RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 KIAA1614Q5VZ46 1190 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 FAHD1Q6P587 224 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 GALNT18Q6P9A2 607 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 CEP68Q76N32 757 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 ZNF554Q86TJ5 538 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 IQCF2Q8IXL9 164 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 SLC22A15Q8IZD6 547 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 FAR1Q8WVX9 515 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 HSH2DQ96JZ2 352 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 COX4I2Q96KJ9 171 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 MTERF1Q99551 399 aaKnown RBP14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 BHLHE41Q9C0J9 482 aaPredicted RBP14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 CCDC90BQ9GZT6 254 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 SMG9Q9H0W8 520 aaKnown RBP14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 LTB4R2Q9NPC1 389 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 PDP1Q9P0J1 537 aaPredicted RBP14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 MARK1Q9P0L2 795 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 IL36AQ9UHA7 158 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 ATP6V1HQ9UI12 483 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 TRIM17Q9Y577 477 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 PCDHGB3Q9Y5G1 929 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 MGAT4DA6NG13 374 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 GABRR3A8MPY1 467 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 TMX2-CTNND1H3BSU7 103 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 FOXE1O00358 373 aaPredicted RBP14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 B3GALT4O96024 378 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 NAT2P11245 290 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 ACVR2AP27037 513 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 ETV3P41162 512 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 CLK3P49761 638 aaKnown RBP14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 GP2P55259 537 aaKnown RBP14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 NPTX1Q15818 432 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 ARSIQ5FYB1 569 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 LRRC73Q5JTD7 316 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 ERAP2Q6P179 960 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 MED27Q6P2C8 311 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 SLC16A12Q6ZSM3 486 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 NPAS3Q8IXF0 933 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 RASGEF1AQ8N9B8 481 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 OR7G3Q8NG95 312 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 GIPC3Q8TF64 312 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 ABTB1Q969K4 478 aaPredicted RBP14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 MED8Q96G25 268 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 PITX2Q99697 317 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 DGCR6LQ9BY27 220 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 RNF208Q9H0X6 261 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 RSPH9Q9H1X1 276 aaPredicted RBP14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 CHST8Q9H2A9 424 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 KRT84Q9NSB2 600 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 ATAD3AQ9NVI7 634 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 KIF17Q9P2E2 1029 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 FZD4Q9ULV1 537 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 CCL26Q9Y258 94 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 PADI2Q9Y2J8 665 aa14.93□□□□□ -0.02
TNFSF13-202ENST00000349228 C1orf226A1L170 272 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 OR2AG2A6NM03 316 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 FADS2P1A8MWK0 482 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 SUV39H1O43463 412 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 TSPAN6O43657 245 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 MITFO75030 526 aaPredicted RBP14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 GABARAPO95166 117 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 PTPN2P17706 415 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 IDSP22304 550 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 HTR1BP28222 390 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 RAE1P78406 368 aaKnown RBP14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 VLDLRP98155 873 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 RBBP4Q09028 425 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 TMEM115Q12893 351 aaPredicted RBP14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 RGNQ15493 299 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 SYT6Q5T7P8 510 aaPredicted RBP14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 TMCO2Q7Z6W1 182 aaPredicted RBP14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 B3GNT8Q7Z7M8 397 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 GALNT5Q7Z7M9 940 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 C1orf52Q8N6N3 182 aaKnown RBP14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 C11orf65Q8NCR3 313 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 GOT1L1Q8NHS2 421 aaPredicted RBP14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 ZFP90Q8TF47 636 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 SGCDQ92629 289 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 SH3KBP1Q96B97 665 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 WDR34Q96EX3 536 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 MRGPRX3Q96LB0 322 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 ZNF347Q96SE7 839 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 PKP4Q99569 1192 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 PAK1IP1Q9NWT1 392 aaPredicted RBP14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 PCDHGA4Q9Y5G9 962 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 DENND4CQ5VZ89 1909 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 E9PQ18 207 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 CCL16O15467 120 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 ZBTB11O95625 1053 aaPredicted RBP14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 CCL5P13501 91 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 IMPA1P29218 277 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 TIA1P31483 386 aaKnown RBP eCLIP14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 DDX39BQ13838 428 aaKnown RBP14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 SIM2Q14190 667 aaPredicted RBP14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 ZNF846Q147U1 533 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 CTF1Q16619 201 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 PROX2Q3B8N5 592 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 PAGE2BQ5JRK9 111 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 SLCO4C1Q6ZQN7 724 aa14.92□□□□□ -0.02
TNFSF13-202ENST00000349228 NLRP8Q86W28 1048 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms