RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 PIGXQ8TBF5 258 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 KCNS3Q9BQ31 491 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 CLEC4MQ9H2X3 399 aaPredicted RBP6.97□□□□□ -1.29
VCAN-202ENST00000342785 HCN4Q9Y3Q4 1203 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 SPIN1Q9Y657 262 aaPredicted RBP6.97□□□□□ -1.29
VCAN-202ENST00000342785 TFPTP0C1Z6 253 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 PRKAR1AP10644 381 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 GGT1P19440 569 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 OR1E2P47887 323 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 KCNC1P48547 511 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 ZNF763Q0D2J5 394 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 SLC9A5Q14940 896 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 XKR4Q5GH76 650 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 USP43Q70EL4 1123 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 GET4Q7L5D6 327 aaPredicted RBP6.97□□□□□ -1.29
VCAN-202ENST00000342785 IZUMO1Q8IYV9 350 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 MDGA1Q8NFP4 955 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 RAB8BQ92930 207 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 YIPF4Q9BSR8 244 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 CALML5Q9NZT1 146 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 GPR45Q9Y5Y3 372 aa6.97□□□□□ -1.29
VCAN-202ENST00000342785 LEFTY1O75610 366 aa6.96□□□□□ -1.29
VCAN-202ENST00000342785 OR6A2O95222 327 aa6.96□□□□□ -1.29
VCAN-202ENST00000342785 HPRP00739 348 aa6.96□□□□□ -1.29
VCAN-202ENST00000342785 BCHEP06276 602 aa6.96□□□□□ -1.29
VCAN-202ENST00000342785 ALDOCP09972 364 aaKnown RBP6.96□□□□□ -1.29
VCAN-202ENST00000342785 ATP12AP54707 1039 aa6.96□□□□□ -1.29
VCAN-202ENST00000342785 VBP1P61758 197 aa6.96□□□□□ -1.29
VCAN-202ENST00000342785 KLHL35Q6PF15 583 aa6.96□□□□□ -1.29
VCAN-202ENST00000342785 SH2D5Q6ZV89 423 aa6.96□□□□□ -1.29
VCAN-202ENST00000342785 CENPSQ8N2Z9 138 aa6.96□□□□□ -1.29
VCAN-202ENST00000342785 DNASE1L2Q92874 299 aa6.96□□□□□ -1.29
VCAN-202ENST00000342785 IRF7Q92985 503 aa6.96□□□□□ -1.29
VCAN-202ENST00000342785 SCRN2Q96FV2 425 aa6.96□□□□□ -1.29
VCAN-202ENST00000342785 DPH2Q9BQC3 489 aaPredicted RBP6.96□□□□□ -1.29
VCAN-202ENST00000342785 TBC1D17Q9HA65 648 aa6.96□□□□□ -1.29
VCAN-202ENST00000342785 FAM118AQ9NWS6 357 aa6.96□□□□□ -1.29
VCAN-202ENST00000342785 ERVK-18Q9QC07 812 aa6.96□□□□□ -1.29
VCAN-202ENST00000342785 SLC35G6P0C7Q6 338 aa6.96□□□□□ -1.29
VCAN-202ENST00000342785 ATXN1LP0C7T5 689 aaKnown RBP6.96□□□□□ -1.29
VCAN-202ENST00000342785 RPP38P78345 283 aaKnown RBP6.96□□□□□ -1.29
VCAN-202ENST00000342785 GK3PQ14409 553 aa6.96□□□□□ -1.29
VCAN-202ENST00000342785 C5orf22Q49AR2 442 aa6.96□□□□□ -1.29
VCAN-202ENST00000342785 TPRG1LQ5T0D9 272 aa6.96□□□□□ -1.29
VCAN-202ENST00000342785 CNKSR3Q6P9H4 555 aa6.96□□□□□ -1.29
VCAN-202ENST00000342785 VITQ6UXI7 678 aa6.96□□□□□ -1.29
VCAN-202ENST00000342785 GJD3Q8N144 294 aa6.96□□□□□ -1.29
VCAN-202ENST00000342785 ISL2Q96A47 359 aa6.96□□□□□ -1.29
VCAN-202ENST00000342785 SLC30A3Q99726 388 aa6.96□□□□□ -1.29
VCAN-202ENST00000342785 MAPKAP1Q9BPZ7 522 aa6.96□□□□□ -1.29
VCAN-202ENST00000342785 TMEM27Q9HBJ8 222 aa6.96□□□□□ -1.29
VCAN-202ENST00000342785 RPRD1BQ9NQG5 326 aaKnown RBP6.96□□□□□ -1.29
VCAN-202ENST00000342785 NKIRAS2Q9NYR9 191 aa6.96□□□□□ -1.29
VCAN-202ENST00000342785 TLR4O00206 839 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 ACOX3O15254 700 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 ERI3O43414 337 aaKnown RBP6.96□□□□□ -1.3
VCAN-202ENST00000342785 GNAO1P09471 354 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 IGFBP6P24592 240 aaPredicted RBP6.96□□□□□ -1.3
VCAN-202ENST00000342785 RPL10P27635 214 aaKnown RBP6.96□□□□□ -1.3
VCAN-202ENST00000342785 CMPK1P30085 196 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 CSTF2P33240 577 aaKnown RBP eCLIP6.96□□□□□ -1.3
VCAN-202ENST00000342785 DCTP40126 519 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 XKP51811 444 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 PCDH1Q08174 1060 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 ZFP69Q49AA0 526 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 UBE2J2Q8N2K1 259 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 SLC5A11Q8WWX8 675 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 FCRL4Q96PJ5 515 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 ALPK1Q96QP1 1244 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 C1QTNF1Q9BXJ1 281 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 GMPR2Q9P2T1 348 aaKnown RBP6.96□□□□□ -1.3
VCAN-202ENST00000342785 RNF6Q9Y252 685 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 C7orf72A4D263 438 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 TEX28O15482 410 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 SMAD6O43541 496 aaKnown RBP6.96□□□□□ -1.3
VCAN-202ENST00000342785 OR5F1O95221 314 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 VIPP01282 170 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 JUPP14923 745 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 FUT4P22083 530 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 RPS3AP61247 264 aaKnown RBP6.96□□□□□ -1.3
VCAN-202ENST00000342785 ADAM17P78536 824 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 ILF3Q12906 894 aaKnown RBP eCLIP6.96□□□□□ -1.3
VCAN-202ENST00000342785 FBXO43Q4G163 708 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 LRRC17Q8N6Y2 441 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 ZCCHC10Q8TBK6 192 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 GLYATL1Q969I3 302 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 TUBA1CQ9BQE3 449 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 C11orf84Q9BUA3 381 aaPredicted RBP6.96□□□□□ -1.3
VCAN-202ENST00000342785 TAS2R9Q9NYW1 312 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 RHCGQ9UBD6 479 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 ZNF221Q9UK13 617 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 MAN2B2Q9Y2E5 1009 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 GLI3P10071 1580 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 NT5EP21589 574 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 GTF2E2P29084 291 aaKnown RBP6.96□□□□□ -1.3
VCAN-202ENST00000342785 GUCA1AP43080 201 aaPredicted RBP6.96□□□□□ -1.3
VCAN-202ENST00000342785 CCR8P51685 355 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 ZNF140P52738 457 aaPredicted RBP6.96□□□□□ -1.3
VCAN-202ENST00000342785 KCNC4Q03721 635 aa6.96□□□□□ -1.3
VCAN-202ENST00000342785 PMS2P3Q13401 168 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms