RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 KIAA1549LQ6ZVL6 1849 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 ANTXRLA6NF34 631 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 OTOL1A6NHN0 477 aaPredicted RBP14.88□□□□□ -0.03
UPF3B-202ENST00000345865 TMEM229AB2RXF0 380 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 GBAP04062 536 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 ADH5P11766 374 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 HSD3B1P14060 373 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 HSD3B2P26439 372 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 VIPR2P41587 438 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 SLC6A11P48066 632 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 RPS6KA3P51812 740 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 IQCCQ4KMZ1 466 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 CPTPQ5TA50 214 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 LAIR1Q6GTX8 287 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 CBLL1Q75N03 491 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 BPIFB6Q8NFQ5 453 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 HCAR2Q8TDS4 363 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 ARRDC3Q96B67 414 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 TBC1D20Q96BZ9 403 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 ZNF707Q96C28 371 aaPredicted RBP14.88□□□□□ -0.03
UPF3B-202ENST00000345865 HSH2DQ96JZ2 352 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 ZFYVE19Q96K21 471 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 CNDP2Q96KP4 475 aaKnown RBP14.88□□□□□ -0.03
UPF3B-202ENST00000345865 MYOCQ99972 504 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 ETAA1Q9NY74 926 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 FZD4Q9ULV1 537 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 MYO1GB0I1T2 1018 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 SLC1A7O00341 560 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 FGBP02675 491 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 CYP4B1P13584 511 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 IGFBP5P24593 272 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 GSTM2P28161 218 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 ZC3H12BQ5HYM0 836 aaKnown RBP14.88□□□□□ -0.03
UPF3B-202ENST00000345865 PDE12Q6L8Q7 609 aaKnown RBP14.88□□□□□ -0.03
UPF3B-202ENST00000345865 ZNF547Q8IVP9 402 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 SYTL1Q8IYJ3 562 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 NRSN1Q8IZ57 195 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 PIK3C3Q8NEB9 887 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 FBLIM1Q8WUP2 373 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 GABARAPL1Q9H0R8 117 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 SPNS1Q9H2V7 528 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 TM9SF3Q9HD45 589 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 GPATCH2Q9NW75 528 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 PCYT1BQ9Y5K3 369 aaPredicted RBP14.88□□□□□ -0.03
UPF3B-202ENST00000345865 KCNE2Q9Y6J6 123 aa14.88□□□□□ -0.03
UPF3B-202ENST00000345865 BCKDKO14874 412 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 XPNPEP2O43895 674 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 GCM2O75603 506 aaPredicted RBP14.87□□□□□ -0.03
UPF3B-202ENST00000345865 MYO1DO94832 1006 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 NTRK1P04629 796 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 FABP3P05413 133 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 EPHA2P29317 976 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 HOXA9P31269 272 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 CLK3P49761 638 aaKnown RBP14.87□□□□□ -0.03
UPF3B-202ENST00000345865 VASPP50552 380 aaPredicted RBP14.87□□□□□ -0.03
UPF3B-202ENST00000345865 PLA2G16P53816 162 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 CASP9P55211 416 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 MEF2AQ02078 507 aaPredicted RBP14.87□□□□□ -0.03
UPF3B-202ENST00000345865 CDK5R2Q13319 367 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 TSTA3Q13630 321 aaPredicted RBP14.87□□□□□ -0.03
UPF3B-202ENST00000345865 SIM2Q14190 667 aaPredicted RBP14.87□□□□□ -0.03
UPF3B-202ENST00000345865 KDM4DQ6B0I6 523 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 EIF3MQ7L2H7 374 aaKnown RBP14.87□□□□□ -0.03
UPF3B-202ENST00000345865 ARMCX6Q7L4S7 300 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 CAMKMTQ7Z624 323 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 SP7Q8TDD2 431 aaPredicted RBP14.87□□□□□ -0.03
UPF3B-202ENST00000345865 ZFP90Q8TF47 636 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 COQ8BQ96D53 544 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 ERLEC1Q96DZ1 483 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 METTL2AQ96IZ6 378 aaKnown RBP14.87□□□□□ -0.03
UPF3B-202ENST00000345865 FOPNLQ96NB1 174 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 GNG14A0A1W2PPG7 69 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 PTGES3LE9PB15 166 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 PSMD11O00231 422 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 SAP18O00422 153 aaKnown RBP14.87□□□□□ -0.03
UPF3B-202ENST00000345865 AXIN1O15169 862 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 KLHL18O94889 574 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 ZNF182P17025 639 aaPredicted RBP14.87□□□□□ -0.03
UPF3B-202ENST00000345865 ZNF8P17098 575 aaPredicted RBP14.87□□□□□ -0.03
UPF3B-202ENST00000345865 FSHRP23945 695 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 AQP1P29972 269 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 TIA1P31483 386 aaKnown RBP eCLIP14.87□□□□□ -0.03
UPF3B-202ENST00000345865 RYKP34925 604 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 GALK1P51570 392 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 DDX59Q5T1V6 619 aaKnown RBP eCLIP14.87□□□□□ -0.03
UPF3B-202ENST00000345865 C9orf64Q5T6V5 341 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 IER5LQ5T953 404 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 ERICH5Q6P6B1 374 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 ZNF852Q6ZMS4 543 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 TRAPPC5Q8IUR0 188 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 ZC3H7AQ8IWR0 971 aaKnown RBP14.87□□□□□ -0.03
UPF3B-202ENST00000345865 NAGSQ8N159 534 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 CPA6Q8N4T0 437 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 OR4K1Q8NGD4 311 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.87□□□□□ -0.03
UPF3B-202ENST00000345865 RAD9AQ99638 391 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 SIRT5Q9NXA8 310 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 BTNL2Q9UIR0 455 aa14.87□□□□□ -0.03
UPF3B-202ENST00000345865 TRANK1O15050 2925 aa14.86□□□□□ -0.03
UPF3B-202ENST00000345865 SOBPA7XYQ1 873 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms