RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 FAM129CQ86XR2 697 aa17.93■□□□□ 0.46
CDHR4-201ENST00000343366 ZNF655Q8N720 491 aaPredicted RBP17.93■□□□□ 0.46
CDHR4-201ENST00000343366 ARMC2Q8NEN0 867 aa17.93■□□□□ 0.46
CDHR4-201ENST00000343366 TTLQ8NG68 377 aa17.93■□□□□ 0.46
CDHR4-201ENST00000343366 UBE2E3Q969T4 207 aa17.93■□□□□ 0.46
CDHR4-201ENST00000343366 PTCD3Q96EY7 689 aaKnown RBP17.93■□□□□ 0.46
CDHR4-201ENST00000343366 FAM111AQ96PZ2 611 aa17.93■□□□□ 0.46
CDHR4-201ENST00000343366 TAAR9Q96RI9 348 aa17.93■□□□□ 0.46
CDHR4-201ENST00000343366 ZFYVE21Q9BQ24 234 aa17.93■□□□□ 0.46
CDHR4-201ENST00000343366 EFCAB11Q9BUY7 163 aa17.93■□□□□ 0.46
CDHR4-201ENST00000343366 DDA1Q9BW61 102 aa17.93■□□□□ 0.46
CDHR4-201ENST00000343366 SLC6A20Q9NP91 592 aa17.93■□□□□ 0.46
CDHR4-201ENST00000343366 ENAMQ9NRM1 1142 aa17.93■□□□□ 0.46
CDHR4-201ENST00000343366 RARRES3Q9UL19 164 aa17.93■□□□□ 0.46
CDHR4-201ENST00000343366 NBPF19A0A087WUL8 3843 aa17.93■□□□□ 0.46
CDHR4-201ENST00000343366 KCNE1BA0A087WTH5 132 aa17.92■□□□□ 0.46
CDHR4-201ENST00000343366 H7BY64 318 aa17.92■□□□□ 0.46
CDHR4-201ENST00000343366 POLR1CO15160 346 aaPredicted RBP17.92■□□□□ 0.46
CDHR4-201ENST00000343366 BIRC5O15392 142 aa17.92■□□□□ 0.46
CDHR4-201ENST00000343366 TRIM13O60858 407 aa17.92■□□□□ 0.46
CDHR4-201ENST00000343366 CDH1P12830 882 aa17.92■□□□□ 0.46
CDHR4-201ENST00000343366 PVRP15151 417 aa17.92■□□□□ 0.46
CDHR4-201ENST00000343366 AGTR2P50052 363 aa17.92■□□□□ 0.46
CDHR4-201ENST00000343366 TUBB3Q13509 450 aa17.92■□□□□ 0.46
CDHR4-201ENST00000343366 E2F2Q14209 437 aa17.92■□□□□ 0.46
CDHR4-201ENST00000343366 HSP90B2PQ58FF3 399 aa17.92■□□□□ 0.46
CDHR4-201ENST00000343366 COLEC12Q5KU26 742 aa17.92■□□□□ 0.46
CDHR4-201ENST00000343366 ZNF678Q5SXM1 525 aa17.92■□□□□ 0.46
CDHR4-201ENST00000343366 DCAF12Q5T6F0 453 aa17.92■□□□□ 0.46
CDHR4-201ENST00000343366 LIPJQ5W064 366 aa17.92■□□□□ 0.46
CDHR4-201ENST00000343366 FCRL6Q6DN72 434 aa17.92■□□□□ 0.46
CDHR4-201ENST00000343366 GPR135Q8IZ08 494 aa17.92■□□□□ 0.46
CDHR4-201ENST00000343366 DNAJC22Q8N4W6 341 aa17.92■□□□□ 0.46
CDHR4-201ENST00000343366 TEX9Q8N6V9 391 aa17.92■□□□□ 0.46
CDHR4-201ENST00000343366 WDR34Q96EX3 536 aa17.92■□□□□ 0.46
CDHR4-201ENST00000343366 PPM1MQ96MI6 270 aa17.92■□□□□ 0.46
CDHR4-201ENST00000343366 PRAP1Q96NZ9 151 aa17.92■□□□□ 0.46
CDHR4-201ENST00000343366 NTMT1Q9BV86 223 aa17.92■□□□□ 0.46
CDHR4-201ENST00000343366 NT5DC2Q9H857 520 aa17.92■□□□□ 0.46
CDHR4-201ENST00000343366 FGF21Q9NSA1 209 aa17.92■□□□□ 0.46
CDHR4-201ENST00000343366 SIDT1Q9NXL6 827 aaKnown RBP17.92■□□□□ 0.46
CDHR4-201ENST00000343366 NKIRAS1Q9NYS0 192 aa17.92■□□□□ 0.46
CDHR4-201ENST00000343366 IGKV1-8A0A0C4DH67 115 aa17.91■□□□□ 0.46
CDHR4-201ENST00000343366 TRBC2A0A5B9 178 aa17.91■□□□□ 0.46
CDHR4-201ENST00000343366 OTCP00480 354 aa17.91■□□□□ 0.46
CDHR4-201ENST00000343366 CD82P27701 267 aa17.91■□□□□ 0.46
CDHR4-201ENST00000343366 RBMS1P29558 406 aaKnown RBP17.91■□□□□ 0.46
CDHR4-201ENST00000343366 HPDP32754 393 aaPredicted RBP17.91■□□□□ 0.46
CDHR4-201ENST00000343366 HNF4AP41235 474 aa17.91■□□□□ 0.46
CDHR4-201ENST00000343366 CSNK1G2P78368 415 aa17.91■□□□□ 0.46
CDHR4-201ENST00000343366 IRF8Q02556 426 aa17.91■□□□□ 0.46
CDHR4-201ENST00000343366 FOXM1Q08050 763 aa17.91■□□□□ 0.46
CDHR4-201ENST00000343366 C18orf21Q32NC0 220 aaPredicted RBP17.91■□□□□ 0.46
CDHR4-201ENST00000343366 LARP7Q4G0J3 582 aaKnown RBP eCLIP17.91■□□□□ 0.46
CDHR4-201ENST00000343366 CFAP157Q5JU67 520 aa17.91■□□□□ 0.46
CDHR4-201ENST00000343366 MANEAQ5SRI9 462 aa17.91■□□□□ 0.46
CDHR4-201ENST00000343366 C10orf62Q5T681 223 aaPredicted RBP17.91■□□□□ 0.46
CDHR4-201ENST00000343366 YOD1Q5VVQ6 348 aaPredicted RBP17.91■□□□□ 0.46
CDHR4-201ENST00000343366 TLDC1Q6P9B6 456 aa17.91■□□□□ 0.46
CDHR4-201ENST00000343366 CCDC81Q6ZN84 652 aa17.91■□□□□ 0.46
CDHR4-201ENST00000343366 PRICKLE2Q7Z3G6 844 aa17.91■□□□□ 0.46
CDHR4-201ENST00000343366 TMPRSS11BQ86T26 416 aa17.91■□□□□ 0.46
CDHR4-201ENST00000343366 PPP1R3BQ86XI6 285 aa17.91■□□□□ 0.46
CDHR4-201ENST00000343366 BMPERQ8N8U9 685 aa17.91■□□□□ 0.46
CDHR4-201ENST00000343366 ATP6V1E2Q96A05 226 aa17.91■□□□□ 0.46
CDHR4-201ENST00000343366 RERGQ96A58 199 aaPredicted RBP17.91■□□□□ 0.46
CDHR4-201ENST00000343366 ESAMQ96AP7 390 aa17.91■□□□□ 0.46
CDHR4-201ENST00000343366 TRMOQ9BU70 441 aa17.91■□□□□ 0.46
CDHR4-201ENST00000343366 NLNQ9BYT8 704 aa17.91■□□□□ 0.46
CDHR4-201ENST00000343366 DRC3Q9H069 523 aa17.91■□□□□ 0.46
CDHR4-201ENST00000343366 IPPKQ9H8X2 491 aa17.91■□□□□ 0.46
CDHR4-201ENST00000343366 MED4Q9NPJ6 270 aa17.91■□□□□ 0.46
CDHR4-201ENST00000343366 CUEDC1Q9NWM3 386 aaPredicted RBP17.91■□□□□ 0.46
CDHR4-201ENST00000343366 SLC39A1Q9NY26 324 aa17.91■□□□□ 0.46
CDHR4-201ENST00000343366 ADGRE2Q9UHX3 823 aa17.91■□□□□ 0.46
CDHR4-201ENST00000343366 PILRAQ9UKJ1 303 aa17.91■□□□□ 0.46
CDHR4-201ENST00000343366 PCTPQ9UKL6 214 aa17.91■□□□□ 0.46
CDHR4-201ENST00000343366 PCDHGA3Q9Y5H0 932 aa17.91■□□□□ 0.46
CDHR4-201ENST00000343366 AP1M2Q9Y6Q5 423 aa17.91■□□□□ 0.46
CDHR4-201ENST00000343366 USP9YO00507 2555 aaPredicted RBP17.9■□□□□ 0.46
CDHR4-201ENST00000343366 SASH3O75995 380 aa17.9■□□□□ 0.46
CDHR4-201ENST00000343366 SUPT7LO94864 414 aa17.9■□□□□ 0.46
CDHR4-201ENST00000343366 SNUPNO95149 360 aaKnown RBP17.9■□□□□ 0.46
CDHR4-201ENST00000343366 SIX3O95343 332 aaPredicted RBP17.9■□□□□ 0.46
CDHR4-201ENST00000343366 HBQ1P09105 142 aa17.9■□□□□ 0.46
CDHR4-201ENST00000343366 EBLN1P0CF75 366 aa17.9■□□□□ 0.46
CDHR4-201ENST00000343366 FGF3P11487 239 aaPredicted RBP17.9■□□□□ 0.46
CDHR4-201ENST00000343366 FGF5P12034 268 aa17.9■□□□□ 0.46
CDHR4-201ENST00000343366 FOLR1P15328 257 aa17.9■□□□□ 0.46
CDHR4-201ENST00000343366 CREB1P16220 341 aa17.9■□□□□ 0.46
CDHR4-201ENST00000343366 SERPINB1P30740 379 aa17.9■□□□□ 0.46
CDHR4-201ENST00000343366 AHRP35869 848 aa17.9■□□□□ 0.46
CDHR4-201ENST00000343366 SERPINB5P36952 375 aa17.9■□□□□ 0.46
CDHR4-201ENST00000343366 ETV4P43268 484 aa17.9■□□□□ 0.46
CDHR4-201ENST00000343366 CCNG1P51959 295 aa17.9■□□□□ 0.46
CDHR4-201ENST00000343366 ITGA1P56199 1179 aa17.9■□□□□ 0.46
CDHR4-201ENST00000343366 NFATC3Q12968 1075 aa17.9■□□□□ 0.46
CDHR4-201ENST00000343366 ZIC1Q15915 447 aa17.9■□□□□ 0.46
CDHR4-201ENST00000343366 XKR6Q5GH73 641 aa17.9■□□□□ 0.46
CDHR4-201ENST00000343366 SLCO4C1Q6ZQN7 724 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms