RNA–Protein interactions for RNA: ENST00000353047.10

CTSB-202, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 3,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-202ENST00000353047 ARHGEF9O43307 516 aa17.46■□□□□ 0.39
CTSB-202ENST00000353047 CPNE6O95741 557 aa17.46■□□□□ 0.39
CTSB-202ENST00000353047 TSPAN12O95859 305 aa17.46■□□□□ 0.39
CTSB-202ENST00000353047 C6orf47O95873 294 aa17.46■□□□□ 0.39
CTSB-202ENST00000353047 CCND3P30281 292 aaPredicted RBP17.46■□□□□ 0.39
CTSB-202ENST00000353047 SLC11A1P49279 550 aa17.46■□□□□ 0.39
CTSB-202ENST00000353047 COQ5Q5HYK3 327 aa17.46■□□□□ 0.39
CTSB-202ENST00000353047 CLEC12AQ5QGZ9 265 aa17.46■□□□□ 0.39
CTSB-202ENST00000353047 LIPKQ5VXJ0 399 aa17.46■□□□□ 0.39
CTSB-202ENST00000353047 THOC7Q6I9Y2 204 aaKnown RBP17.46■□□□□ 0.39
CTSB-202ENST00000353047 SNX20Q7Z614 316 aa17.46■□□□□ 0.39
CTSB-202ENST00000353047 TMEM169Q96HH4 297 aa17.46■□□□□ 0.39
CTSB-202ENST00000353047 CCM2Q9BSQ5 444 aa17.46■□□□□ 0.39
CTSB-202ENST00000353047 HDHD2Q9H0R4 259 aa17.46■□□□□ 0.39
CTSB-202ENST00000353047 ZDHHC4Q9NPG8 344 aa17.46■□□□□ 0.39
CTSB-202ENST00000353047 KCTD5Q9NXV2 234 aa17.46■□□□□ 0.39
CTSB-202ENST00000353047 CLCA3PQ9Y6N3 262 aa17.46■□□□□ 0.39
CTSB-202ENST00000353047 ARID2Q68CP9 1835 aa17.46■□□□□ 0.39
CTSB-202ENST00000353047 ALPK2Q86TB3 2170 aa17.46■□□□□ 0.39
CTSB-202ENST00000353047 KDELR3O43731 214 aa17.46■□□□□ 0.39
CTSB-202ENST00000353047 ITIH1P19827 911 aa17.46■□□□□ 0.39
CTSB-202ENST00000353047 CA5AP35218 305 aa17.46■□□□□ 0.39
CTSB-202ENST00000353047 ACOX1Q15067 660 aa17.46■□□□□ 0.39
CTSB-202ENST00000353047 CERS6Q6ZMG9 384 aa17.46■□□□□ 0.39
CTSB-202ENST00000353047 MROQ9BYG7 248 aa17.46■□□□□ 0.39
CTSB-202ENST00000353047 GPBP1L1Q9HC44 474 aaPredicted RBP17.46■□□□□ 0.39
CTSB-202ENST00000353047 CLN6Q9NWW5 311 aa17.46■□□□□ 0.39
CTSB-202ENST00000353047 SPATA7Q9P0W8 599 aa17.46■□□□□ 0.39
CTSB-202ENST00000353047 CFAP97Q9P2B7 532 aa17.46■□□□□ 0.39
CTSB-202ENST00000353047 VPS29Q9UBQ0 182 aa17.46■□□□□ 0.39
CTSB-202ENST00000353047 FBXO10Q9UK96 956 aa17.46■□□□□ 0.39
CTSB-202ENST00000353047 PCDH7O60245 1069 aa17.46■□□□□ 0.38
CTSB-202ENST00000353047 TYSND1Q2T9J0 566 aa17.46■□□□□ 0.38
CTSB-202ENST00000353047 OLIG3Q7RTU3 272 aa17.46■□□□□ 0.38
CTSB-202ENST00000353047 C19orf18Q8NEA5 215 aa17.46■□□□□ 0.38
CTSB-202ENST00000353047 MGME1Q9BQP7 344 aa17.46■□□□□ 0.38
CTSB-202ENST00000353047 DYRK4Q9NR20 520 aa17.46■□□□□ 0.38
CTSB-202ENST00000353047 ABCB8Q9NUT2 735 aa17.46■□□□□ 0.38
CTSB-202ENST00000353047 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.45■□□□□ 0.38
CTSB-202ENST00000353047 TMEM221A6NGB7 291 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 GADD45GO95257 159 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 PTHP01270 115 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 IGLV3-25P01717 112 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 Q6ZVL8 140 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 Q6ZVU0 165 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 SLC22A12Q96S37 553 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 YME1L1Q96TA2 773 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 TMEM246Q9BRR3 403 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 MAF1Q9H063 256 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 TM9SF3Q9HD45 589 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 HEBP1Q9NRV9 189 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 C9P02748 559 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 GABRR2P28476 465 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 CLCN7P51798 805 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 LILRA3Q8N6C8 439 aaPredicted RBP17.45■□□□□ 0.38
CTSB-202ENST00000353047 IQCF1Q8N6M8 205 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 SORCS1Q8WY21 1168 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 DUS3LQ96G46 650 aaKnown RBP17.45■□□□□ 0.38
CTSB-202ENST00000353047 OR5M11Q96RB7 305 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 RTCAO00442 366 aaKnown RBP17.45■□□□□ 0.38
CTSB-202ENST00000353047 AP3D1O14617 1153 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 ERAL1O75616 437 aaKnown RBP17.45■□□□□ 0.38
CTSB-202ENST00000353047 STC2O76061 302 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 CAV3P56539 151 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 ARF5P84085 180 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 GRSF1Q12849 480 aaKnown RBP eCLIP17.45■□□□□ 0.38
CTSB-202ENST00000353047 DUOXA1Q1HG43 343 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 TBRG1Q3YBR2 411 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 BCL7AQ4VC05 210 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 DHRS4L2Q6PKH6 230 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 USP51Q70EK9 711 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 ZNF467Q7Z7K2 595 aaPredicted RBP17.45■□□□□ 0.38
CTSB-202ENST00000353047 RNF130Q86XS8 419 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 MSRB3Q8IXL7 192 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 KCNH6Q9H252 994 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 TRIT1Q9H3H1 467 aaKnown RBP17.45■□□□□ 0.38
CTSB-202ENST00000353047 TBC1D17Q9HA65 648 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 POPDC3Q9HBV1 291 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 EQTNQ9NQ60 294 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 UCKL1Q9NWZ5 548 aa17.45■□□□□ 0.38
CTSB-202ENST00000353047 A0A1B0GVC2 190 aa17.44■□□□□ 0.38
CTSB-202ENST00000353047 CCDC182A6NF36 153 aa17.44■□□□□ 0.38
CTSB-202ENST00000353047 A6NIN4 97 aa17.44■□□□□ 0.38
CTSB-202ENST00000353047 TRIQKQ629K1 86 aa17.44■□□□□ 0.38
CTSB-202ENST00000353047 GTF2IRD2BQ6EKJ0 949 aa17.44■□□□□ 0.38
CTSB-202ENST00000353047 GTF2IRD2Q86UP8 949 aa17.44■□□□□ 0.38
CTSB-202ENST00000353047 VRK3Q8IV63 474 aa17.44■□□□□ 0.38
CTSB-202ENST00000353047 PARP16Q8N5Y8 322 aa17.44■□□□□ 0.38
CTSB-202ENST00000353047 WFDC5Q8TCV5 224 aa17.44■□□□□ 0.38
CTSB-202ENST00000353047 EXOSC8Q96B26 276 aaKnown RBP17.44■□□□□ 0.38
CTSB-202ENST00000353047 MGLLQ99685 303 aa17.44■□□□□ 0.38
CTSB-202ENST00000353047 SLC35A5Q9BS91 424 aa17.44■□□□□ 0.38
CTSB-202ENST00000353047 OSGEPL1Q9H4B0 414 aa17.44■□□□□ 0.38
CTSB-202ENST00000353047 PLAGL1Q9UM63 463 aa17.44■□□□□ 0.38
CTSB-202ENST00000353047 PCDHGB3Q9Y5G1 929 aa17.44■□□□□ 0.38
CTSB-202ENST00000353047 MGAMO43451 1857 aa17.44■□□□□ 0.38
CTSB-202ENST00000353047 GFRA2O00451 464 aa17.44■□□□□ 0.38
CTSB-202ENST00000353047 EBLN1P0CF75 366 aa17.44■□□□□ 0.38
CTSB-202ENST00000353047 S100A1P23297 94 aa17.44■□□□□ 0.38
CTSB-202ENST00000353047 RPS13P62277 151 aaKnown RBP17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms