RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 CADM2Q8N3J6 435 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 CLDN19Q8N6F1 224 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 LSMEM1Q8N8F7 131 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 FATE1Q969F0 183 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 TRIM63Q969Q1 353 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 HRASLS5Q96KN8 279 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 APOLD1Q96LR9 279 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 MMP28Q9H239 520 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 TIGARQ9NQ88 270 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 OGDHLQ9ULD0 1010 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 DUSP12Q9UNI6 340 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 DHRS7Q9Y394 339 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 FAM25AB3EWG3 89 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 FAM25CB3EWG5 89 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 FAM25GB3EWG6 89 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 EPN2O95208 641 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 SNX4O95219 450 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 GRK4P32298 578 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 ETV3P41162 512 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 KIR3DL1P43629 444 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 GATMP50440 423 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 CD83Q01151 205 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 ZNF683Q8IZ20 524 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 ST6GAL2Q96JF0 529 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 CNPPD1Q9BV87 410 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 NPAP1Q9NZP6 1156 aa13.3□□□□□ -0.28
SYNE3-201ENST00000334258 UBA2Q9UBT2 640 aaPredicted RBP13.3□□□□□ -0.28
SYNE3-201ENST00000334258 GFRA2O00451 464 aa13.29□□□□□ -0.28
SYNE3-201ENST00000334258 FPGTO14772 594 aa13.29□□□□□ -0.28
SYNE3-201ENST00000334258 SCAMP3O14828 347 aaKnown RBP13.29□□□□□ -0.28
SYNE3-201ENST00000334258 INSIG1O15503 277 aa13.29□□□□□ -0.28
SYNE3-201ENST00000334258 TAPBPO15533 448 aa13.29□□□□□ -0.28
SYNE3-201ENST00000334258 ADAMTS4O75173 837 aa13.29□□□□□ -0.28
SYNE3-201ENST00000334258 TM4SF4P48230 202 aa13.29□□□□□ -0.28
SYNE3-201ENST00000334258 CLCN7P51798 805 aa13.29□□□□□ -0.28
SYNE3-201ENST00000334258 ANGPTL8Q6UXH0 198 aa13.29□□□□□ -0.28
SYNE3-201ENST00000334258 MBOAT1Q6ZNC8 495 aa13.29□□□□□ -0.28
SYNE3-201ENST00000334258 DNAJB8Q8NHS0 232 aa13.29□□□□□ -0.28
SYNE3-201ENST00000334258 SKA2Q8WVK7 121 aaPredicted RBP13.29□□□□□ -0.28
SYNE3-201ENST00000334258 MYEOVQ96EZ4 313 aa13.29□□□□□ -0.28
SYNE3-201ENST00000334258 TRIB3Q96RU7 358 aa13.29□□□□□ -0.28
SYNE3-201ENST00000334258 TLR8Q9NR97 1041 aaKnown RBP13.29□□□□□ -0.28
SYNE3-201ENST00000334258 OLA1Q9NTK5 396 aaKnown RBP13.29□□□□□ -0.28
SYNE3-201ENST00000334258 NUFIP1Q9UHK0 495 aaKnown RBP13.29□□□□□ -0.28
SYNE3-201ENST00000334258 RAI2Q9Y5P3 530 aa13.29□□□□□ -0.28
SYNE3-201ENST00000334258 MEIOCA2RUB1 952 aa13.29□□□□□ -0.28
SYNE3-201ENST00000334258 H3BQ06 376 aaPredicted RBP13.29□□□□□ -0.28
SYNE3-201ENST00000334258 CBX4O00257 560 aa13.29□□□□□ -0.28
SYNE3-201ENST00000334258 B4GALT3O60512 393 aa13.29□□□□□ -0.28
SYNE3-201ENST00000334258 SEMA3DO95025 777 aa13.29□□□□□ -0.28
SYNE3-201ENST00000334258 POU2F1P14859 743 aa13.29□□□□□ -0.28
SYNE3-201ENST00000334258 CLDN8P56748 225 aa13.29□□□□□ -0.28
SYNE3-201ENST00000334258 SLAMF1Q13291 335 aa13.29□□□□□ -0.28
SYNE3-201ENST00000334258 TMPRSS11AQ6ZMR5 421 aa13.29□□□□□ -0.28
SYNE3-201ENST00000334258 TRIM48Q8IWZ4 208 aa13.29□□□□□ -0.28
SYNE3-201ENST00000334258 ELMOD2Q8IZ81 293 aa13.29□□□□□ -0.28
SYNE3-201ENST00000334258 BEND7Q8N7W2 519 aaPredicted RBP13.29□□□□□ -0.28
SYNE3-201ENST00000334258 C8orf48Q96LL4 319 aa13.29□□□□□ -0.28
SYNE3-201ENST00000334258 FYTTD1Q96QD9 318 aaKnown RBP13.29□□□□□ -0.28
SYNE3-201ENST00000334258 SIGLEC11Q96RL6 698 aa13.29□□□□□ -0.28
SYNE3-201ENST00000334258 CCDC32Q9BV29 185 aa13.29□□□□□ -0.28
SYNE3-201ENST00000334258 GPR63Q9BZJ6 419 aa13.29□□□□□ -0.28
SYNE3-201ENST00000334258 CD244Q9BZW8 370 aa13.29□□□□□ -0.28
SYNE3-201ENST00000334258 ZNF304Q9HCX3 659 aa13.29□□□□□ -0.28
SYNE3-201ENST00000334258 RANGRFQ9HD47 186 aaPredicted RBP13.29□□□□□ -0.28
SYNE3-201ENST00000334258 TBC1D24Q9ULP9 559 aa13.29□□□□□ -0.28
SYNE3-201ENST00000334258 TRPV2Q9Y5S1 764 aa13.29□□□□□ -0.28
SYNE3-201ENST00000334258 RALGAPA2Q2PPJ7 1873 aa13.29□□□□□ -0.28
SYNE3-201ENST00000334258 SMARCB1Q12824 385 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 SUZ12Q15022 739 aaKnown RBP13.28□□□□□ -0.28
SYNE3-201ENST00000334258 TIMM50Q3ZCQ8 353 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 LRIF1Q5T3J3 769 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 OR2A14Q96R47 310 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 MGLLQ99685 303 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 PITX2Q99697 317 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 EBPLQ9BY08 206 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 ACPTQ9BZG2 426 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 NXF2Q9GZY0 626 aaKnown RBP13.28□□□□□ -0.28
SYNE3-201ENST00000334258 RERGLQ9H628 205 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 CREBZFQ9NS37 354 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 GRIP1Q9Y3R0 1128 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 MAU2Q9Y6X3 613 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 TNFRSF11BO00300 401 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 PLK4O00444 970 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 CAPN5O15484 640 aaPredicted RBP13.28□□□□□ -0.28
SYNE3-201ENST00000334258 SLC25A14O95258 325 aaPredicted RBP13.28□□□□□ -0.28
SYNE3-201ENST00000334258 YES1P07947 543 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 PIK3CBP42338 1070 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 ZNF438Q7Z4V0 828 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 TMCO2Q7Z6W1 182 aaPredicted RBP13.28□□□□□ -0.28
SYNE3-201ENST00000334258 CCDC190Q86UF4 302 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 GRPEL2Q8TAA5 225 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 OR5M11Q96RB7 305 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 ADGRE3Q9BY15 652 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 MRPL9Q9BYD2 267 aaKnown RBP13.28□□□□□ -0.28
SYNE3-201ENST00000334258 MS4A12Q9NXJ0 267 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 MUTYHQ9UIF7 546 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 PCDHGB3Q9Y5G1 929 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 SUV39H1O43463 412 aa13.28□□□□□ -0.28
SYNE3-201ENST00000334258 CPNE3O75131 537 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms