RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 UGDHO60701 494 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 KIAA0754O94854 1291 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 LIPCP11150 499 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 PIM1P11309 404 aaPredicted RBP11.32□□□□□ -0.6
SNCA-202ENST00000345009 CPA3P15088 417 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 H2AFXP16104 143 aaPredicted RBP11.32□□□□□ -0.6
SNCA-202ENST00000345009 AGXTP21549 392 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 EEF1DP29692 281 aaKnown RBP11.32□□□□□ -0.6
SNCA-202ENST00000345009 AHRP35869 848 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 ARL1P40616 181 aaPredicted RBP11.32□□□□□ -0.6
SNCA-202ENST00000345009 GABRA4P48169 554 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 AGTR2P50052 363 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 ARF3P61204 181 aaPredicted RBP11.32□□□□□ -0.6
SNCA-202ENST00000345009 HERVK_113P63132 956 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 SKP1P63208 163 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 YBX1P67809 324 aaKnown RBP11.32□□□□□ -0.6
SNCA-202ENST00000345009 NFKB2Q00653 900 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 GTF2H2Q13888 395 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 MAP7Q14244 749 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 RBBP5Q15291 538 aaKnown RBP11.32□□□□□ -0.6
SNCA-202ENST00000345009 TBCCQ15814 346 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 NDUFA9Q16795 377 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 DEFB110Q30KQ9 67 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 WASHC2DQ5SRD0 308 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 DESI1Q6ICB0 168 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 GTF2H2CQ6P1K8 395 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 C16orf46Q6P387 395 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 TMIGD1Q6UXZ0 262 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 SLCO4C1Q6ZQN7 724 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 NLGN4XQ8N0W4 816 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 CSNK1A1LQ8N752 337 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 BANPQ8N9N5 519 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 MFSD9Q8NBP5 474 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 TRPV3Q8NET8 790 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 NLGN4YQ8NFZ3 816 aaPredicted RBP11.32□□□□□ -0.6
SNCA-202ENST00000345009 SNIP1Q8TAD8 396 aaKnown RBP11.32□□□□□ -0.6
SNCA-202ENST00000345009 ESAMQ96AP7 390 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 KIAA1143Q96AT1 154 aaPredicted RBP11.32□□□□□ -0.6
SNCA-202ENST00000345009 PTCD3Q96EY7 689 aaKnown RBP11.32□□□□□ -0.6
SNCA-202ENST00000345009 LRFN5Q96NI6 719 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 OR2A5Q96R48 311 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 EFHD1Q9BUP0 239 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 SARGQ9BW04 601 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 ERVK-6Q9BXR3 956 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 DPH1Q9BZG8 443 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 SPRTNQ9H040 489 aaPredicted RBP11.32□□□□□ -0.6
SNCA-202ENST00000345009 DRC3Q9H069 523 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 IPPKQ9H8X2 491 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 ACTR8Q9H981 624 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 VIPAS39Q9H9C1 493 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 SSU72Q9NP77 194 aaKnown RBP11.32□□□□□ -0.6
SNCA-202ENST00000345009 FOXJ2Q9P0K8 574 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 ZFP69BQ9UJL9 534 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 STK38LQ9Y2H1 464 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 PLLPQ9Y342 182 aa11.32□□□□□ -0.6
SNCA-202ENST00000345009 TMEM184BQ9Y519 407 aaPredicted RBP11.32□□□□□ -0.6
SNCA-202ENST00000345009 DMXL2Q8TDJ6 3036 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 HYKKA2RU49 373 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 URADA6NGE7 173 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 ANKDD1BA6NHY2 528 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 A8MT66 165 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 FOXO6A8MYZ6 492 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 C1QTNF9BB2RNN3 333 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 DLX3O60479 287 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 PLIN3O60664 434 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 SUPT7LO94864 414 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 PROCP04070 461 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 NTRK1P04629 796 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 CD63P08962 238 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 SLC35G6P0C7Q6 338 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 C1QTNF9P0C862 333 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 IMPDH1P20839 514 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 ALAS2P22557 587 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 HNF4AP41235 474 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 CASP2P42575 452 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 CCNG1P51959 295 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 PRKAA2P54646 552 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 RGS1Q08116 209 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 PCDH1Q08174 1060 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 ABHD18Q0P651 414 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 CHIT1Q13231 466 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 PWP1Q13610 501 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 MUM1Q2TAK8 710 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 TUSC1Q2TAM9 212 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 FBXO48Q5FWF7 155 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 CFAP157Q5JU67 520 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 CATSPEREQ5SY80 951 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 GARNL3Q5VVW2 1013 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 LIPJQ5W064 366 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 RHBDD2Q6NTF9 364 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 ZYG11AQ6WRX3 759 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 ASPGQ86U10 573 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 ZFAND4Q86XD8 727 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 HOMEZQ8IX15 550 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 TMEM151AQ8N4L1 468 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 IL22RA1Q8N6P7 574 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 PROKR1Q8TCW9 393 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 KCNE4Q8WWG9 221 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 SLC13A3Q8WWT9 602 aa11.31□□□□□ -0.6
SNCA-202ENST00000345009 ZCCHC14Q8WYQ9 949 aaKnown RBP11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms