RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 I3L1I5 382 aaPredicted RBP13.7□□□□□ -0.22
HMGN3-202ENST00000344726 DPM1O60762 260 aa13.7□□□□□ -0.22
HMGN3-202ENST00000344726 ENO2P09104 434 aaPredicted RBP13.7□□□□□ -0.22
HMGN3-202ENST00000344726 GNLYP22749 145 aa13.7□□□□□ -0.22
HMGN3-202ENST00000344726 CCND1P24385 295 aa13.7□□□□□ -0.22
HMGN3-202ENST00000344726 HRH2P25021 359 aa13.7□□□□□ -0.22
HMGN3-202ENST00000344726 SLC26A3P40879 764 aa13.7□□□□□ -0.22
HMGN3-202ENST00000344726 EFNA3P52797 238 aa13.7□□□□□ -0.22
HMGN3-202ENST00000344726 SOX8P57073 446 aa13.7□□□□□ -0.22
HMGN3-202ENST00000344726 RPS15AP62244 130 aaKnown RBP13.7□□□□□ -0.22
HMGN3-202ENST00000344726 SLC7A5Q01650 507 aa13.7□□□□□ -0.22
HMGN3-202ENST00000344726 MEF2AQ02078 507 aaPredicted RBP13.7□□□□□ -0.22
HMGN3-202ENST00000344726 Q0VFX4 171 aa13.7□□□□□ -0.22
HMGN3-202ENST00000344726 UBAP2LQ14157 1087 aaKnown RBP13.7□□□□□ -0.22
HMGN3-202ENST00000344726 MYBPC3Q14896 1274 aa13.7□□□□□ -0.22
HMGN3-202ENST00000344726 CAPN13Q6MZZ7 669 aaPredicted RBP13.7□□□□□ -0.22
HMGN3-202ENST00000344726 NKAPQ8N5F7 415 aaKnown RBP13.7□□□□□ -0.22
HMGN3-202ENST00000344726 AMER2Q8N7J2 671 aa13.7□□□□□ -0.22
HMGN3-202ENST00000344726 CLEC1AQ8NC01 280 aa13.7□□□□□ -0.22
HMGN3-202ENST00000344726 NACC2Q96BF6 587 aa13.7□□□□□ -0.22
HMGN3-202ENST00000344726 MIEF2Q96C03 454 aa13.7□□□□□ -0.22
HMGN3-202ENST00000344726 TM4SF19Q96DZ7 209 aa13.7□□□□□ -0.22
HMGN3-202ENST00000344726 MVB12AQ96EY5 273 aa13.7□□□□□ -0.22
HMGN3-202ENST00000344726 MMABQ96EY8 250 aaPredicted RBP13.7□□□□□ -0.22
HMGN3-202ENST00000344726 CRB3Q9BUF7 120 aa13.7□□□□□ -0.22
HMGN3-202ENST00000344726 UNKQ9C0B0 810 aaKnown RBP13.7□□□□□ -0.22
HMGN3-202ENST00000344726 DRC3Q9H069 523 aa13.7□□□□□ -0.22
HMGN3-202ENST00000344726 RAB17Q9H0T7 212 aa13.7□□□□□ -0.22
HMGN3-202ENST00000344726 SPNS1Q9H2V7 528 aa13.7□□□□□ -0.22
HMGN3-202ENST00000344726 SEMA3GQ9NS98 782 aa13.7□□□□□ -0.22
HMGN3-202ENST00000344726 TRPC4Q9UBN4 977 aa13.7□□□□□ -0.22
HMGN3-202ENST00000344726 NOVA2Q9UNW9 492 aaKnown RBP13.7□□□□□ -0.22
HMGN3-202ENST00000344726 CSAG2Q9Y5P2 127 aa13.7□□□□□ -0.22
HMGN3-202ENST00000344726 ESPL1Q14674 2120 aa13.69□□□□□ -0.22
HMGN3-202ENST00000344726 ESYT3A0FGR9 886 aa13.69□□□□□ -0.22
HMGN3-202ENST00000344726 TXNDC9O14530 226 aa13.69□□□□□ -0.22
HMGN3-202ENST00000344726 MAT1AQ00266 395 aaKnown RBP13.69□□□□□ -0.22
HMGN3-202ENST00000344726 OCA2Q04671 838 aa13.69□□□□□ -0.22
HMGN3-202ENST00000344726 FAM53BQ14153 422 aa13.69□□□□□ -0.22
HMGN3-202ENST00000344726 INPP5JQ15735 1006 aaPredicted RBP13.69□□□□□ -0.22
HMGN3-202ENST00000344726 RBBP7Q16576 425 aa13.69□□□□□ -0.22
HMGN3-202ENST00000344726 PLEKHN1Q494U1 663 aaPredicted RBP13.69□□□□□ -0.22
HMGN3-202ENST00000344726 CATSPEREQ5SY80 951 aa13.69□□□□□ -0.22
HMGN3-202ENST00000344726 C3orf62Q6ZUJ4 267 aa13.69□□□□□ -0.22
HMGN3-202ENST00000344726 CYS1Q717R9 158 aa13.69□□□□□ -0.22
HMGN3-202ENST00000344726 CCDC25Q86WR0 208 aa13.69□□□□□ -0.22
HMGN3-202ENST00000344726 ZNF740Q8NDX6 193 aa13.69□□□□□ -0.22
HMGN3-202ENST00000344726 ABHD11Q8NFV4 315 aa13.69□□□□□ -0.22
HMGN3-202ENST00000344726 OR11G2Q8NGC1 345 aa13.69□□□□□ -0.22
HMGN3-202ENST00000344726 OR4K1Q8NGD4 311 aa13.69□□□□□ -0.22
HMGN3-202ENST00000344726 OR9A4Q8NGU2 314 aa13.69□□□□□ -0.22
HMGN3-202ENST00000344726 PNPLA2Q96AD5 504 aa13.69□□□□□ -0.22
HMGN3-202ENST00000344726 C8orf44Q96CB5 159 aa13.69□□□□□ -0.22
HMGN3-202ENST00000344726 C19orf60Q96EN9 201 aa13.69□□□□□ -0.22
HMGN3-202ENST00000344726 RBBP8Q99708 897 aa13.69□□□□□ -0.22
HMGN3-202ENST00000344726 HAUS8Q9BT25 410 aa13.69□□□□□ -0.22
HMGN3-202ENST00000344726 LRRC1Q9BTT6 524 aa13.69□□□□□ -0.22
HMGN3-202ENST00000344726 TRIM54Q9BYV2 358 aa13.69□□□□□ -0.22
HMGN3-202ENST00000344726 PHACTR1Q9C0D0 580 aa13.69□□□□□ -0.22
HMGN3-202ENST00000344726 LRRC4CQ9HCJ2 640 aa13.69□□□□□ -0.22
HMGN3-202ENST00000344726 GPAMQ9HCL2 828 aa13.69□□□□□ -0.22
HMGN3-202ENST00000344726 ATP13A2Q9NQ11 1180 aa13.69□□□□□ -0.22
HMGN3-202ENST00000344726 C5AR2Q9P296 337 aa13.69□□□□□ -0.22
HMGN3-202ENST00000344726 C3orf18Q9UK00 162 aa13.69□□□□□ -0.22
HMGN3-202ENST00000344726 CDC14AQ9UNH5 594 aa13.69□□□□□ -0.22
HMGN3-202ENST00000344726 CPAMD8Q8IZJ3 1885 aa13.68□□□□□ -0.22
HMGN3-202ENST00000344726 CTAGE15A4D2H0 777 aa13.68□□□□□ -0.22
HMGN3-202ENST00000344726 PHGDHO43175 533 aaKnown RBP13.68□□□□□ -0.22
HMGN3-202ENST00000344726 FAM155BO75949 473 aa13.68□□□□□ -0.22
HMGN3-202ENST00000344726 IGHEP01854 428 aa13.68□□□□□ -0.22
HMGN3-202ENST00000344726 GMPRP36959 345 aa13.68□□□□□ -0.22
HMGN3-202ENST00000344726 MAGEA4P43358 317 aa13.68□□□□□ -0.22
HMGN3-202ENST00000344726 POU4F1Q01851 419 aa13.68□□□□□ -0.22
HMGN3-202ENST00000344726 GUCY2DQ02846 1103 aa13.68□□□□□ -0.22
HMGN3-202ENST00000344726 CAV1Q03135 178 aa13.68□□□□□ -0.22
HMGN3-202ENST00000344726 AIMP2Q13155 320 aaKnown RBP13.68□□□□□ -0.22
HMGN3-202ENST00000344726 TSNQ15631 228 aaKnown RBP13.68□□□□□ -0.22
HMGN3-202ENST00000344726 C18orf21Q32NC0 220 aaPredicted RBP13.68□□□□□ -0.22
HMGN3-202ENST00000344726 TUBB8Q3ZCM7 444 aa13.68□□□□□ -0.22
HMGN3-202ENST00000344726 KBTBD12Q3ZCT8 623 aa13.68□□□□□ -0.22
HMGN3-202ENST00000344726 ATG9BQ674R7 924 aa13.68□□□□□ -0.22
HMGN3-202ENST00000344726 TMEM214Q6NUQ4 689 aaKnown RBP13.68□□□□□ -0.22
HMGN3-202ENST00000344726 IGFL3Q6UXB1 125 aa13.68□□□□□ -0.22
HMGN3-202ENST00000344726 CTAGE6Q86UF2 777 aa13.68□□□□□ -0.22
HMGN3-202ENST00000344726 ATCAYQ86WG3 371 aa13.68□□□□□ -0.22
HMGN3-202ENST00000344726 ZC3H7AQ8IWR0 971 aaKnown RBP13.68□□□□□ -0.22
HMGN3-202ENST00000344726 SPATA6LQ8N4H0 392 aa13.68□□□□□ -0.22
HMGN3-202ENST00000344726 MFSD9Q8NBP5 474 aa13.68□□□□□ -0.22
HMGN3-202ENST00000344726 KCT2Q8NC54 265 aa13.68□□□□□ -0.22
HMGN3-202ENST00000344726 ZCCHC10Q8TBK6 192 aa13.68□□□□□ -0.22
HMGN3-202ENST00000344726 ATL1Q8WXF7 558 aa13.68□□□□□ -0.22
HMGN3-202ENST00000344726 ANKRD7Q92527 254 aa13.68□□□□□ -0.22
HMGN3-202ENST00000344726 NEIL2Q969S2 332 aa13.68□□□□□ -0.22
HMGN3-202ENST00000344726 THAP11Q96EK4 314 aa13.68□□□□□ -0.22
HMGN3-202ENST00000344726 MOCOSQ96EN8 888 aa13.68□□□□□ -0.22
HMGN3-202ENST00000344726 GPR22Q99680 433 aa13.68□□□□□ -0.22
HMGN3-202ENST00000344726 CPNE1Q99829 537 aa13.68□□□□□ -0.22
HMGN3-202ENST00000344726 SARGQ9BW04 601 aa13.68□□□□□ -0.22
HMGN3-202ENST00000344726 YIPF2Q9BWQ6 316 aa13.68□□□□□ -0.22
HMGN3-202ENST00000344726 POPDC3Q9HBV1 291 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms