RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 CDKL4Q5MAI5 379 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 IER5LQ5T953 404 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 MARVELD2Q8N4S9 558 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 REEP4Q9H6H4 257 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 DNAAF2Q9NVR5 837 aaKnown RBP6.09□□□□□ -1.43
PRKDC-202ENST00000338368 HCFC2Q9Y5Z7 792 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 E2F3O00716 465 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 C1QAP02745 245 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 ZNF763Q0D2J5 394 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 TLR1Q15399 786 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 SAMD14Q8IZD0 417 aaPredicted RBP6.09□□□□□ -1.43
PRKDC-202ENST00000338368 OR8H2Q8N162 312 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 ZNF347Q96SE7 839 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 C6orf62Q9GZU0 229 aaPredicted RBP6.09□□□□□ -1.43
PRKDC-202ENST00000338368 POLMQ9NP87 494 aaPredicted RBP6.09□□□□□ -1.43
PRKDC-202ENST00000338368 SAGE1Q9NXZ1 904 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 TMEM181Q9P2C4 612 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 PCDHB11Q9Y5F2 797 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 A0A0J9YVX5 310 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 EFCAB10A6NFE3 127 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 DUXAA6NLW8 204 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 PLK4O00444 970 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 DLGAP3O95886 979 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 KRT8P05787 483 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 OCM2P0CE71 109 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 OCMP0CE72 109 aaPredicted RBP6.09□□□□□ -1.43
PRKDC-202ENST00000338368 MYBPC3Q14896 1274 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 CNPY1Q3B7I2 92 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 ZNF776Q68DI1 518 aaPredicted RBP6.09□□□□□ -1.43
PRKDC-202ENST00000338368 TLDC1Q6P9B6 456 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 PLEKHM3Q6ZWE6 761 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 NTMT1Q9BV86 223 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 ZBP1Q9H171 429 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 NEUROD4Q9HD90 331 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 ADAP2Q9NPF8 381 aa6.09□□□□□ -1.43
PRKDC-202ENST00000338368 ZNF646O15015 1829 aaPredicted RBP6.09□□□□□ -1.44
PRKDC-202ENST00000338368 H7BY64 318 aa6.09□□□□□ -1.44
PRKDC-202ENST00000338368 CA3P07451 260 aa6.09□□□□□ -1.44
PRKDC-202ENST00000338368 DNAJA1P31689 397 aaKnown RBP6.09□□□□□ -1.44
PRKDC-202ENST00000338368 CCR8P51685 355 aa6.09□□□□□ -1.44
PRKDC-202ENST00000338368 TUBA4AP68366 448 aa6.09□□□□□ -1.44
PRKDC-202ENST00000338368 GTDC1Q4AE62 458 aa6.09□□□□□ -1.44
PRKDC-202ENST00000338368 C10orf62Q5T681 223 aaPredicted RBP6.09□□□□□ -1.44
PRKDC-202ENST00000338368 KBTBD2Q8IY47 623 aa6.09□□□□□ -1.44
PRKDC-202ENST00000338368 NRG4Q8WWG1 115 aa6.09□□□□□ -1.44
PRKDC-202ENST00000338368 CLIP3Q96DZ5 547 aa6.09□□□□□ -1.44
PRKDC-202ENST00000338368 EGLN2Q96KS0 407 aa6.09□□□□□ -1.44
PRKDC-202ENST00000338368 PRAP1Q96NZ9 151 aa6.09□□□□□ -1.44
PRKDC-202ENST00000338368 HS3ST2Q9Y278 367 aa6.09□□□□□ -1.44
PRKDC-202ENST00000338368 GPR45Q9Y5Y3 372 aa6.09□□□□□ -1.44
PRKDC-202ENST00000338368 PRAMEF12O95522 483 aa6.09□□□□□ -1.44
PRKDC-202ENST00000338368 KCNAB2Q13303 367 aa6.09□□□□□ -1.44
PRKDC-202ENST00000338368 HNRNPA1L2Q32P51 320 aaKnown RBP6.09□□□□□ -1.44
PRKDC-202ENST00000338368 FAM92BQ6ZTR7 304 aa6.09□□□□□ -1.44
PRKDC-202ENST00000338368 GALNT15Q8N3T1 639 aa6.09□□□□□ -1.44
PRKDC-202ENST00000338368 SMYD1Q8NB12 490 aa6.09□□□□□ -1.44
PRKDC-202ENST00000338368 PROKR1Q8TCW9 393 aa6.09□□□□□ -1.44
PRKDC-202ENST00000338368 SOX17Q9H6I2 414 aaPredicted RBP6.09□□□□□ -1.44
PRKDC-202ENST00000338368 STON1Q9Y6Q2 735 aa6.09□□□□□ -1.44
PRKDC-202ENST00000338368 UBFD1O14562 309 aaKnown RBP6.08□□□□□ -1.44
PRKDC-202ENST00000338368 ERI3O43414 337 aaKnown RBP6.08□□□□□ -1.44
PRKDC-202ENST00000338368 TPST2O60704 377 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 ZNF8P17098 575 aaPredicted RBP6.08□□□□□ -1.44
PRKDC-202ENST00000338368 GJA8P48165 433 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 ALDH3A2P51648 485 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 SMU1Q2TAY7 513 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 P2RY8Q86VZ1 359 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 ANKFN1Q8N957 763 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 WBP2Q969T9 261 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 RGMAQ96B86 450 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 SFXN1Q9H9B4 322 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 SMURF2Q9HAU4 748 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 PTTG2Q9NZH5 202 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 CALML5Q9NZT1 146 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 LYVE1Q9Y5Y7 322 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 FAM47E-STBD1D6RA91 191 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 ARNTLO00327 626 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 CXCL10P02778 98 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 MMP2P08253 660 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 CD247P20963 164 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 PIK3CBP42338 1070 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 CTSCP53634 463 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 OLR1P78380 273 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 NR1D2Q14995 579 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 MEP1AQ16819 746 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 SLC44A4Q53GD3 710 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 GPR153Q6NV75 609 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 HSD11B1LQ7Z5J1 315 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 EPHX4Q8IUS5 362 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 COL21A1Q96P44 957 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 YIPF4Q9BSR8 244 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 COPS4Q9BT78 406 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 TAS2R9Q9NYW1 312 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 TRBC2A0A5B9 178 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 ARHGEF15O94989 841 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 C1SP09871 688 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 ALDOCP09972 364 aaKnown RBP6.08□□□□□ -1.44
PRKDC-202ENST00000338368 SUOXP51687 545 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 LBX1P52954 281 aa6.08□□□□□ -1.44
PRKDC-202ENST00000338368 ARSFP54793 590 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 78.3 ms