RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 PCDHB16Q9NRJ7 776 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 ATP7BP35670 1465 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 GNAZP19086 355 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 TMEM53Q6P2H8 277 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 FAM122CQ6P4D5 195 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 GPAT4Q86UL3 456 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 RASGEF1CQ8N431 466 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 GOLM1Q8NBJ4 401 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 ST7LQ8TDW4 575 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 EPS8L1Q8TE68 723 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 COPS5Q92905 334 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 CCDC74BQ96LY2 380 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 CD180Q99467 661 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 DPEP2Q9H4A9 486 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 GLYATL1P3A0A0U1RQE8 302 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 NT5C1B-RDH14C9J2C7 533 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 INMT-MINDY4F8WBC2 141 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 SPDEFO95238 335 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 HRGP04196 525 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 BMP8BP34820 402 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 INAVAQ3KP66 663 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 NKAPLQ5M9Q1 402 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 BMP8AQ7Z5Y6 402 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 ZBTB2Q8N680 514 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 PSKH2Q96QS6 385 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 SOX14O95416 240 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 CREMQ03060 361 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 TXNRD3Q86VQ6 643 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 CNTNAP3BQ96NU0 1288 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 TUBA1CQ9BQE3 449 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 EBF2Q9HAK2 575 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 B3GALT1Q9Y5Z6 326 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 CDH10Q9Y6N8 788 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 NFASCO94856 1347 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 FAM234BA2RU67 622 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 ZNF850A8MQ14 1090 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 AMY2BP19961 511 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 RAB6AP20340 208 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 PRMT2P55345 433 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 ZER1Q7Z7L7 766 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 TSPAN33Q86UF1 283 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 P2RY11Q96G91 374 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 SLC35A5Q9BS91 424 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 HINT2Q9BX68 163 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 RPP40O75818 363 aaKnown RBP12.5□□□□□ -0.41
USP47-202ENST00000339865 CKMT2P17540 419 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 PTNP21246 168 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 CD9P21926 228 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 TUSC3Q13454 348 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 TGFBIQ15582 683 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 C6orf132Q5T0Z8 1188 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 BORAQ6PGQ7 559 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 OTOP2Q7RTS6 562 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 DEFB132Q7Z7B7 95 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 COL21A1Q96P44 957 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 MYNNQ9NPC7 610 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 MRPL15Q9P015 296 aaKnown RBP12.5□□□□□ -0.41
USP47-202ENST00000339865 SLC7A8Q9UHI5 535 aa12.5□□□□□ -0.41
USP47-202ENST00000339865 HMGN1P05114 100 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 NR2C1P13056 603 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 CBLP22681 906 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 NBPF12Q5TAG4 269 aaPredicted RBP12.49□□□□□ -0.41
USP47-202ENST00000339865 SLC26A9Q7LBE3 791 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 LGI4Q8N135 537 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 AZIN2Q96A70 460 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 VRK1Q99986 396 aaPredicted RBP12.49□□□□□ -0.41
USP47-202ENST00000339865 EXTL2Q9UBQ6 330 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 hCG_1818297A0A087WSY0 165 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 C5orf60A6NFR6 353 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 B3GALT2O43825 422 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 CDK14O94921 469 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 CDK18Q07002 472 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 MPP7Q5T2T1 576 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 SDSLQ96GA7 329 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 MYO19Q96H55 970 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 ABCB8Q9NUT2 735 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 RNF6Q9Y252 685 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 MAGI2Q86UL8 1455 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 AGPAT2O15120 278 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 AQP2P41181 271 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 ACSBG2Q5FVE4 666 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 SH3PXD2AQ5TCZ1 1133 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 TMPRSS7Q7RTY8 843 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 ZNF439Q8NDP4 499 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 SLC38A3Q99624 504 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 LRRC3Q9BY71 257 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 C14orf119Q9NWQ9 140 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 ERVK13-1Q9NX77 482 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 COPZ2Q9P299 210 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 ZMAT5Q9UDW3 170 aaKnown RBP12.49□□□□□ -0.41
USP47-202ENST00000339865 RARRES1P49788 294 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 RAB5CP51148 216 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 RUNX2Q13950 521 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 DAG1Q14118 895 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 AVL9Q8NBF6 648 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 GEMIN6Q8WXD5 167 aaKnown RBP12.49□□□□□ -0.41
USP47-202ENST00000339865 HIF1ANQ9NWT6 349 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 HAO2Q9NYQ3 351 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 HPSEQ9Y251 543 aa12.49□□□□□ -0.41
USP47-202ENST00000339865 FKTNO75072 461 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms