RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 EIF2B5Q13144 721 aaKnown RBP13.04□□□□□ -0.32
CDC42-202ENST00000344548 KRT33BQ14525 404 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 ICE2Q659A1 982 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 COMMD6Q7Z4G1 85 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 PHACTR4Q8IZ21 702 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 GLB1L3Q8NCI6 653 aaPredicted RBP13.04□□□□□ -0.32
CDC42-202ENST00000344548 ABHD11Q8NFV4 315 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 OR4E2Q8NGC2 313 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 SNX19Q92543 992 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 SLC6A18Q96N87 628 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 ZBTB18Q99592 522 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 MACROD1Q9BQ69 325 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 HAUS8Q9BT25 410 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 PAIP1Q9H074 479 aaKnown RBP13.04□□□□□ -0.32
CDC42-202ENST00000344548 ALG2Q9H553 416 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 WASH6PQ9NQA3 447 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 HS3ST3A1Q9Y663 406 aa13.04□□□□□ -0.32
CDC42-202ENST00000344548 PRAMEF26H0Y7S4 382 aa13.03□□□□□ -0.32
CDC42-202ENST00000344548 FOXE1O00358 373 aaPredicted RBP13.03□□□□□ -0.32
CDC42-202ENST00000344548 LAMP1P11279 417 aa13.03□□□□□ -0.32
CDC42-202ENST00000344548 HSD3B1P14060 373 aa13.03□□□□□ -0.32
CDC42-202ENST00000344548 HSD17B1P14061 328 aa13.03□□□□□ -0.32
CDC42-202ENST00000344548 HOXB9P17482 250 aaPredicted RBP13.03□□□□□ -0.32
CDC42-202ENST00000344548 HSD3B2P26439 372 aa13.03□□□□□ -0.32
CDC42-202ENST00000344548 GCKP35557 465 aa13.03□□□□□ -0.32
CDC42-202ENST00000344548 MC1RQ01726 317 aa13.03□□□□□ -0.32
CDC42-202ENST00000344548 FOXM1Q08050 763 aa13.03□□□□□ -0.32
CDC42-202ENST00000344548 PRSS53Q2L4Q9 553 aa13.03□□□□□ -0.32
CDC42-202ENST00000344548 PAGE2BQ5JRK9 111 aa13.03□□□□□ -0.32
CDC42-202ENST00000344548 SPPL2CQ8IUH8 684 aa13.03□□□□□ -0.32
CDC42-202ENST00000344548 MMP21Q8N119 569 aa13.03□□□□□ -0.32
CDC42-202ENST00000344548 OR4K1Q8NGD4 311 aa13.03□□□□□ -0.32
CDC42-202ENST00000344548 TESCQ96BS2 214 aa13.03□□□□□ -0.32
CDC42-202ENST00000344548 ANKRD27Q96NW4 1050 aa13.03□□□□□ -0.32
CDC42-202ENST00000344548 REXO4Q9GZR2 422 aaKnown RBP13.03□□□□□ -0.32
CDC42-202ENST00000344548 AICDAQ9GZX7 198 aa13.03□□□□□ -0.32
CDC42-202ENST00000344548 SLC6A20Q9NP91 592 aa13.03□□□□□ -0.32
CDC42-202ENST00000344548 FBXL21Q9UKT6 434 aa13.03□□□□□ -0.32
CDC42-202ENST00000344548 RUVBL1Q9Y265 456 aaKnown RBP13.03□□□□□ -0.32
CDC42-202ENST00000344548 PCDHB14Q9Y5E9 798 aa13.03□□□□□ -0.32
CDC42-202ENST00000344548 TRBV5-3A0A0A0MS03 114 aa13.02□□□□□ -0.32
CDC42-202ENST00000344548 DYTNA2CJ06 578 aa13.02□□□□□ -0.32
CDC42-202ENST00000344548 GABRR3A8MPY1 467 aa13.02□□□□□ -0.32
CDC42-202ENST00000344548 KCNJ13O60928 360 aa13.02□□□□□ -0.32
CDC42-202ENST00000344548 CCR5P51681 352 aa13.02□□□□□ -0.32
CDC42-202ENST00000344548 PRDX1Q06830 199 aaKnown RBP13.02□□□□□ -0.32
CDC42-202ENST00000344548 SLC14A1Q13336 389 aa13.02□□□□□ -0.32
CDC42-202ENST00000344548 FZD2Q14332 565 aa13.02□□□□□ -0.32
CDC42-202ENST00000344548 WLSQ5T9L3 541 aa13.02□□□□□ -0.32
CDC42-202ENST00000344548 ZNF551Q7Z340 670 aaPredicted RBP13.02□□□□□ -0.32
CDC42-202ENST00000344548 CLECL1Q8IZS7 167 aa13.02□□□□□ -0.32
CDC42-202ENST00000344548 OR2L8Q8NGY9 312 aa13.02□□□□□ -0.32
CDC42-202ENST00000344548 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.02□□□□□ -0.321e-323■■■■■ 34.4
CDC42-202ENST00000344548 F2RL3Q96RI0 385 aa13.02□□□□□ -0.32
CDC42-202ENST00000344548 ZNF717Q9BY31 904 aaPredicted RBP13.02□□□□□ -0.32
CDC42-202ENST00000344548 C15orf41Q9Y2V0 281 aa13.02□□□□□ -0.32
CDC42-202ENST00000344548 TNFRSF10CO14798 259 aa13.02□□□□□ -0.33
CDC42-202ENST00000344548 PCDH7O60245 1069 aa13.02□□□□□ -0.33
CDC42-202ENST00000344548 KCNH1O95259 989 aa13.02□□□□□ -0.33
CDC42-202ENST00000344548 WNT1P04628 370 aa13.02□□□□□ -0.33
CDC42-202ENST00000344548 ACPPP15309 386 aa13.02□□□□□ -0.33
CDC42-202ENST00000344548 TIA1P31483 386 aaKnown RBP eCLIP13.02□□□□□ -0.331e-6■■■□□ 18.3
CDC42-202ENST00000344548 S100A3P33764 101 aa13.02□□□□□ -0.33
CDC42-202ENST00000344548 GRIA3P42263 894 aa13.02□□□□□ -0.33
CDC42-202ENST00000344548 YPEL5P62699 121 aa13.02□□□□□ -0.33
CDC42-202ENST00000344548 MTAPQ13126 283 aa13.02□□□□□ -0.33
CDC42-202ENST00000344548 C1orf61Q13536 156 aa13.02□□□□□ -0.33
CDC42-202ENST00000344548 HIST2H2ACQ16777 129 aaPredicted RBP13.02□□□□□ -0.33
CDC42-202ENST00000344548 ZNF385BQ569K4 471 aa13.02□□□□□ -0.33
CDC42-202ENST00000344548 HIST2H2AA3Q6FI13 130 aa13.02□□□□□ -0.33
CDC42-202ENST00000344548 FAM180BQ6P0A1 224 aa13.02□□□□□ -0.33
CDC42-202ENST00000344548 PRMT9Q6P2P2 845 aa13.02□□□□□ -0.33
CDC42-202ENST00000344548 AMER3Q8N944 861 aa13.02□□□□□ -0.33
CDC42-202ENST00000344548 ZNF583Q96ND8 569 aa13.02□□□□□ -0.33
CDC42-202ENST00000344548 MVB12BQ9H7P6 319 aa13.02□□□□□ -0.33
CDC42-202ENST00000344548 COPS7BQ9H9Q2 264 aaPredicted RBP13.02□□□□□ -0.33
CDC42-202ENST00000344548 WNT16Q9UBV4 365 aa13.02□□□□□ -0.33
CDC42-202ENST00000344548 PCOLCE2Q9UKZ9 415 aa13.02□□□□□ -0.33
CDC42-202ENST00000344548 PRSS51A0A1B0GVH4 220 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 A0A1W2PPC4 97 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 GNG14A0A1W2PPG7 69 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 TCRBV3S1A0A5B6 114 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 BTN3A3O00478 584 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 PLPP1O14494 284 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 ARPC2O15144 300 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 KLK1P06870 262 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 THEGLP0DJG4 465 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 HRH2P25021 359 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 PEX2P28328 305 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 MAPK1P28482 360 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 HSD17B2P37059 387 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 SNRPNP63162 240 aaKnown RBP13.01□□□□□ -0.33
CDC42-202ENST00000344548 RHDQ02161 417 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 TRAP1Q12931 704 aaKnown RBP13.01□□□□□ -0.33
CDC42-202ENST00000344548 MUM1Q2TAK8 710 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 GALNT18Q6P9A2 607 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 DHFR2Q86XF0 187 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 CLEC4FQ8N1N0 589 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 SYNPOQ8N3V7 929 aa13.01□□□□□ -0.33
CDC42-202ENST00000344548 CANT1Q8WVQ1 401 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms