RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 PDPK2PQ6A1A2 396 aa10.31□□□□□ -0.76
ATXN3-201ENST00000340660 KIAA0408Q6ZU52 694 aa10.31□□□□□ -0.76
ATXN3-201ENST00000340660 LANCL3Q6ZV70 420 aa10.31□□□□□ -0.76
ATXN3-201ENST00000340660 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP10.31□□□□□ -0.76
ATXN3-201ENST00000340660 RASGEF1AQ8N9B8 481 aa10.31□□□□□ -0.76
ATXN3-201ENST00000340660 NTAN1Q96AB6 310 aa10.31□□□□□ -0.76
ATXN3-201ENST00000340660 ZNF285Q96NJ3 590 aa10.31□□□□□ -0.76
ATXN3-201ENST00000340660 SH2D2AQ9NP31 389 aa10.31□□□□□ -0.76
ATXN3-201ENST00000340660 DEPPQ9NTK1 212 aa10.31□□□□□ -0.76
ATXN3-201ENST00000340660 STOX2Q9P2F5 926 aaPredicted RBP10.31□□□□□ -0.76
ATXN3-201ENST00000340660 WIF1Q9Y5W5 379 aa10.31□□□□□ -0.76
ATXN3-201ENST00000340660 EML6Q6ZMW3 1958 aa10.3□□□□□ -0.76
ATXN3-201ENST00000340660 CADP27708 2225 aa10.3□□□□□ -0.76
ATXN3-201ENST00000340660 SNRNP200O75643 2136 aaKnown RBP10.3□□□□□ -0.76
ATXN3-201ENST00000340660 FGF10O15520 208 aaPredicted RBP10.3□□□□□ -0.76
ATXN3-201ENST00000340660 NDUFS7O75251 213 aa10.3□□□□□ -0.76
ATXN3-201ENST00000340660 SLC35G4P0C7Q5 338 aa10.3□□□□□ -0.76
ATXN3-201ENST00000340660 C8orf89P0DMQ9 161 aa10.3□□□□□ -0.76
ATXN3-201ENST00000340660 ENDOUP21128 410 aaKnown RBP10.3□□□□□ -0.76
ATXN3-201ENST00000340660 CRYGSP22914 178 aa10.3□□□□□ -0.76
ATXN3-201ENST00000340660 HSPA9P38646 679 aaKnown RBP10.3□□□□□ -0.76
ATXN3-201ENST00000340660 MC3RP41968 323 aa10.3□□□□□ -0.76
ATXN3-201ENST00000340660 PRCPP42785 496 aa10.3□□□□□ -0.76
ATXN3-201ENST00000340660 GABRB2P47870 512 aa10.3□□□□□ -0.76
ATXN3-201ENST00000340660 FMO5P49326 533 aa10.3□□□□□ -0.76
ATXN3-201ENST00000340660 ETF1P62495 437 aaKnown RBP10.3□□□□□ -0.76
ATXN3-201ENST00000340660 RPS26P62854 115 aaKnown RBP10.3□□□□□ -0.76
ATXN3-201ENST00000340660 LILRA3Q8N6C8 439 aaPredicted RBP10.3□□□□□ -0.76
ATXN3-201ENST00000340660 NPWQ8N729 165 aa10.3□□□□□ -0.76
ATXN3-201ENST00000340660 TTC29Q8NA56 475 aaPredicted RBP10.3□□□□□ -0.76
ATXN3-201ENST00000340660 TUBGCP2Q9BSJ2 902 aa10.3□□□□□ -0.76
ATXN3-201ENST00000340660 MAGEF1Q9HAY2 307 aa10.3□□□□□ -0.76
ATXN3-201ENST00000340660 MMP25Q9NPA2 562 aa10.3□□□□□ -0.76
ATXN3-201ENST00000340660 SPRR3Q9UBC9 169 aa10.3□□□□□ -0.76
ATXN3-201ENST00000340660 TRPC4Q9UBN4 977 aa10.3□□□□□ -0.76
ATXN3-201ENST00000340660 NDRG3Q9UGV2 375 aa10.3□□□□□ -0.76
ATXN3-201ENST00000340660 CTNND2Q9UQB3 1225 aa10.3□□□□□ -0.76
ATXN3-201ENST00000340660 CHKBQ9Y259 395 aa10.3□□□□□ -0.76
ATXN3-201ENST00000340660 OR2AG2A6NM03 316 aa10.29□□□□□ -0.76
ATXN3-201ENST00000340660 BECN2A8MW95 431 aa10.29□□□□□ -0.76
ATXN3-201ENST00000340660 RFC1P35251 1148 aaPredicted RBP10.29□□□□□ -0.76
ATXN3-201ENST00000340660 HLCSP50747 726 aa10.29□□□□□ -0.76
ATXN3-201ENST00000340660 RPS4XP62701 263 aaKnown RBP10.29□□□□□ -0.76
ATXN3-201ENST00000340660 ANKRD20A8PQ5CZ79 823 aa10.29□□□□□ -0.76
ATXN3-201ENST00000340660 ZC3H12BQ5HYM0 836 aaKnown RBP10.29□□□□□ -0.76
ATXN3-201ENST00000340660 RALGPS1Q5JS13 557 aa10.29□□□□□ -0.76
ATXN3-201ENST00000340660 FAM166AQ6J272 317 aa10.29□□□□□ -0.76
ATXN3-201ENST00000340660 PRMT9Q6P2P2 845 aa10.29□□□□□ -0.76
ATXN3-201ENST00000340660 TMEM220Q6QAJ8 160 aa10.29□□□□□ -0.76
ATXN3-201ENST00000340660 MDGA2Q7Z553 956 aa10.29□□□□□ -0.76
ATXN3-201ENST00000340660 CPEB2Q7Z5Q1 589 aaKnown RBP10.29□□□□□ -0.76
ATXN3-201ENST00000340660 M1APQ8TC57 530 aa10.29□□□□□ -0.76
ATXN3-201ENST00000340660 FAM216AQ8WUB2 273 aa10.29□□□□□ -0.76
ATXN3-201ENST00000340660 TRMT61AQ96FX7 289 aaKnown RBP10.29□□□□□ -0.76
ATXN3-201ENST00000340660 RBM41Q96IZ5 413 aaKnown RBP10.29□□□□□ -0.76
ATXN3-201ENST00000340660 WFIKKN1Q96NZ8 548 aa10.29□□□□□ -0.76
ATXN3-201ENST00000340660 FERD3LQ96RJ6 166 aa10.29□□□□□ -0.76
ATXN3-201ENST00000340660 C14orf105Q9NVL8 296 aa10.29□□□□□ -0.76
ATXN3-201ENST00000340660 KLHL28Q9NXS3 571 aa10.29□□□□□ -0.76
ATXN3-201ENST00000340660 ACSL5Q9ULC5 683 aa10.29□□□□□ -0.76
ATXN3-201ENST00000340660 ICKQ9UPZ9 632 aa10.29□□□□□ -0.76
ATXN3-201ENST00000340660 LAMP3Q9UQV4 416 aa10.29□□□□□ -0.76
ATXN3-201ENST00000340660 FAM234BA2RU67 622 aa10.28□□□□□ -0.76
ATXN3-201ENST00000340660 NDC80O14777 642 aa10.28□□□□□ -0.76
ATXN3-201ENST00000340660 OR10H2O60403 315 aa10.28□□□□□ -0.76
ATXN3-201ENST00000340660 ITGA10O75578 1167 aa10.28□□□□□ -0.76
ATXN3-201ENST00000340660 SERPINC1P01008 464 aa10.28□□□□□ -0.76
ATXN3-201ENST00000340660 MAGP20916 626 aa10.28□□□□□ -0.76
ATXN3-201ENST00000340660 TRHRP34981 398 aaPredicted RBP10.28□□□□□ -0.76
ATXN3-201ENST00000340660 TIMP3P35625 211 aa10.28□□□□□ -0.76
ATXN3-201ENST00000340660 CDKN1AP38936 164 aa10.28□□□□□ -0.76
ATXN3-201ENST00000340660 PTPN9P43378 593 aa10.28□□□□□ -0.76
ATXN3-201ENST00000340660 MTTPP55157 894 aa10.28□□□□□ -0.76
ATXN3-201ENST00000340660 ADARP55265 1226 aaKnown RBP10.28□□□□□ -0.76
ATXN3-201ENST00000340660 AP1B1Q10567 949 aa10.28□□□□□ -0.76
ATXN3-201ENST00000340660 SIX1Q15475 284 aaPredicted RBP10.28□□□□□ -0.76
ATXN3-201ENST00000340660 ZNF124Q15973 351 aa10.28□□□□□ -0.76
ATXN3-201ENST00000340660 FAM214AQ32MH5 1076 aa10.28□□□□□ -0.76
ATXN3-201ENST00000340660 SFRP5Q5T4F7 317 aa10.28□□□□□ -0.76
ATXN3-201ENST00000340660 SLFN11Q7Z7L1 901 aa10.28□□□□□ -0.76
ATXN3-201ENST00000340660 RPS19BP1Q86WX3 136 aaKnown RBP10.28□□□□□ -0.76
ATXN3-201ENST00000340660 MFSD4AQ8N468 514 aa10.28□□□□□ -0.76
ATXN3-201ENST00000340660 LPCAT1Q8NF37 534 aa10.28□□□□□ -0.76
ATXN3-201ENST00000340660 CCHCR1Q8TD31 782 aa10.28□□□□□ -0.76
ATXN3-201ENST00000340660 SARAFQ96BY9 339 aa10.28□□□□□ -0.76
ATXN3-201ENST00000340660 C18orf8Q96DM3 657 aa10.28□□□□□ -0.76
ATXN3-201ENST00000340660 ZSCAN31Q96LW9 406 aaPredicted RBP10.28□□□□□ -0.76
ATXN3-201ENST00000340660 ZNF599Q96NL3 588 aa10.28□□□□□ -0.76
ATXN3-201ENST00000340660 CLSTN2Q9H4D0 955 aa10.28□□□□□ -0.76
ATXN3-201ENST00000340660 METTL5Q9NRN9 209 aaKnown RBP10.28□□□□□ -0.76
ATXN3-201ENST00000340660 NFKBIL1Q9UBC1 381 aaPredicted RBP10.28□□□□□ -0.76
ATXN3-201ENST00000340660 INTUQ9ULD6 942 aa10.28□□□□□ -0.76
ATXN3-201ENST00000340660 HEBP2Q9Y5Z4 205 aa10.28□□□□□ -0.76
ATXN3-201ENST00000340660 CAPN6Q9Y6Q1 641 aa10.28□□□□□ -0.76
ATXN3-201ENST00000340660 A0A0A6YYJ9 748 aa10.27□□□□□ -0.77
ATXN3-201ENST00000340660 A0A0G2JMM0 328 aa10.27□□□□□ -0.77
ATXN3-201ENST00000340660 A0A1W2PPB8 328 aa10.27□□□□□ -0.77
ATXN3-201ENST00000340660 A0A1W2PRS3 328 aa10.27□□□□□ -0.77
ATXN3-201ENST00000340660 ZNF503-AS2A6NEH8 195 aa10.27□□□□□ -0.77
ATXN3-201ENST00000340660 KIR3DP1A8MWS1 328 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms