RNA–Protein interactions for RNA: ENST00000350435.11

UBE2D3-205, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2 BASIC

Gene UBE2D3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-205ENST00000350435 SLC26A11Q86WA9 606 aa8.29□□□□□ -1.08
UBE2D3-205ENST00000350435 ATPAF2Q8N5M1 289 aa8.29□□□□□ -1.08
UBE2D3-205ENST00000350435 TMEM156Q8N614 296 aa8.29□□□□□ -1.08
UBE2D3-205ENST00000350435 TMEM251Q8N6I4 163 aa8.29□□□□□ -1.08
UBE2D3-205ENST00000350435 AMER3Q8N944 861 aa8.29□□□□□ -1.08
UBE2D3-205ENST00000350435 BANPQ8N9N5 519 aa8.29□□□□□ -1.08
UBE2D3-205ENST00000350435 LINC00301Q8NCQ3 95 aa8.29□□□□□ -1.08
UBE2D3-205ENST00000350435 DDHD1Q8NEL9 900 aa8.29□□□□□ -1.08
UBE2D3-205ENST00000350435 HM13Q8TCT9 377 aa8.29□□□□□ -1.08
UBE2D3-205ENST00000350435 SPATA13Q96N96 652 aa8.29□□□□□ -1.08
UBE2D3-205ENST00000350435 WDR83Q9BRX9 315 aaKnown RBP8.29□□□□□ -1.08
UBE2D3-205ENST00000350435 DEPPQ9NTK1 212 aa8.29□□□□□ -1.08
UBE2D3-205ENST00000350435 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.29□□□□□ -1.085e-8■■■□□ 16.6
UBE2D3-205ENST00000350435 SPRR3Q9UBC9 169 aa8.29□□□□□ -1.08
UBE2D3-205ENST00000350435 SOWAHDA6NJG2 315 aa8.28□□□□□ -1.08
UBE2D3-205ENST00000350435 HS3ST1O14792 307 aa8.28□□□□□ -1.08
UBE2D3-205ENST00000350435 MATN3O15232 486 aa8.28□□□□□ -1.08
UBE2D3-205ENST00000350435 SSX4O60224 188 aa8.28□□□□□ -1.08
UBE2D3-205ENST00000350435 OR10H2O60403 315 aa8.28□□□□□ -1.08
UBE2D3-205ENST00000350435 PIRTP0C851 137 aa8.28□□□□□ -1.08
UBE2D3-205ENST00000350435 PEBP1P30086 187 aaKnown RBP8.28□□□□□ -1.08
UBE2D3-205ENST00000350435 SLC26A5P58743 744 aa8.28□□□□□ -1.08
UBE2D3-205ENST00000350435 UBE2HP62256 183 aa8.28□□□□□ -1.08
UBE2D3-205ENST00000350435 PKP1Q13835 747 aa8.28□□□□□ -1.08
UBE2D3-205ENST00000350435 SF3B4Q15427 424 aaKnown RBP eCLIP8.28□□□□□ -1.087e-7■■■■■ 28.1
UBE2D3-205ENST00000350435 SYT16Q17RD7 645 aa8.28□□□□□ -1.08
UBE2D3-205ENST00000350435 VAX1Q5SQQ9 334 aa8.28□□□□□ -1.08
UBE2D3-205ENST00000350435 ZNF449Q6P9G9 518 aa8.28□□□□□ -1.08
UBE2D3-205ENST00000350435 GJB7Q6PEY0 223 aa8.28□□□□□ -1.08
UBE2D3-205ENST00000350435 LYPD8Q6UX82 237 aa8.28□□□□□ -1.08
UBE2D3-205ENST00000350435 GK5Q6ZS86 529 aa8.28□□□□□ -1.08
UBE2D3-205ENST00000350435 RNF214Q8ND24 703 aa8.28□□□□□ -1.08
UBE2D3-205ENST00000350435 PSD4Q8NDX1 1056 aa8.28□□□□□ -1.08
UBE2D3-205ENST00000350435 ELP5Q8TE02 316 aa8.28□□□□□ -1.08
UBE2D3-205ENST00000350435 TFGQ92734 400 aaPredicted RBP8.28□□□□□ -1.08
UBE2D3-205ENST00000350435 MRPL24Q96A35 216 aaKnown RBP8.28□□□□□ -1.08
UBE2D3-205ENST00000350435 C10orf90Q96M02 699 aa8.28□□□□□ -1.08
UBE2D3-205ENST00000350435 DHX35Q9H5Z1 703 aaKnown RBP8.28□□□□□ -1.08
UBE2D3-205ENST00000350435 BPIFA1Q9NP55 256 aa8.28□□□□□ -1.08
UBE2D3-205ENST00000350435 HAUS2Q9NVX0 235 aa8.28□□□□□ -1.08
UBE2D3-205ENST00000350435 MED29Q9NX70 200 aa8.28□□□□□ -1.08
UBE2D3-205ENST00000350435 AP4E1Q9UPM8 1137 aa8.28□□□□□ -1.08
UBE2D3-205ENST00000350435 ZNF711Q9Y462 761 aa8.28□□□□□ -1.08
UBE2D3-205ENST00000350435 ATP6V1DQ9Y5K8 247 aa8.28□□□□□ -1.08
UBE2D3-205ENST00000350435 PCLOQ9Y6V0 5065 aa8.28□□□□□ -1.08
UBE2D3-205ENST00000350435 ARHGEF33A8MVX0 844 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 TRIM77I1YAP6 450 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 PIN1P1O15428 100 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 CCP110O43303 1012 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 ATP8B1O43520 1251 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 DLX3O60479 287 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 UGT1A9O60656 530 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 GLSO94925 669 aaPredicted RBP8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 CELA3AP09093 270 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 SLC25A16P16260 332 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 UGT1A6P19224 532 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 ENDOUP21128 410 aaKnown RBP8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 LOXP28300 417 aaPredicted RBP8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 CDC25BP30305 580 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 CPOXP36551 454 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 USP10Q14694 798 aaKnown RBP8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 CR1LQ2VPA4 569 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 SFT2D3Q587I9 215 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 FRMPD2BQ6IN97 320 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 CLEC2AQ6UVW9 174 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 KIF2BQ8N4N8 673 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 TEX26Q8N6G2 289 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 CPA5Q8WXQ8 436 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 REPS1Q96D71 796 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 LINC00615Q96LM1 132 aaPredicted RBP8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 RBM4Q9BWF3 364 aaKnown RBP8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 OR52A5Q9H2C5 316 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 KCNF1Q9H3M0 494 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 UGT1A7Q9HAW7 530 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 UGT1A10Q9HAW8 530 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 UGT1A8Q9HAW9 530 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 IL1RL2Q9HB29 575 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 MAGEE1Q9HCI5 957 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 LUC7LQ9NQ29 371 aaKnown RBP8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 KCMF1Q9P0J7 381 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 POLG2Q9UHN1 485 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 ING1Q9UK53 422 aaPredicted RBP8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 DNAJC12Q9UKB3 198 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 PCDHA7Q9UN72 937 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 ERVK-11Q9UQG0 969 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 LIPT1Q9Y234 373 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 TDRKHQ9Y2W6 561 aaKnown RBP8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 PCDHA13Q9Y5I0 950 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 NCKAP5O14513 1909 aa8.27□□□□□ -1.09
UBE2D3-205ENST00000350435 FREM3P0C091 2139 aa8.26□□□□□ -1.09
UBE2D3-205ENST00000350435 KDM1AO60341 852 aa8.26□□□□□ -1.09
UBE2D3-205ENST00000350435 LSM8O95777 96 aaKnown RBP8.26□□□□□ -1.09
UBE2D3-205ENST00000350435 KRT3P12035 628 aa8.26□□□□□ -1.09
UBE2D3-205ENST00000350435 DPP4P27487 766 aa8.26□□□□□ -1.09
UBE2D3-205ENST00000350435 DIO3P55073 304 aa8.26□□□□□ -1.09
UBE2D3-205ENST00000350435 DSCR9P59020 149 aa8.26□□□□□ -1.09
UBE2D3-205ENST00000350435 ITGA9Q13797 1035 aa8.26□□□□□ -1.09
UBE2D3-205ENST00000350435 BCL7AQ4VC05 210 aa8.26□□□□□ -1.09
UBE2D3-205ENST00000350435 NSUN5P2Q63ZY6 315 aa8.26□□□□□ -1.09
UBE2D3-205ENST00000350435 ALG1LQ6GMV1 187 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms