RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 ATP6V1C2Q8NEY4 427 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 OR4M1Q8NGD0 313 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 OR6C4Q8NGE1 309 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 ZNF431Q8TF32 576 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-201ENST00000352993 PEX13Q92968 403 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 EXOC2Q96KP1 924 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 B3GALT6Q96L58 329 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 TEPSINQ96N21 525 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 CPPED1Q9BRF8 314 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-201ENST00000352993 POLR2J2Q9GZM3 115 aaKnown RBP7.39□□□□□ -1.23
BRCA1-201ENST00000352993 ARNT2Q9HBZ2 717 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 GALNT9Q9HCQ5 603 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 CLN6Q9NWW5 311 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 STOML2Q9UJZ1 356 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 TRAPPC4Q9Y296 219 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 GJA3Q9Y6H8 435 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 V9GYH0 126 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 A0A075B6Q4 140 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 SLC28A1O00337 649 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 MYL12BO14950 172 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 GLUD1P00367 558 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 C1QBP02746 253 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 C1QCP02747 245 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 BCKDHAP12694 445 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 MYL12AP19105 171 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 OR1E2P47887 323 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 CDC42P60953 191 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 IL18Q14116 193 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 DSC3Q14574 896 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 ZBTB6Q15916 424 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 GRIK4Q16099 956 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 SNAPC1Q16533 368 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 SPDYE7PQ495Y7 208 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 SLC35F1Q5T1Q4 408 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 SAXO2Q658L1 398 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 ANKRD54Q6NXT1 300 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 MSANTD2Q6P1R3 559 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 COMMD7Q86VX2 200 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 TMC8Q8IU68 726 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 DPF3Q92784 378 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 SIPA1Q96FS4 1042 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 ZFP42Q96MM3 310 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 SMIM14Q96QK8 99 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 HDHD2Q9H0R4 259 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 R3HDMLQ9H3Y0 253 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 POPDC3Q9HBV1 291 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 ASAH2Q9NR71 780 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 B3GNT2Q9NY97 397 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 ING4Q9UNL4 249 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 PCDHGB3Q9Y5G1 929 aa7.39□□□□□ -1.23
BRCA1-201ENST00000352993 TNPO3Q9Y5L0 923 aaKnown RBP7.39□□□□□ -1.23
BRCA1-201ENST00000352993 COL11A1P12107 1806 aaPredicted RBP7.39□□□□□ -1.23
BRCA1-201ENST00000352993 A0A0B4J293 547 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 LOC102723532A0A0G2JNH3 316 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 FPGTO14772 594 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 WNT9AO14904 365 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 NUPL2O15504 423 aaKnown RBP7.38□□□□□ -1.23
BRCA1-201ENST00000352993 SH3BGRLO75368 114 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 TP53P04637 393 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-201ENST00000352993 CLEC2LP0C7M8 214 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 NAT2P11245 290 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 CTRB1P17538 263 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 OGNP20774 298 aaKnown RBP7.38□□□□□ -1.23
BRCA1-201ENST00000352993 ETV6P41212 452 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 PSPHP78330 225 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 CXCL9Q07325 125 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 SLC14A1Q13336 389 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 FGFBP1Q14512 234 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 ZMYND11Q15326 602 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 VMACQ2NL98 169 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 TRIM71Q2Q1W2 868 aaKnown RBP7.38□□□□□ -1.23
BRCA1-201ENST00000352993 KLHL12Q53G59 568 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 DDI2Q5TDH0 399 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 LIPKQ5VXJ0 399 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 CTRB2Q6GPI1 263 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 KCTD20Q7Z5Y7 419 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 CIR1Q86X95 450 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-201ENST00000352993 SCN4BQ8IWT1 228 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 TAGAPQ8N103 731 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 LGI4Q8N135 537 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 SKA2Q8WVK7 121 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-201ENST00000352993 RNF31Q96EP0 1072 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 SMARCD1Q96GM5 515 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 SPON2Q9BUD6 331 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 DPCDQ9BVM2 203 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-201ENST00000352993 C1QTNF7Q9BXJ2 289 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 BARHL1Q9BZE3 327 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 SPATC1LQ9H0A9 340 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 GABARAPL1Q9H0R8 117 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 KCNH6Q9H252 994 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 CLEC4MQ9H2X3 399 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-201ENST00000352993 LATS2Q9NRM7 1088 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 NEUROG3Q9Y4Z2 214 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 OR7A17O14581 309 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 ORC5O43913 435 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 WARSP23381 471 aaKnown RBP7.38□□□□□ -1.23
BRCA1-201ENST00000352993 APEX1P27695 318 aaKnown RBP7.38□□□□□ -1.23
BRCA1-201ENST00000352993 HOXA11P31270 313 aaPredicted RBP7.38□□□□□ -1.23
BRCA1-201ENST00000352993 EVI2BP34910 448 aa7.38□□□□□ -1.23
BRCA1-201ENST00000352993 RPA4Q13156 261 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms