RNA–Protein interactions for RNA: ENST00000334654.4

CHGA-202, Transcript of chromogranin A, humanhuman

TSL 1 (best) BASIC

Gene CHGA, Length 1,474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-202ENST00000334654 CXCR2P25025 360 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 RPS15AP62244 130 aaKnown RBP16.73■□□□□ 0.27
CHGA-202ENST00000334654 GUCY1A3Q02108 690 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 CYP4F3Q08477 520 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 TARDBPQ13148 414 aaKnown RBP eCLIP16.73■□□□□ 0.27
CHGA-202ENST00000334654 ZRSR2Q15696 482 aaKnown RBP16.73■□□□□ 0.27
CHGA-202ENST00000334654 GPR19Q15760 415 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 UGT3A2Q3SY77 523 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 RGS9BPQ6ZS82 235 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 TMPRSS7Q7RTY8 843 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 KRT78Q8N1N4 520 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 CHCHD4Q8N4Q1 142 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 CDYL2Q8N8U2 506 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 MFSD9Q8NBP5 474 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 AGBL5Q8NDL9 886 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 ZNF501Q96CX3 271 aaPredicted RBP16.73■□□□□ 0.27
CHGA-202ENST00000334654 TM4SF19Q96DZ7 209 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 MAGEB18Q96M61 343 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 RHBGQ9H310 441 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 THAP1Q9NVV9 213 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 TSC22D4Q9Y3Q8 395 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 TIMM22Q9Y584 194 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 AP1M2Q9Y6Q5 423 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 FAM149AA5PLN7 773 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 H0YGG7 62 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 CAPN1P07384 714 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 HGFP14210 728 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 CSTF2P33240 577 aaKnown RBP eCLIP16.73■□□□□ 0.27
CHGA-202ENST00000334654 GRK3P35626 688 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 MDH1P40925 334 aaKnown RBP16.73■□□□□ 0.27
CHGA-202ENST00000334654 ARL4DP49703 201 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 ARF3P61204 181 aaPredicted RBP16.73■□□□□ 0.27
CHGA-202ENST00000334654 RBBP5Q15291 538 aaKnown RBP16.73■□□□□ 0.27
CHGA-202ENST00000334654 ZC3H12BQ5HYM0 836 aaKnown RBP16.73■□□□□ 0.27
CHGA-202ENST00000334654 PAGE2BQ5JRK9 111 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 TCHHL1Q5QJ38 904 aaPredicted RBP16.73■□□□□ 0.27
CHGA-202ENST00000334654 ATG16L1Q676U5 607 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 MED27Q6P2C8 311 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 MYLK4Q86YV6 388 aaPredicted RBP16.73■□□□□ 0.27
CHGA-202ENST00000334654 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.73■□□□□ 0.27
CHGA-202ENST00000334654 RNF175Q8N4F7 328 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 CREB3L4Q8TEY5 395 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 DYDC1Q8WWB3 177 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 THAP11Q96EK4 314 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 FGF21Q9NSA1 209 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 ZFP69BQ9UJL9 534 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 PLCL2Q9UPR0 1127 aa16.73■□□□□ 0.27
CHGA-202ENST00000334654 EFCAB7A8K855 629 aa16.72■□□□□ 0.27
CHGA-202ENST00000334654 TMEM233B4DJY2 109 aa16.72■□□□□ 0.27
CHGA-202ENST00000334654 FFAR3O14843 346 aa16.72■□□□□ 0.27
CHGA-202ENST00000334654 GPR42O15529 346 aa16.72■□□□□ 0.27
CHGA-202ENST00000334654 HSPA4LO95757 839 aa16.72■□□□□ 0.27
CHGA-202ENST00000334654 ENO1P06733 434 aaKnown RBP16.72■□□□□ 0.27
CHGA-202ENST00000334654 SERPINB3P29508 390 aa16.72■□□□□ 0.27
CHGA-202ENST00000334654 AHRP35869 848 aa16.72■□□□□ 0.27
CHGA-202ENST00000334654 ARL1P40616 181 aaPredicted RBP16.72■□□□□ 0.27
CHGA-202ENST00000334654 ETV5P41161 510 aa16.72■□□□□ 0.27
CHGA-202ENST00000334654 HTR6P50406 440 aa16.72■□□□□ 0.27
CHGA-202ENST00000334654 NEK2P51955 445 aa16.72■□□□□ 0.27
CHGA-202ENST00000334654 GYS2P54840 703 aa16.72■□□□□ 0.27
CHGA-202ENST00000334654 SNRPNP63162 240 aaKnown RBP16.72■□□□□ 0.27
CHGA-202ENST00000334654 MC2RQ01718 297 aa16.72■□□□□ 0.27
CHGA-202ENST00000334654 HYAL2Q12891 473 aa16.72■□□□□ 0.27
CHGA-202ENST00000334654 HIST2H2ACQ16777 129 aaPredicted RBP16.72■□□□□ 0.27
CHGA-202ENST00000334654 TMTC4Q5T4D3 741 aa16.72■□□□□ 0.27
CHGA-202ENST00000334654 CLEC6AQ6EIG7 209 aa16.72■□□□□ 0.27
CHGA-202ENST00000334654 HIST2H2AA3Q6FI13 130 aa16.72■□□□□ 0.27
CHGA-202ENST00000334654 ZNF781Q8N8C0 355 aa16.72■□□□□ 0.27
CHGA-202ENST00000334654 OR1L3Q8NH93 324 aa16.72■□□□□ 0.27
CHGA-202ENST00000334654 METTL6Q8TCB7 284 aa16.72■□□□□ 0.27
CHGA-202ENST00000334654 ZNF473Q8WTR7 871 aaKnown RBP16.72■□□□□ 0.27
CHGA-202ENST00000334654 SLC29A3Q9BZD2 475 aa16.72■□□□□ 0.27
CHGA-202ENST00000334654 STRADBQ9C0K7 418 aa16.72■□□□□ 0.27
CHGA-202ENST00000334654 AICDAQ9GZX7 198 aa16.72■□□□□ 0.27
CHGA-202ENST00000334654 EML4Q9HC35 981 aaKnown RBP16.72■□□□□ 0.27
CHGA-202ENST00000334654 APMAPQ9HDC9 416 aa16.72■□□□□ 0.27
CHGA-202ENST00000334654 SLCO1B3Q9NPD5 702 aa16.72■□□□□ 0.27
CHGA-202ENST00000334654 FARSBQ9NSD9 589 aaKnown RBP16.72■□□□□ 0.27
CHGA-202ENST00000334654 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.72■□□□□ 0.27
CHGA-202ENST00000334654 RAP2CQ9Y3L5 183 aa16.72■□□□□ 0.27
CHGA-202ENST00000334654 PCDHGA11Q9Y5H2 935 aa16.72■□□□□ 0.27
CHGA-202ENST00000334654 CCDC187A0A096LP49 1063 aa16.71■□□□□ 0.27
CHGA-202ENST00000334654 MANBAO00462 879 aa16.71■□□□□ 0.27
CHGA-202ENST00000334654 AZIN1O14977 448 aa16.71■□□□□ 0.27
CHGA-202ENST00000334654 P2RX6O15547 441 aa16.71■□□□□ 0.27
CHGA-202ENST00000334654 SRPX2O60687 465 aaPredicted RBP16.71■□□□□ 0.27
CHGA-202ENST00000334654 STATHP02808 62 aa16.71■□□□□ 0.27
CHGA-202ENST00000334654 ITIH1P19827 911 aa16.71■□□□□ 0.27
CHGA-202ENST00000334654 GCGRP47871 477 aa16.71■□□□□ 0.27
CHGA-202ENST00000334654 VSX2P58304 361 aaPredicted RBP16.71■□□□□ 0.27
CHGA-202ENST00000334654 ACY1Q03154 408 aa16.71■□□□□ 0.27
CHGA-202ENST00000334654 PRTGQ2VWP7 1150 aa16.71■□□□□ 0.27
CHGA-202ENST00000334654 SH2D4BQ5SQS7 431 aa16.71■□□□□ 0.27
CHGA-202ENST00000334654 KANK2Q63ZY3 851 aa16.71■□□□□ 0.27
CHGA-202ENST00000334654 RAB11FIP2Q7L804 512 aa16.71■□□□□ 0.27
CHGA-202ENST00000334654 GALNT15Q8N3T1 639 aa16.71■□□□□ 0.27
CHGA-202ENST00000334654 ARHGEF39Q8N4T4 335 aa16.71■□□□□ 0.27
CHGA-202ENST00000334654 LRRC8CQ8TDW0 803 aa16.71■□□□□ 0.27
CHGA-202ENST00000334654 MAGEB10Q96LZ2 347 aaPredicted RBP16.71■□□□□ 0.27
CHGA-202ENST00000334654 OR6C1Q96RD1 312 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms