RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 PTPRAP18433 802 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 BMP8BP34820 402 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 CLCNKAP51800 687 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 ABRQ12979 859 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 FAM174BQ3ZCQ3 159 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 LRIF1Q5T3J3 769 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 MRNIPQ6NTE8 343 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 BMP8AQ7Z5Y6 402 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 OR9Q1Q8NGQ5 310 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 KCNH6Q9H252 994 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 KIF25Q9UIL4 384 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 SCML1Q9UN30 329 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 SSR3Q9UNL2 185 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 CRYL1Q9Y2S2 319 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 NME7Q9Y5B8 376 aa17.94■□□□□ 0.46
SMPD1-201ENST00000342245 ESR1P03372 595 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 GABRB1P18505 474 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 EVI2BP34910 448 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 CRISP3P54108 245 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 GPR85P60893 370 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 HSF2Q03933 536 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 TP53BP2Q13625 1128 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 DMC1Q14565 340 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 IL27RAQ6UWB1 636 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 TFAP2EQ6VUC0 442 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 LIPIQ6XZB0 460 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 METTL3Q86U44 580 aaKnown RBP17.93■□□□□ 0.46
SMPD1-201ENST00000342245 SPNS2Q8IVW8 549 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 LRRC52Q8N7C0 313 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 OR4F6Q8NGB9 312 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 KCTD13Q8WZ19 329 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 ULK4Q96C45 1275 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 OR5M11Q96RB7 305 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 SHARPINQ9H0F6 387 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 MIXL1Q9H2W2 232 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 ANKRA2Q9H9E1 313 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 HRH3Q9Y5N1 445 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 A0A1W2PQL4 384 aaPredicted RBP17.93■□□□□ 0.46
SMPD1-201ENST00000342245 HYKKA2RU49 373 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 INMT-MINDY4F8WBC2 141 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 HRO43593 1189 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 PIPP12273 146 aaPredicted RBP17.93■□□□□ 0.46
SMPD1-201ENST00000342245 HK1P19367 917 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 LHCGRP22888 699 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 MAP2K6P52564 334 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 ABATP80404 500 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 TIAL1Q01085 375 aaKnown RBP eCLIP17.93■□□□□ 0.46
SMPD1-201ENST00000342245 TSNQ15631 228 aaKnown RBP17.93■□□□□ 0.46
SMPD1-201ENST00000342245 PTCHD3Q3KNS1 767 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 CFAP77Q6ZQR2 320 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 PHACTR4Q8IZ21 702 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 KIF12Q96FN5 646 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 KCNC2Q96PR1 638 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 ADAM30Q9UKF2 790 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 DERAQ9Y315 318 aa17.93■□□□□ 0.46
SMPD1-201ENST00000342245 MROH6A6NGR9 719 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 KRBOX1C9JBD0 128 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 ACSL4O60488 711 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 GLP2RO95838 553 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 OAZ1P54368 228 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 WNT3AP56704 352 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 FLI1Q01543 452 aaPredicted RBP17.92■□□□□ 0.46
SMPD1-201ENST00000342245 LUZP2Q86TE4 346 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 CARNMT1Q8N4J0 409 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 LRRC71Q8N4P6 559 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 B3GNT7Q8NFL0 401 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 METTL6Q8TCB7 284 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 CELF6Q96J87 481 aaKnown RBP17.92■□□□□ 0.46
SMPD1-201ENST00000342245 AARSD1Q9BTE6 412 aaKnown RBP17.92■□□□□ 0.46
SMPD1-201ENST00000342245 ZNF416Q9BWM5 594 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 ARHGAP39Q9C0H5 1083 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 LDAHQ9H6V9 325 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 ATP13A1Q9HD20 1204 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 POLMQ9NP87 494 aaPredicted RBP17.92■□□□□ 0.46
SMPD1-201ENST00000342245 PCDHB16Q9NRJ7 776 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 RAD18Q9NS91 495 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 IMPAD1Q9NX62 359 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 OR12D3Q9UGF7 316 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 POFUT2Q9Y2G5 429 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 GJA3Q9Y6H8 435 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 ARVCFO00192 962 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 GFRA2O00451 464 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 HLA-EP13747 358 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 ERVK-21P61565 698 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 EXOSC2Q13868 293 aaKnown RBP17.92■□□□□ 0.46
SMPD1-201ENST00000342245 ZMYND11Q15326 602 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 PLAG1Q6DJT9 500 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 OR52E6Q96RD3 313 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 CLMPQ9H6B4 373 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 MS4A12Q9NXJ0 267 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 RDH8Q9NYR8 311 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 ZNF226Q9NYT6 803 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 GALPQ9UBC7 116 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 MAB21L2Q9Y586 359 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 ACTL7AQ9Y615 435 aa17.92■□□□□ 0.46
SMPD1-201ENST00000342245 PCDH17O14917 1159 aa17.91■□□□□ 0.46
SMPD1-201ENST00000342245 ADAM11O75078 769 aa17.91■□□□□ 0.46
SMPD1-201ENST00000342245 CYP17A1P05093 508 aa17.91■□□□□ 0.46
SMPD1-201ENST00000342245 ODC1P11926 461 aa17.91■□□□□ 0.46
SMPD1-201ENST00000342245 NUDT6P53370 316 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms