547 ZNF852Q6ZMS4 543 aa18.87■□□□□ 0.61
COL13A1-201ENST00000354547 CBLL1Q75N03 491 aa18.87■□□□□ 0.61
COL13A1-201ENST00000354547 TMC8Q8IU68 726 aa18.87■□□□□ 0.61
COL13A1-201ENST00000354547 HUS1BQ8NHY5 278 aa18.87■□□□□ 0.61
COL13A1-201ENST00000354547 WDR20Q8TBZ3 569 aa18.87■□□□□ 0.61
COL13A1-201ENST00000354547 HERC2P3Q9BVR0 1158 aa18.87■□□□□ 0.61
COL13A1-201ENST00000354547 EMILIN2Q9BXX0 1053 aa18.87■□□□□ 0.61
COL13A1-201ENST00000354547 ZNF510Q9Y2H8 683 aa18.87■□□□□ 0.61
COL13A1-201ENST00000354547 PCDHB11Q9Y5F2 797 aa18.87■□□□□ 0.61
COL13A1-201ENST00000354547 MICAL3Q7RTP6 2002 aa18.87■□□□□ 0.61
COL13A1-201ENST00000354547 PCDHGA12O60330 932 aa18.87■□□□□ 0.61
COL13A1-201ENST00000354547 IL1RNP18510 177 aa18.87■□□□□ 0.61
COL13A1-201ENST00000354547 PRPH2P23942 346 aa18.87■□□□□ 0.61
COL13A1-201ENST00000354547 POLR2LP62875 67 aaKnown RBP18.87■□□□□ 0.61
COL13A1-201ENST00000354547 NPRL3Q12980 569 aa18.87■□□□□ 0.61
COL13A1-201ENST00000354547 MAD2L1BPQ15013 274 aaPredicted RBP18.87■□□□□ 0.61
COL13A1-201ENST00000354547 CAPN13Q6MZZ7 669 aaPredicted RBP18.87■□□□□ 0.61
COL13A1-201ENST00000354547 OTOP2Q7RTS6 562 aa18.87■□□□□ 0.61
COL13A1-201ENST00000354547 OR4A15Q8NGL6 344 aa18.87■□□□□ 0.61
COL13A1-201ENST00000354547 TMEM184CQ9NVA4 438 aa18.87■□□□□ 0.61
COL13A1-201ENST00000354547 ACSL6Q9UKU0 697 aa18.87■□□□□ 0.61
COL13A1-201ENST00000354547 SUV39H1O43463 412 aa18.87■□□□□ 0.61
COL13A1-201ENST00000354547 MC1RQ01726 317 aa18.87■□□□□ 0.61
COL13A1-201ENST00000354547 MAPK11Q15759 364 aa18.87■□□□□ 0.61
COL13A1-201ENST00000354547 KIAA1614Q5VZ46 1190 aa18.87■□□□□ 0.61
COL13A1-201ENST00000354547 LIPJQ5W064 366 aa18.87■□□□□ 0.61
COL13A1-201ENST00000354547 C2orf73Q8N5S3 287 aaPredicted RBP18.87■□□□□ 0.61
COL13A1-201ENST00000354547 SLAIN1Q8ND83 568 aa18.87■□□□□ 0.61
COL13A1-201ENST00000354547 ZNF347Q96SE7 839 aa18.87■□□□□ 0.61
COL13A1-201ENST00000354547 WRAP53Q9BUR4 548 aaKnown RBP18.87■□□□□ 0.61
COL13A1-201ENST00000354547 DUSP21Q9H596 190 aa18.87■□□□□ 0.61
COL13A1-201ENST00000354547 KLHL42Q9P2K6 505 aa18.87■□□□□ 0.61
COL13A1-201ENST00000354547 NAALAD2Q9Y3Q0 740 aa18.87■□□□□ 0.61
COL13A1-201ENST00000354547 SCAMP2O15127 329 aaKnown RBP18.86■□□□□ 0.61
COL13A1-201ENST00000354547 SULT1C4O75897 302 aa18.86■□□□□ 0.61
COL13A1-201ENST00000354547 ST13P50502 369 aaKnown RBP18.86■□□□□ 0.61
COL13A1-201ENST00000354547 NUDT6P53370 316 aa18.86■□□□□ 0.61
COL13A1-201ENST00000354547 CRYBA2P53672 197 aa18.86■□□□□ 0.61
COL13A1-201ENST00000354547 RAE1P78406 368 aaKnown RBP18.86■□□□□ 0.61
COL13A1-201ENST00000354547 CAMK2GQ13555 558 aaPredicted RBP18.86■□□□□ 0.61
COL13A1-201ENST00000354547 COX20Q5RI15 118 aa18.86■□□□□ 0.61
COL13A1-201ENST00000354547 SYTL1Q8IYJ3 562 aa18.86■□□□□ 0.61
COL13A1-201ENST00000354547 RASGEF1AQ8N9B8 481 aa18.86■□□□□ 0.61
COL13A1-201ENST00000354547 OR7G3Q8NG95 312 aa18.86■□□□□ 0.61
COL13A1-201ENST00000354547 OR5AK3PQ8NH89 298 aa18.86■□□□□ 0.61
COL13A1-201ENST00000354547 CPEB1Q9BZB8 566 aaKnown RBP18.86■□□□□ 0.61
COL13A1-201ENST00000354547 FAM120CQ9NX05 1096 aaKnown RBP18.86■□□□□ 0.61
COL13A1-201ENST00000354547 PPIL1Q9Y3C6 166 aa18.86■□□□□ 0.61
COL13A1-201ENST00000354547 M0R129 80 aa18.86■□□□□ 0.61
COL13A1-201ENST00000354547 ETFAP13804 333 aa18.86■□□□□ 0.61
COL13A1-201ENST00000354547 TYRP14679 529 aa18.86■□□□□ 0.61
COL13A1-201ENST00000354547 POU2F1P14859 743 aa18.86■□□□□ 0.61
COL13A1-201ENST00000354547 BCAP31P51572 246 aa18.86■□□□□ 0.61
COL13A1-201ENST00000354547 DGKEP52429 567 aa18.86■□□□□ 0.61
COL13A1-201ENST00000354547 CD300CQ08708 224 aa18.86■□□□□ 0.61
COL13A1-201ENST00000354547 SP140Q13342 867 aa18.86■□□□□ 0.61
COL13A1-201ENST00000354547 STARD3Q14849 445 aa18.86■□□□□ 0.61
COL13A1-201ENST00000354547 CATSPEREQ5SY80 951 aa18.86■□□□□ 0.61
COL13A1-201ENST00000354547 TMEM215Q68D42 235 aa18.86■□□□□ 0.61
COL13A1-201ENST00000354547 DDX53Q86TM3 631 aaKnown RBP18.86■□□□□ 0.61
COL13A1-201ENST00000354547 ELMOD1Q8N336 334 aa18.86■□□□□ 0.61
COL13A1-201ENST00000354547 OR8J2Q8NGG1 315 aa18.86■□□□□ 0.61
COL13A1-201ENST00000354547 CHPT1Q8WUD6 406 aa18.86■□□□□ 0.61
COL13A1-201ENST00000354547 NEIL2Q969S2 332 aa18.86■□□□□ 0.61
COL13A1-201ENST00000354547 LMLNQ96KR4 655 aa18.86■□□□□ 0.61
COL13A1-201ENST00000354547 PKP4Q99569 1192 aa18.86■□□□□ 0.61
COL13A1-201ENST00000354547 SH3GLB1Q9Y371 365 aa18.86■□□□□ 0.61
COL13A1-201ENST00000354547 C21orf33P30042 268 aaPredicted RBP18.85■□□□□ 0.61
COL13A1-201ENST00000354547 IDH2P48735 452 aaKnown RBP18.85■□□□□ 0.61
COL13A1-201ENST00000354547 ACOX1Q15067 660 aa18.85■□□□□ 0.61
COL13A1-201ENST00000354547 PROX1Q92786 737 aa18.85■□□□□ 0.61
COL13A1-201ENST00000354547 HHIPQ96QV1 700 aa18.85■□□□□ 0.61
COL13A1-201ENST00000354547 HMG20AQ9NP66 347 aa18.85■□□□□ 0.61
COL13A1-201ENST00000354547 NDRG4Q9ULP0 352 aaKnown RBP18.85■□□□□ 0.61
COL13A1-201ENST00000354547 ATP11BQ9Y2G3 1177 aa18.85■□□□□ 0.61
COL13A1-201ENST00000354547 EIF3FO00303 357 aaPredicted RBP18.85■□□□□ 0.61
COL13A1-201ENST00000354547 JRKO75564 520 aa18.85■□□□□ 0.61
COL13A1-201ENST00000354547 TGFB1P01137 390 aa18.85■□□□□ 0.61
COL13A1-201ENST00000354547 GSTM4Q03013 218 aa18.85■□□□□ 0.61
COL13A1-201ENST00000354547 RELAQ04206 551 aa18.85■□□□□ 0.61
COL13A1-201ENST00000354547 CSTF3Q12996 717 aaKnown RBP18.85■□□□□ 0.61
COL13A1-201ENST00000354547 DNASE1L3Q13609 305 aa18.85■□□□□ 0.61
COL13A1-201ENST00000354547 KEAP1Q14145 624 aa18.85■□□□□ 0.61
COL13A1-201ENST00000354547 ZNF846Q147U1 533 aa18.85■□□□□ 0.61
COL13A1-201ENST00000354547 RGNQ15493 299 aa18.85■□□□□ 0.61
COL13A1-201ENST00000354547 LY6G5CQ5SRR4 150 aa18.85■□□□□ 0.61
COL13A1-201ENST00000354547 ERICH5Q6P6B1 374 aa18.85■□□□□ 0.61
COL13A1-201ENST00000354547 TTC23LQ6PF05 361 aa18.85■□□□□ 0.61
COL13A1-201ENST00000354547 TMEM220Q6QAJ8 160 aa18.85■□□□□ 0.61
COL13A1-201ENST00000354547 P3H2Q8IVL5 708 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms