RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 PPP1R3AQ16821 1122 aa12.61□□□□□ -0.39
CLCC1-202ENST00000348264 ATG9BQ674R7 924 aa12.61□□□□□ -0.39
CLCC1-202ENST00000348264 CAPN13Q6MZZ7 669 aaPredicted RBP12.61□□□□□ -0.39
CLCC1-202ENST00000348264 SBSNQ6UWP8 590 aa12.61□□□□□ -0.39
CLCC1-202ENST00000348264 CAPN12Q6ZSI9 719 aa12.61□□□□□ -0.39
CLCC1-202ENST00000348264 STRA8Q7Z7C7 330 aa12.61□□□□□ -0.39
CLCC1-202ENST00000348264 ZBED8Q8IZ13 594 aa12.61□□□□□ -0.39
CLCC1-202ENST00000348264 OR9A4Q8NGU2 314 aa12.61□□□□□ -0.39
CLCC1-202ENST00000348264 OR56A3Q8NH54 315 aa12.61□□□□□ -0.39
CLCC1-202ENST00000348264 ZCCHC10Q8TBK6 192 aa12.61□□□□□ -0.39
CLCC1-202ENST00000348264 TM9SF4Q92544 642 aa12.61□□□□□ -0.39
CLCC1-202ENST00000348264 FBXL8Q96CD0 374 aa12.61□□□□□ -0.39
CLCC1-202ENST00000348264 C19orf60Q96EN9 201 aa12.61□□□□□ -0.39
CLCC1-202ENST00000348264 THOC3Q96J01 351 aaKnown RBP12.61□□□□□ -0.39
CLCC1-202ENST00000348264 OR4K3Q96R72 315 aa12.61□□□□□ -0.39
CLCC1-202ENST00000348264 TGIF2Q9GZN2 237 aa12.61□□□□□ -0.39
CLCC1-202ENST00000348264 DPH5Q9H2P9 285 aa12.61□□□□□ -0.39
CLCC1-202ENST00000348264 ZNF160Q9HCG1 818 aa12.61□□□□□ -0.39
CLCC1-202ENST00000348264 MKKSQ9NPJ1 570 aaPredicted RBP12.61□□□□□ -0.39
CLCC1-202ENST00000348264 SMYD2Q9NRG4 433 aa12.61□□□□□ -0.39
CLCC1-202ENST00000348264 VPS4AQ9UN37 437 aa12.61□□□□□ -0.39
CLCC1-202ENST00000348264 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.61□□□□□ -0.39
CLCC1-202ENST00000348264 DIDO1Q9BTC0 2240 aaKnown RBP12.6□□□□□ -0.39
CLCC1-202ENST00000348264 DOPEY1Q5JWR5 2465 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 A0A1W2PQ72 361 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 NPEPPSL1A6NEC2 478 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 LCMT2O60294 686 aaKnown RBP12.6□□□□□ -0.39
CLCC1-202ENST00000348264 JRKO75564 520 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 GUCA1CO95843 209 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 ENO2P09104 434 aaPredicted RBP12.6□□□□□ -0.39
CLCC1-202ENST00000348264 HIST1H2AGP0C0S8 130 aaPredicted RBP12.6□□□□□ -0.39
CLCC1-202ENST00000348264 IL1RNP18510 177 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 HIST1H2ADP20671 130 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 SAT1P21673 171 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 EMP2P54851 167 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 TAS2R39P59534 338 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 MEF2AQ02078 507 aaPredicted RBP12.6□□□□□ -0.39
CLCC1-202ENST00000348264 CBLBQ13191 982 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 NDUFA9Q16795 377 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 AGAP7PQ5VUJ5 663 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 DUPD1Q68J44 220 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 FAAH2Q6GMR7 532 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 TMEM214Q6NUQ4 689 aaKnown RBP12.6□□□□□ -0.39
CLCC1-202ENST00000348264 Q6ZS92 163 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 CUZD1Q86UP6 607 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 SLC26A11Q86WA9 606 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 IQCKQ8N0W5 287 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 ZADH2Q8N4Q0 377 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 FAM26EQ8N5C1 309 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 SPATA4Q8NEY3 305 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 TM4SF19Q96DZ7 209 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 THAP11Q96EK4 314 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 PDLIM5Q96HC4 596 aaKnown RBP12.6□□□□□ -0.39
CLCC1-202ENST00000348264 VPS50Q96JG6 964 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 HIST1H2AHQ96KK5 128 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 AGAP4Q96P64 663 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 HIST1H2AJQ99878 128 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 WDR77Q9BQA1 342 aaPredicted RBP12.6□□□□□ -0.39
CLCC1-202ENST00000348264 ERP44Q9BS26 406 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 HAUS8Q9BT25 410 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 MCMBPQ9BTE3 642 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 H2AFJQ9BTM1 129 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 LHPPQ9H008 270 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 ILKAPQ9H0C8 392 aaPredicted RBP12.6□□□□□ -0.39
CLCC1-202ENST00000348264 GRHL1Q9NZI5 618 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 MAP10Q9P2G4 905 aa12.6□□□□□ -0.39
CLCC1-202ENST00000348264 IGHV1-45A0A0A0MS14 117 aa12.59□□□□□ -0.39
CLCC1-202ENST00000348264 PABPN1LA6NDY0 278 aaKnown RBP12.59□□□□□ -0.39
CLCC1-202ENST00000348264 FAM187AA6NFU0 413 aa12.59□□□□□ -0.39
CLCC1-202ENST00000348264 TCP11X1B4DZS4 312 aa12.59□□□□□ -0.39
CLCC1-202ENST00000348264 CDC7O00311 574 aa12.59□□□□□ -0.39
CLCC1-202ENST00000348264 NSA2O95478 260 aaKnown RBP12.59□□□□□ -0.39
CLCC1-202ENST00000348264 HEXBP07686 556 aa12.59□□□□□ -0.39
CLCC1-202ENST00000348264 CELA2AP08217 269 aa12.59□□□□□ -0.39
CLCC1-202ENST00000348264 AVPR1BP47901 424 aa12.59□□□□□ -0.39
CLCC1-202ENST00000348264 IRAK1BP1Q5VVH5 260 aa12.59□□□□□ -0.39
CLCC1-202ENST00000348264 IGFL2Q6UWQ7 119 aa12.59□□□□□ -0.39
CLCC1-202ENST00000348264 NDUFAF7Q7L592 441 aa12.59□□□□□ -0.39
CLCC1-202ENST00000348264 ASPGQ86U10 573 aa12.59□□□□□ -0.39
CLCC1-202ENST00000348264 PDSS2Q86YH6 399 aa12.59□□□□□ -0.39
CLCC1-202ENST00000348264 CEP97Q8IW35 865 aa12.59□□□□□ -0.39
CLCC1-202ENST00000348264 AMER2Q8N7J2 671 aa12.59□□□□□ -0.39
CLCC1-202ENST00000348264 MFSD9Q8NBP5 474 aa12.59□□□□□ -0.39
CLCC1-202ENST00000348264 KCT2Q8NC54 265 aa12.59□□□□□ -0.39
CLCC1-202ENST00000348264 CAMKVQ8NCB2 501 aa12.59□□□□□ -0.39
CLCC1-202ENST00000348264 ABHD11Q8NFV4 315 aa12.59□□□□□ -0.39
CLCC1-202ENST00000348264 PPP4R1Q8TF05 950 aa12.59□□□□□ -0.39
CLCC1-202ENST00000348264 SNRNP40Q96DI7 357 aaKnown RBP12.59□□□□□ -0.39
CLCC1-202ENST00000348264 VPS39Q96JC1 886 aa12.59□□□□□ -0.39
CLCC1-202ENST00000348264 TRIM54Q9BYV2 358 aa12.59□□□□□ -0.39
CLCC1-202ENST00000348264 VN1R1Q9GZP7 353 aa12.59□□□□□ -0.39
CLCC1-202ENST00000348264 SPNS1Q9H2V7 528 aa12.59□□□□□ -0.39
CLCC1-202ENST00000348264 RHOJQ9H4E5 214 aa12.59□□□□□ -0.39
CLCC1-202ENST00000348264 SAYSD1Q9NPB0 183 aa12.59□□□□□ -0.39
CLCC1-202ENST00000348264 ASF1BQ9NVP2 202 aa12.59□□□□□ -0.39
CLCC1-202ENST00000348264 HCN3Q9P1Z3 774 aa12.59□□□□□ -0.39
CLCC1-202ENST00000348264 WHRNQ9P202 907 aa12.59□□□□□ -0.39
CLCC1-202ENST00000348264 MKL2Q9ULH7 1088 aa12.59□□□□□ -0.39
CLCC1-202ENST00000348264 NOVA2Q9UNW9 492 aaKnown RBP12.59□□□□□ -0.39
CLCC1-202ENST00000348264 PCDHGA10Q9Y5H3 936 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms