RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 ANXA8P13928 327 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 HRH2P25021 359 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 MLLT10P55197 1068 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 NEK5Q6P3R8 708 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 SERINC5Q86VE9 423 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 THOC6Q86W42 341 aaKnown RBP12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 RNF130Q86XS8 419 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 APCDD1Q8J025 514 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 KRT78Q8N1N4 520 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 TCAIMQ8N3R3 496 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 IPCEF1Q8WWN9 437 aaPredicted RBP12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 OR2AG1Q9H205 316 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 CSNK1G1Q9HCP0 422 aa12.04□□□□□ -0.48
SNRNP48-201ENST00000342415 LOC285095A0A1B0GVY8 99 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 HHLA1C9JL84 531 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 SERPINB7O75635 380 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 CDRT1O95170 752 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 TGFBR1P36897 503 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 ACLYP53396 1101 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 ASB18Q6ZVZ8 466 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 RBM23Q86U06 439 aaKnown RBP12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 TBC1D19Q8N5T2 526 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 OR2AP1Q8NGE2 309 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 SLC38A4Q969I6 547 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 TTYH2Q9BSA4 534 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 OR51E2Q9H255 320 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 IL26Q9NPH9 171 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 UCKL1Q9NWZ5 548 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 HSFX1Q9UBD0 423 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 B4GALT6Q9UBX8 382 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 SHANK3Q9BYB0 1731 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 OR6C70A6NIJ9 312 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 E2F3O00716 465 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 STC2O76061 302 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 OXSR1O95747 527 aaPredicted RBP12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 C7P10643 843 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 TAS2R41P59536 307 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 CREMQ03060 361 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 TEAD4Q15561 434 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 C16orf62Q7Z3J2 963 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 TICAM1Q8IUC6 712 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 TEX47Q8TBZ9 253 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 ING5Q8WYH8 240 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 TRIM63Q969Q1 353 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 ZNF607Q96SK3 696 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 OSBPL10Q9BXB5 764 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 ASAH2Q9NR71 780 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 INTS6Q9UL03 887 aaKnown RBP12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 PLAGL1Q9UM63 463 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 ENTPD4Q9Y227 616 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 AHDC1Q5TGY3 1603 aaPredicted RBP12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 GLOD5A6NK44 160 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 C8GP07360 202 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 INHBEP58166 350 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 GRIK2Q13002 908 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 KIAA1161Q6NSJ0 714 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 MZT2BQ6NZ67 158 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 PLEKHG7Q6ZR37 379 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 OTOP2Q7RTS6 562 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 CDH24Q86UP0 819 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 SLC5A8Q8N695 610 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 OR9Q2Q8NGE9 314 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 RTP3Q9BQQ7 232 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 FNIP2Q9P278 1114 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 GULP1Q9UBP9 304 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 YIPF1Q9Y548 306 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 PRSS21Q9Y6M0 314 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 STRCQ7RTU9 1775 aa12.03□□□□□ -0.48
SNRNP48-201ENST00000342415 DCKP27707 260 aa12.02□□□□□ -0.48
SNRNP48-201ENST00000342415 HMGCLP35914 325 aa12.02□□□□□ -0.48
SNRNP48-201ENST00000342415 ITGA1P56199 1179 aa12.02□□□□□ -0.48
SNRNP48-201ENST00000342415 GPR33Q49SQ1 333 aa12.02□□□□□ -0.48
SNRNP48-201ENST00000342415 MPPE1Q53F39 396 aa12.02□□□□□ -0.48
SNRNP48-201ENST00000342415 UBE2UQ5VVX9 321 aa12.02□□□□□ -0.48
SNRNP48-201ENST00000342415 LIPKQ5VXJ0 399 aa12.02□□□□□ -0.48
SNRNP48-201ENST00000342415 ATG9BQ674R7 924 aa12.02□□□□□ -0.48
SNRNP48-201ENST00000342415 SYCE2Q6PIF2 218 aa12.02□□□□□ -0.48
SNRNP48-201ENST00000342415 SERPINA13PQ6UXR4 307 aa12.02□□□□□ -0.48
SNRNP48-201ENST00000342415 CEACAM20Q6UY09 585 aa12.02□□□□□ -0.48
SNRNP48-201ENST00000342415 NEK10Q6ZWH5 1172 aa12.02□□□□□ -0.48
SNRNP48-201ENST00000342415 C17orf64Q86WR6 236 aa12.02□□□□□ -0.48
SNRNP48-201ENST00000342415 NPAS3Q8IXF0 933 aa12.02□□□□□ -0.48
SNRNP48-201ENST00000342415 DPP10Q8N608 796 aa12.02□□□□□ -0.48
SNRNP48-201ENST00000342415 MGLLQ99685 303 aa12.02□□□□□ -0.48
SNRNP48-201ENST00000342415 HTATIP2Q9BUP3 242 aa12.02□□□□□ -0.48
SNRNP48-201ENST00000342415 POU2F3Q9UKI9 436 aa12.02□□□□□ -0.48
SNRNP48-201ENST00000342415 CFL2Q9Y281 166 aa12.02□□□□□ -0.48
SNRNP48-201ENST00000342415 NRAPQ86VF7 1730 aa12.02□□□□□ -0.48
SNRNP48-201ENST00000342415 TLL1O43897 1013 aa12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 KIAA0513O60268 411 aa12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 NUDT7P0C024 238 aa12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 BPIP17213 487 aa12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 TCEA1P23193 301 aaKnown RBP12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 CD97P48960 835 aa12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 ARSIQ5FYB1 569 aa12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 COQ5Q5HYK3 327 aa12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 Q6ZNX1 250 aa12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 TMCO2Q7Z6W1 182 aaPredicted RBP12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 FCRL4Q96PJ5 515 aa12.02□□□□□ -0.49
SNRNP48-201ENST00000342415 FAM129BQ96TA1 746 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms