RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 FIP1L1Q6UN15 594 aaKnown RBP14.57□□□□□ -0.08
UBE3B-202ENST00000342494 ZNF627Q7L945 461 aa14.57□□□□□ -0.08
UBE3B-202ENST00000342494 SYNGR4O95473 234 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 GBAP04062 536 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 EIF1AXP47813 144 aaKnown RBP14.56□□□□□ -0.08
UBE3B-202ENST00000342494 CDK6Q00534 326 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 ZC3HC1Q86WB0 502 aaKnown RBP14.56□□□□□ -0.08
UBE3B-202ENST00000342494 CLIP4Q8N3C7 705 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 DGCR14Q96DF8 476 aaKnown RBP14.56□□□□□ -0.08
UBE3B-202ENST00000342494 POLR2J2Q9GZM3 115 aaKnown RBP14.56□□□□□ -0.08
UBE3B-202ENST00000342494 BMP8BP34820 402 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 EEFSECP57772 596 aaKnown RBP14.56□□□□□ -0.08
UBE3B-202ENST00000342494 OR12D2P58182 307 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 ZNF33AQ06730 810 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 LMAN2Q12907 356 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 BNIP1Q12981 228 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 C1orf61Q13536 156 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 ADGRE1Q14246 886 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 RBM20Q5T481 1227 aaKnown RBP14.56□□□□□ -0.08
UBE3B-202ENST00000342494 BMP8AQ7Z5Y6 402 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 TICAM1Q8IUC6 712 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 DERL2Q9GZP9 239 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 OR5K4A6NMS3 321 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 TP53I11O14683 189 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 DUX1O43812 170 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 PGLSO95336 258 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 MTHFD1P11586 935 aaKnown RBP14.56□□□□□ -0.08
UBE3B-202ENST00000342494 FOSL2P15408 326 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 ETV3P41162 512 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 PXYLP1Q8TE99 480 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 TOP1MTQ969P6 601 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 LRIG1Q96JA1 1093 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 ZFP3Q96NJ6 502 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 PRTFDC1Q9NRG1 225 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 ZIM2Q9NZV7 527 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 SIX4Q9UIU6 781 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 SLC39A5Q6ZMH5 540 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 ZNF783Q6ZMS7 281 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 HTRA1Q92743 480 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 CGREF1Q99674 301 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 C17orf62Q9BQA9 187 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 RBCK1Q9BYM8 510 aa14.56□□□□□ -0.08
UBE3B-202ENST00000342494 TRIM64A6NGJ6 449 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 GRXCR1A8MXD5 290 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 NR4A1P22736 598 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 DGKQP52824 942 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 MTTPP55157 894 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 ST3GAL3Q11203 375 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 TMEM198Q66K66 360 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 SDR16C5Q8N3Y7 309 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 EZH1Q92800 747 aaPredicted RBP14.55□□□□□ -0.08
UBE3B-202ENST00000342494 XKR8Q9H6D3 395 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 A0A1W2PQU0 124 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 RPP14O95059 124 aaKnown RBP14.55□□□□□ -0.08
UBE3B-202ENST00000342494 EBLN1P0CF75 366 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 JUNDP17535 347 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 STK19P49842 368 aaPredicted RBP14.55□□□□□ -0.08
UBE3B-202ENST00000342494 SCN1BQ07699 218 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 NFKBIDQ8NI38 313 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 BORCS5Q969J3 196 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 SH3YL1Q96HL8 342 aaPredicted RBP14.55□□□□□ -0.08
UBE3B-202ENST00000342494 C16orf70Q9BSU1 422 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 NSUN3Q9H649 340 aaKnown RBP14.55□□□□□ -0.08
UBE3B-202ENST00000342494 C14orf105Q9NVL8 296 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 NLE1Q9NVX2 485 aaPredicted RBP14.55□□□□□ -0.08
UBE3B-202ENST00000342494 FAM170BA6NMN3 283 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 H7BY64 318 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 GSTT2BP0CG30 244 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 SLC25A11Q02978 314 aaKnown RBP14.55□□□□□ -0.08
UBE3B-202ENST00000342494 TNFAIP8L3Q5GJ75 292 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 SLC9A4Q6AI14 798 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 TMPRSS9Q7Z410 1059 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 ZNF101Q8IZC7 436 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 YIPF7Q8N8F6 280 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 PTCHD1Q96NR3 888 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 PRAP1Q96NZ9 151 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 CMKLR1Q99788 373 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 BLOC1S5-TXNDC5H3BN57 136 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 PLEKHS1Q5SXH7 462 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 C1orf94Q6P1W5 598 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 C14orf80Q86SX3 495 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 CCDC36Q8IYA8 594 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 C1orf74Q96LT6 269 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 EBF4Q9BQW3 602 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 A0A1W2PRQ8 180 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 LCHNA4D1U4 455 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 E7ENX8 843 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 AGPSO00116 658 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 INMTO95050 263 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 MATN1P21941 496 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 EDNRAP25101 427 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 RBMS1P29558 406 aaKnown RBP14.55□□□□□ -0.08
UBE3B-202ENST00000342494 KCNC3Q14003 757 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 NOXRED1Q6NXP6 359 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 DPY19L3Q6ZPD9 716 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 DGLUCYQ7Z3D6 616 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 SCAMP4Q969E2 229 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 C8orf33Q9H7E9 229 aaPredicted RBP14.55□□□□□ -0.08
UBE3B-202ENST00000342494 TELO2Q9Y4R8 837 aa14.55□□□□□ -0.08
UBE3B-202ENST00000342494 PHLPP1O60346 1717 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms