RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 PLD3Q8IV08 490 aa25.94■■□□□ 1.74
SSBP4-202ENST00000348495 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP25.94■■□□□ 1.742e-7■■■■■ 278.5
SSBP4-202ENST00000348495 MTFMTQ96DP5 389 aaKnown RBP25.94■■□□□ 1.74
SSBP4-202ENST00000348495 PPP1R36Q96LQ0 422 aa25.94■■□□□ 1.74
SSBP4-202ENST00000348495 TMEM120AQ9BXJ8 343 aa25.94■■□□□ 1.74
SSBP4-202ENST00000348495 SYNPO2LQ9H987 977 aa25.94■■□□□ 1.74
SSBP4-202ENST00000348495 TMEM9Q9P0T7 183 aa25.94■■□□□ 1.74
SSBP4-202ENST00000348495 UNC13CQ8NB66 2214 aa25.94■■□□□ 1.74
SSBP4-202ENST00000348495 NDUFAB1O14561 156 aa25.94■■□□□ 1.74
SSBP4-202ENST00000348495 PRAMEF10O60809 474 aa25.94■■□□□ 1.74
SSBP4-202ENST00000348495 CTSVO60911 334 aa25.94■■□□□ 1.74
SSBP4-202ENST00000348495 BCL6P41182 706 aa25.94■■□□□ 1.74
SSBP4-202ENST00000348495 PIK3CBP42338 1070 aa25.94■■□□□ 1.74
SSBP4-202ENST00000348495 STPG1Q5TH74 334 aa25.94■■□□□ 1.74
SSBP4-202ENST00000348495 OR2T11Q8NH01 316 aa25.94■■□□□ 1.74
SSBP4-202ENST00000348495 WDR55Q9H6Y2 383 aaPredicted RBP25.94■■□□□ 1.74
SSBP4-202ENST00000348495 PFDN4Q9NQP4 134 aa25.94■■□□□ 1.74
SSBP4-202ENST00000348495 SLC9B1P1A6NJY1 282 aa25.93■■□□□ 1.74
SSBP4-202ENST00000348495 OR1F1O43749 312 aa25.93■■□□□ 1.74
SSBP4-202ENST00000348495 DIAPH2O60879 1101 aa25.93■■□□□ 1.74
SSBP4-202ENST00000348495 CPNE6O95741 557 aa25.93■■□□□ 1.74
SSBP4-202ENST00000348495 PCNAP12004 261 aa25.93■■□□□ 1.74
SSBP4-202ENST00000348495 EPHA3P29320 983 aa25.93■■□□□ 1.74
SSBP4-202ENST00000348495 ARFIP2P53365 341 aa25.93■■□□□ 1.74
SSBP4-202ENST00000348495 RBBP5Q15291 538 aaKnown RBP25.93■■□□□ 1.74
SSBP4-202ENST00000348495 CLPPQ16740 277 aaPredicted RBP25.93■■□□□ 1.74
SSBP4-202ENST00000348495 GKAP1Q5VSY0 366 aaPredicted RBP25.93■■□□□ 1.74
SSBP4-202ENST00000348495 Q6ZSR9 355 aa25.93■■□□□ 1.74
SSBP4-202ENST00000348495 RNF175Q8N4F7 328 aa25.93■■□□□ 1.74
SSBP4-202ENST00000348495 C19orf47Q8N9M1 422 aaKnown RBP25.93■■□□□ 1.74
SSBP4-202ENST00000348495 MTERF1Q99551 399 aaKnown RBP25.93■■□□□ 1.74
SSBP4-202ENST00000348495 PCDHGA4Q9Y5G9 962 aa25.93■■□□□ 1.74
SSBP4-202ENST00000348495 IGHV5-51A0A0C4DH38 117 aa25.92■■□□□ 1.74
SSBP4-202ENST00000348495 FOXE1O00358 373 aaPredicted RBP25.92■■□□□ 1.74
SSBP4-202ENST00000348495 AHRP35869 848 aa25.92■■□□□ 1.74
SSBP4-202ENST00000348495 TMEM71Q6P5X7 295 aa25.92■■□□□ 1.74
SSBP4-202ENST00000348495 TMPRSS9Q7Z410 1059 aa25.92■■□□□ 1.74
SSBP4-202ENST00000348495 PIP4P1Q86T03 277 aa25.92■■□□□ 1.74
SSBP4-202ENST00000348495 MFSD9Q8NBP5 474 aa25.92■■□□□ 1.74
SSBP4-202ENST00000348495 SEC16BQ96JE7 1060 aa25.92■■□□□ 1.74
SSBP4-202ENST00000348495 ACPTQ9BZG2 426 aa25.92■■□□□ 1.74
SSBP4-202ENST00000348495 CHRNA10Q9GZZ6 450 aa25.92■■□□□ 1.74
SSBP4-202ENST00000348495 BRF2Q9HAW0 419 aa25.92■■□□□ 1.74
SSBP4-202ENST00000348495 PDP2Q9P2J9 529 aa25.92■■□□□ 1.74
SSBP4-202ENST00000348495 ADGRE2Q9UHX3 823 aa25.92■■□□□ 1.74
SSBP4-202ENST00000348495 ATXN7L1Q9ULK2 861 aaPredicted RBP25.92■■□□□ 1.74
SSBP4-202ENST00000348495 PPT2Q9UMR5 302 aa25.92■■□□□ 1.74
SSBP4-202ENST00000348495 ZFHX2Q9C0A1 2572 aaPredicted RBP25.91■■□□□ 1.74
SSBP4-202ENST00000348495 ATP6AP2A0A1C7CYW4 349 aa25.91■■□□□ 1.74
SSBP4-202ENST00000348495 MAGEB17A8MXT2 336 aa25.91■■□□□ 1.74
SSBP4-202ENST00000348495 ATP6AP2O75787 350 aa25.91■■□□□ 1.74
SSBP4-202ENST00000348495 HSD3B1P14060 373 aa25.91■■□□□ 1.74
SSBP4-202ENST00000348495 HSD3B2P26439 372 aa25.91■■□□□ 1.74
SSBP4-202ENST00000348495 GSTM2P28161 218 aa25.91■■□□□ 1.74
SSBP4-202ENST00000348495 SERPINB1P30740 379 aa25.91■■□□□ 1.74
SSBP4-202ENST00000348495 ACADVLP49748 655 aa25.91■■□□□ 1.74
SSBP4-202ENST00000348495 RPS15AP62244 130 aaKnown RBP25.91■■□□□ 1.74
SSBP4-202ENST00000348495 CSTF3Q12996 717 aaKnown RBP25.91■■□□□ 1.74
SSBP4-202ENST00000348495 TUBB3Q13509 450 aa25.91■■□□□ 1.74
SSBP4-202ENST00000348495 ZNF574Q6ZN55 896 aaPredicted RBP25.91■■□□□ 1.74
SSBP4-202ENST00000348495 RNF44Q7L0R7 432 aa25.91■■□□□ 1.74
SSBP4-202ENST00000348495 PRSS42Q7Z5A4 293 aa25.91■■□□□ 1.74
SSBP4-202ENST00000348495 TBC1D19Q8N5T2 526 aa25.91■■□□□ 1.74
SSBP4-202ENST00000348495 GBP7Q8N8V2 638 aaPredicted RBP25.91■■□□□ 1.74
SSBP4-202ENST00000348495 TTLQ8NG68 377 aa25.91■■□□□ 1.74
SSBP4-202ENST00000348495 ACTRT2Q8TDY3 377 aa25.91■■□□□ 1.74
SSBP4-202ENST00000348495 OR2A5Q96R48 311 aa25.91■■□□□ 1.74
SSBP4-202ENST00000348495 OR52B2Q96RD2 323 aa25.91■■□□□ 1.74
SSBP4-202ENST00000348495 DMRT3Q9NQL9 472 aa25.91■■□□□ 1.74
SSBP4-202ENST00000348495 APOBEC2Q9Y235 224 aaKnown RBP25.91■■□□□ 1.74
SSBP4-202ENST00000348495 SLC28A1O00337 649 aa25.91■■□□□ 1.74
SSBP4-202ENST00000348495 NTN3O00634 580 aaPredicted RBP25.91■■□□□ 1.74
SSBP4-202ENST00000348495 TBX6O95947 436 aaPredicted RBP25.91■■□□□ 1.74
SSBP4-202ENST00000348495 PRR35P0CG20 571 aa25.91■■□□□ 1.74
SSBP4-202ENST00000348495 DDX39BQ13838 428 aaKnown RBP25.91■■□□□ 1.74
SSBP4-202ENST00000348495 LARP4Q71RC2 724 aaKnown RBP eCLIP25.91■■□□□ 1.74
SSBP4-202ENST00000348495 CCT6BQ92526 530 aa25.91■■□□□ 1.74
SSBP4-202ENST00000348495 TCTN2Q96GX1 697 aa25.91■■□□□ 1.74
SSBP4-202ENST00000348495 CDC6Q99741 560 aa25.91■■□□□ 1.74
SSBP4-202ENST00000348495 DPYSL5Q9BPU6 564 aa25.91■■□□□ 1.74
SSBP4-202ENST00000348495 FAM60AQ9NP50 221 aa25.91■■□□□ 1.74
SSBP4-202ENST00000348495 ZFP69BQ9UJL9 534 aa25.91■■□□□ 1.74
SSBP4-202ENST00000348495 AP1M2Q9Y6Q5 423 aa25.91■■□□□ 1.74
SSBP4-202ENST00000348495 ZNF292O60281 2723 aa25.9■■□□□ 1.74
SSBP4-202ENST00000348495 GOLGA8QA0A0J9YX86 632 aa25.9■■□□□ 1.74
SSBP4-202ENST00000348495 GOLGA8OA6NCC3 632 aa25.9■■□□□ 1.74
SSBP4-202ENST00000348495 NPIPB8E9PQR5 432 aa25.9■■□□□ 1.74
SSBP4-202ENST00000348495 GOLGA8NF8WBI6 632 aa25.9■■□□□ 1.74
SSBP4-202ENST00000348495 CACHD1Q5VU97 1274 aa25.9■■□□□ 1.74
SSBP4-202ENST00000348495 OR4D9Q8NGE8 314 aa25.9■■□□□ 1.74
SSBP4-202ENST00000348495 CREB3L4Q8TEY5 395 aa25.9■■□□□ 1.74
SSBP4-202ENST00000348495 THAP11Q96EK4 314 aa25.9■■□□□ 1.74
SSBP4-202ENST00000348495 FCRL4Q96PJ5 515 aa25.9■■□□□ 1.74
SSBP4-202ENST00000348495 ZFYVE21Q9BQ24 234 aa25.9■■□□□ 1.74
SSBP4-202ENST00000348495 ZMYND15Q9H091 742 aa25.9■■□□□ 1.74
SSBP4-202ENST00000348495 AKTIPQ9H8T0 292 aa25.9■■□□□ 1.74
SSBP4-202ENST00000348495 KLHL3Q9UH77 587 aa25.9■■□□□ 1.74
SSBP4-202ENST00000348495 MDC1Q14676 2089 aaKnown RBP25.89■■□□□ 1.74
SSBP4-202ENST00000348495 TOX3O15405 576 aaPredicted RBP25.89■■□□□ 1.74
SSBP4-202ENST00000348495 ZBTB11O95625 1053 aaPredicted RBP25.89■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms