RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 BCL6P41182 706 aa18.28■□□□□ 0.52
SYNE4-202ENST00000340477 OR1D4P47884 311 aa18.28■□□□□ 0.52
SYNE4-202ENST00000340477 GLRBP48167 497 aa18.28■□□□□ 0.52
SYNE4-202ENST00000340477 SKP1P63208 163 aa18.28■□□□□ 0.52
SYNE4-202ENST00000340477 NFKB2Q00653 900 aa18.28■□□□□ 0.52
SYNE4-202ENST00000340477 IRF9Q00978 393 aa18.28■□□□□ 0.52
SYNE4-202ENST00000340477 RGS1Q08116 209 aa18.28■□□□□ 0.52
SYNE4-202ENST00000340477 IL10RAQ13651 578 aa18.28■□□□□ 0.52
SYNE4-202ENST00000340477 COL9A2Q14055 689 aaPredicted RBP18.28■□□□□ 0.52
SYNE4-202ENST00000340477 ZXDCQ2QGD7 858 aaPredicted RBP18.28■□□□□ 0.52
SYNE4-202ENST00000340477 CATSPEREQ5SY80 951 aa18.28■□□□□ 0.52
SYNE4-202ENST00000340477 NXPE4Q6UWF7 544 aa18.28■□□□□ 0.52
SYNE4-202ENST00000340477 OVCH1Q7RTY7 1134 aa18.28■□□□□ 0.52
SYNE4-202ENST00000340477 LRRC70Q7Z2Q7 622 aa18.28■□□□□ 0.52
SYNE4-202ENST00000340477 ISCA2Q86U28 154 aa18.28■□□□□ 0.52
SYNE4-202ENST00000340477 CENPLQ8N0S6 344 aaPredicted RBP18.28■□□□□ 0.52
SYNE4-202ENST00000340477 OR4K1Q8NGD4 311 aa18.28■□□□□ 0.52
SYNE4-202ENST00000340477 OR2Y1Q8NGV0 311 aa18.28■□□□□ 0.52
SYNE4-202ENST00000340477 DCAKDQ8WVC6 231 aa18.28■□□□□ 0.52
SYNE4-202ENST00000340477 SLC13A3Q8WWT9 602 aa18.28■□□□□ 0.52
SYNE4-202ENST00000340477 MTBPQ96DY7 904 aa18.28■□□□□ 0.52
SYNE4-202ENST00000340477 ADNPQ9H2P0 1102 aa18.28■□□□□ 0.52
SYNE4-202ENST00000340477 MAU2Q9Y6X3 613 aa18.28■□□□□ 0.52
SYNE4-202ENST00000340477 IQANK1A0A1B0GTG1 560 aa18.27■□□□□ 0.52
SYNE4-202ENST00000340477 P2RX6O15547 441 aa18.27■□□□□ 0.52
SYNE4-202ENST00000340477 NDUFS4O43181 175 aa18.27■□□□□ 0.52
SYNE4-202ENST00000340477 CCNT2O60583 730 aaKnown RBP18.27■□□□□ 0.52
SYNE4-202ENST00000340477 ONECUT2O95948 504 aa18.27■□□□□ 0.52
SYNE4-202ENST00000340477 SERPIND1P05546 499 aa18.27■□□□□ 0.52
SYNE4-202ENST00000340477 GFAPP14136 432 aa18.27■□□□□ 0.52
SYNE4-202ENST00000340477 OTX2P32243 289 aa18.27■□□□□ 0.52
SYNE4-202ENST00000340477 GGT5P36269 586 aa18.27■□□□□ 0.52
SYNE4-202ENST00000340477 GDF5P43026 501 aa18.27■□□□□ 0.52
SYNE4-202ENST00000340477 HSPA7P48741 367 aa18.27■□□□□ 0.52
SYNE4-202ENST00000340477 POLE2P56282 527 aa18.27■□□□□ 0.52
SYNE4-202ENST00000340477 REEP5Q00765 189 aa18.27■□□□□ 0.52
SYNE4-202ENST00000340477 MEF2AQ02078 507 aaPredicted RBP18.27■□□□□ 0.52
SYNE4-202ENST00000340477 DLG1Q12959 904 aa18.27■□□□□ 0.52
SYNE4-202ENST00000340477 DSG2Q14126 1118 aa18.27■□□□□ 0.52
SYNE4-202ENST00000340477 FAM53BQ14153 422 aa18.27■□□□□ 0.52
SYNE4-202ENST00000340477 SSPNQ14714 243 aa18.27■□□□□ 0.52
SYNE4-202ENST00000340477 PDK4Q16654 411 aa18.27■□□□□ 0.52
SYNE4-202ENST00000340477 TSNAXIP1Q2TAA8 658 aa18.27■□□□□ 0.52
SYNE4-202ENST00000340477 SOWAHCQ53LP3 525 aaPredicted RBP18.27■□□□□ 0.52
SYNE4-202ENST00000340477 MRPL14Q6P1L8 145 aaKnown RBP18.27■□□□□ 0.52
SYNE4-202ENST00000340477 KRT78Q8N1N4 520 aa18.27■□□□□ 0.52
SYNE4-202ENST00000340477 UBLCP1Q8WVY7 318 aaPredicted RBP18.27■□□□□ 0.52
SYNE4-202ENST00000340477 ISL2Q96A47 359 aa18.27■□□□□ 0.52
SYNE4-202ENST00000340477 MMABQ96EY8 250 aaPredicted RBP18.27■□□□□ 0.52
SYNE4-202ENST00000340477 VPS50Q96JG6 964 aa18.27■□□□□ 0.52
SYNE4-202ENST00000340477 TMEM79Q9BSE2 394 aa18.27■□□□□ 0.52
SYNE4-202ENST00000340477 SARGQ9BW04 601 aa18.27■□□□□ 0.52
SYNE4-202ENST00000340477 YIPF2Q9BWQ6 316 aa18.27■□□□□ 0.52
SYNE4-202ENST00000340477 SLC26A1Q9H2B4 701 aa18.27■□□□□ 0.52
SYNE4-202ENST00000340477 PRM3Q9NNZ6 103 aa18.27■□□□□ 0.52
SYNE4-202ENST00000340477 ZNF282Q9UDV7 671 aaPredicted RBP18.27■□□□□ 0.52
SYNE4-202ENST00000340477 FETUBQ9UGM5 382 aa18.27■□□□□ 0.52
SYNE4-202ENST00000340477 UBXN8O00124 270 aa18.26■□□□□ 0.51
SYNE4-202ENST00000340477 PEX12O00623 359 aa18.26■□□□□ 0.51
SYNE4-202ENST00000340477 RFPL1O75677 317 aa18.26■□□□□ 0.51
SYNE4-202ENST00000340477 IGHEP01854 428 aa18.26■□□□□ 0.51
SYNE4-202ENST00000340477 STATHP02808 62 aa18.26■□□□□ 0.51
SYNE4-202ENST00000340477 FAM87AP0C7U9 286 aa18.26■□□□□ 0.51
SYNE4-202ENST00000340477 COL6A2P12110 1019 aa18.26■□□□□ 0.51
SYNE4-202ENST00000340477 AHRP35869 848 aa18.26■□□□□ 0.51
SYNE4-202ENST00000340477 GMPRP36959 345 aa18.26■□□□□ 0.51
SYNE4-202ENST00000340477 RRADP55042 308 aa18.26■□□□□ 0.51
SYNE4-202ENST00000340477 LY6DQ14210 128 aa18.26■□□□□ 0.51
SYNE4-202ENST00000340477 SLC29A2Q14542 456 aa18.26■□□□□ 0.51
SYNE4-202ENST00000340477 RBBP5Q15291 538 aaKnown RBP18.26■□□□□ 0.51
SYNE4-202ENST00000340477 C18orf21Q32NC0 220 aaPredicted RBP18.26■□□□□ 0.51
SYNE4-202ENST00000340477 LINC00303Q3SY05 128 aa18.26■□□□□ 0.51
SYNE4-202ENST00000340477 VN1R4Q7Z5H5 301 aa18.26■□□□□ 0.51
SYNE4-202ENST00000340477 TTLQ8NG68 377 aa18.26■□□□□ 0.51
SYNE4-202ENST00000340477 ZDHHC19Q8WVZ1 309 aaPredicted RBP18.26■□□□□ 0.51
SYNE4-202ENST00000340477 SCYL1Q96KG9 808 aa18.26■□□□□ 0.51
SYNE4-202ENST00000340477 ATOH8Q96SQ7 321 aa18.26■□□□□ 0.51
SYNE4-202ENST00000340477 TXLNGYQ9BZA5 131 aa18.26■□□□□ 0.51
SYNE4-202ENST00000340477 ANKHQ9HCJ1 492 aa18.26■□□□□ 0.51
SYNE4-202ENST00000340477 PSMC3IPQ9P2W1 217 aaPredicted RBP18.26■□□□□ 0.51
SYNE4-202ENST00000340477 OPTCQ9UBM4 332 aa18.26■□□□□ 0.51
SYNE4-202ENST00000340477 PTBP2Q9UKA9 531 aaKnown RBP18.26■□□□□ 0.51
SYNE4-202ENST00000340477 G3BP2Q9UN86 482 aaKnown RBP18.26■□□□□ 0.51
SYNE4-202ENST00000340477 ANGPTL3Q9Y5C1 460 aa18.26■□□□□ 0.51
SYNE4-202ENST00000340477 LOC400499M0QZD8 3231 aa18.26■□□□□ 0.51
SYNE4-202ENST00000340477 URADA6NGE7 173 aa18.25■□□□□ 0.51
SYNE4-202ENST00000340477 TAPBPO15533 448 aa18.25■□□□□ 0.51
SYNE4-202ENST00000340477 KLF7O75840 302 aaPredicted RBP18.25■□□□□ 0.51
SYNE4-202ENST00000340477 RBP1P09455 135 aa18.25■□□□□ 0.51
SYNE4-202ENST00000340477 FURINP09958 794 aa18.25■□□□□ 0.51
SYNE4-202ENST00000340477 C1GALT1C1LP0DN25 315 aa18.25■□□□□ 0.51
SYNE4-202ENST00000340477 MAGEA12P43365 314 aa18.25■□□□□ 0.51
SYNE4-202ENST00000340477 SCTRP47872 440 aa18.25■□□□□ 0.51
SYNE4-202ENST00000340477 CSRP3P50461 194 aa18.25■□□□□ 0.51
SYNE4-202ENST00000340477 KCNAB2Q13303 367 aa18.25■□□□□ 0.51
SYNE4-202ENST00000340477 PWP1Q13610 501 aa18.25■□□□□ 0.51
SYNE4-202ENST00000340477 ATG9BQ674R7 924 aa18.25■□□□□ 0.51
SYNE4-202ENST00000340477 NIPAL1Q6NVV3 410 aa18.25■□□□□ 0.51
SYNE4-202ENST00000340477 TRPV3Q8NET8 790 aa18.25■□□□□ 0.51
SYNE4-202ENST00000340477 ZCCHC10Q8TBK6 192 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms