RNA–Protein interactions for RNA: ENST00000343524.9

ATG4A-201, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 2

Gene ATG4A, Length 1,941 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-201ENST00000343524 ERAP1Q9NZ08 941 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 MPP6Q9NZW5 540 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 PDP1Q9P0J1 537 aaPredicted RBP7.88□□□□□ -1.15
ATG4A-201ENST00000343524 MBD2Q9UBB5 411 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 GIMAP2Q9UG22 337 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 FBXO10Q9UK96 956 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 MGAT4AQ9UM21 535 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 COPS3Q9UNS2 423 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 LIPT1Q9Y234 373 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 CACNG2Q9Y698 323 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 AP1M2Q9Y6Q5 423 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 PIEZO1Q92508 2521 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 A0A1B0GW55 424 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 DDTLA6NHG4 134 aaPredicted RBP7.88□□□□□ -1.15
ATG4A-201ENST00000343524 F8W036 122 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 BTN3A1O00481 513 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 GNB5O14775 395 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 SLC7A4O43246 635 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 LYRM1O43325 122 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 USP2O75604 605 aaPredicted RBP7.88□□□□□ -1.15
ATG4A-201ENST00000343524 RHOBTB1O94844 696 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 WISP3O95389 354 aaPredicted RBP7.88□□□□□ -1.15
ATG4A-201ENST00000343524 PRAMEF1O95521 474 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 GNRH1P01148 92 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 C9P02748 559 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 CSF2P04141 144 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 PFKMP08237 780 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 DUX4L2P0CJ85 424 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 DUX4L3P0CJ86 424 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 DUX4L4P0CJ87 422 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 DUX4L5P0CJ88 424 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 DUX4L6P0CJ89 424 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 DUX4L7P0CJ90 424 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 HSMCR30P0CW71 290 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 SLC2A2P11168 524 aaPredicted RBP7.88□□□□□ -1.15
ATG4A-201ENST00000343524 CKMT1AP12532 417 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 CCL5P13501 91 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 TPH1P17752 444 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 ITGB6P18564 788 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 TSPAN8P19075 237 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 HK1P19367 917 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 STOMP27105 288 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 HOXA9P31269 272 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 SDC2P34741 201 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 MATKP42679 507 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 CLCNKAP51800 687 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 KCTD2Q14681 263 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 GRIK4Q16099 956 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 PFKFB4Q16877 469 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 PAN2Q504Q3 1202 aaKnown RBP7.88□□□□□ -1.15
ATG4A-201ENST00000343524 RTL4Q6ZR62 310 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 ISCA2Q86U28 154 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 FAM83AQ86UY5 434 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 CDH26Q8IXH8 852 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 NLGN4YQ8NFZ3 816 aaPredicted RBP7.88□□□□□ -1.15
ATG4A-201ENST00000343524 OR4F6Q8NGB9 312 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 OR10A6Q8NH74 314 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 WDR48Q8TAF3 677 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 GPR152Q8TDT2 470 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 GGHQ92820 318 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 HGDQ93099 445 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 MYLPFQ96A32 169 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 TMEM143Q96AN5 459 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 FAM120BQ96EK7 910 aaKnown RBP7.88□□□□□ -1.15
ATG4A-201ENST00000343524 DIRAS2Q96HU8 199 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 MSLNLQ96KJ4 702 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 TEX37Q96LM6 180 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 C12orf42Q96LP6 360 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 TSGA13Q96PP4 275 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 EPYCQ99645 322 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 WACQ9BTA9 647 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 TAPBPLQ9BX59 468 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 C1QTNF3Q9BXJ4 246 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 SIK2Q9H0K1 926 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 RC3H2Q9HBD1 1191 aaKnown RBP7.88□□□□□ -1.15
ATG4A-201ENST00000343524 MCCC2Q9HCC0 563 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 PXMP2Q9NR77 195 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 TMLHEQ9NVH6 421 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 TRPM5Q9NZQ8 1165 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 SLAMF8Q9P0V8 285 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 DUX4Q9UBX2 424 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 AGO1Q9UL18 857 aaKnown RBP7.88□□□□□ -1.15
ATG4A-201ENST00000343524 SSR3Q9UNL2 185 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 PTGDR2Q9Y5Y4 395 aa7.88□□□□□ -1.15
ATG4A-201ENST00000343524 PARP14Q460N5 1801 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 A0A1W2PPL8 197 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 CIB4A0PJX0 185 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 MYO1GB0I1T2 1018 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 INMT-MINDY4F8WBC2 141 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 SGK494L7N484 410 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 PPP6CO00743 305 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 INPPL1O15357 1258 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 ST8SIA5O15466 376 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 CACNG3O60359 315 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 MSCO60682 206 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 KERAO60938 352 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 DHFRP00374 187 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 LALBAP00709 142 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 PTHP01270 115 aa7.87□□□□□ -1.15
ATG4A-201ENST00000343524 IL6P05231 212 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms