RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 OSBPL10Q9BXB5 764 aa16.77■□□□□ 0.28
DDX28-201ENST00000332395 DPEP2Q9H4A9 486 aa16.77■□□□□ 0.28
DDX28-201ENST00000332395 CERS4Q9HA82 394 aa16.77■□□□□ 0.28
DDX28-201ENST00000332395 ITM2CQ9NQX7 267 aa16.77■□□□□ 0.28
DDX28-201ENST00000332395 GNG14A0A1W2PPG7 69 aa16.77■□□□□ 0.27
DDX28-201ENST00000332395 GABRR3A8MPY1 467 aa16.77■□□□□ 0.27
DDX28-201ENST00000332395 C1QTNF3-AMACRE9PGA6 284 aa16.77■□□□□ 0.27
DDX28-201ENST00000332395 ACADLP28330 430 aa16.77■□□□□ 0.27
DDX28-201ENST00000332395 TIA1P31483 386 aaKnown RBP eCLIP16.77■□□□□ 0.27
DDX28-201ENST00000332395 GALK1P51570 392 aa16.77■□□□□ 0.27
DDX28-201ENST00000332395 PPP2R2BQ00005 443 aa16.77■□□□□ 0.27
DDX28-201ENST00000332395 SLBPQ14493 270 aaKnown RBP eCLIP16.77■□□□□ 0.27
DDX28-201ENST00000332395 DUSP6Q16828 381 aa16.77■□□□□ 0.27
DDX28-201ENST00000332395 CPTPQ5TA50 214 aa16.77■□□□□ 0.27
DDX28-201ENST00000332395 SPESP1Q6UW49 350 aa16.77■□□□□ 0.27
DDX28-201ENST00000332395 GPR155Q7Z3F1 870 aa16.77■□□□□ 0.27
DDX28-201ENST00000332395 LRRC56Q8IYG6 542 aaPredicted RBP16.77■□□□□ 0.27
DDX28-201ENST00000332395 EID3Q8N140 333 aa16.77■□□□□ 0.27
DDX28-201ENST00000332395 MUS81Q96NY9 551 aa16.77■□□□□ 0.27
DDX28-201ENST00000332395 EFCAB11Q9BUY7 163 aa16.77■□□□□ 0.27
DDX28-201ENST00000332395 SMURF2Q9HAU4 748 aa16.77■□□□□ 0.27
DDX28-201ENST00000332395 SAMD4AQ9UPU9 718 aaKnown RBP16.77■□□□□ 0.27
DDX28-201ENST00000332395 PCYT1BQ9Y5K3 369 aaPredicted RBP16.77■□□□□ 0.27
DDX28-201ENST00000332395 PCM1Q15154 2024 aa16.76■□□□□ 0.27
DDX28-201ENST00000332395 NUP214P35658 2090 aaPredicted RBP16.76■□□□□ 0.27
DDX28-201ENST00000332395 TRANK1O15050 2925 aa16.76■□□□□ 0.27
DDX28-201ENST00000332395 MGAT4DA6NG13 374 aa16.76■□□□□ 0.27
DDX28-201ENST00000332395 KCNK5O95279 499 aa16.76■□□□□ 0.27
DDX28-201ENST00000332395 EPHX1P07099 455 aa16.76■□□□□ 0.27
DDX28-201ENST00000332395 C1GALT1C1LP0DN25 315 aa16.76■□□□□ 0.27
DDX28-201ENST00000332395 EFNA1P20827 205 aaPredicted RBP16.76■□□□□ 0.27
DDX28-201ENST00000332395 FCARP24071 287 aa16.76■□□□□ 0.27
DDX28-201ENST00000332395 HPCAL1P37235 193 aa16.76■□□□□ 0.27
DDX28-201ENST00000332395 OPRD1P41143 372 aa16.76■□□□□ 0.27
DDX28-201ENST00000332395 LBX1P52954 281 aa16.76■□□□□ 0.27
DDX28-201ENST00000332395 CNTN1Q12860 1018 aa16.76■□□□□ 0.27
DDX28-201ENST00000332395 VMACQ2NL98 169 aa16.76■□□□□ 0.27
DDX28-201ENST00000332395 CAMKMTQ7Z624 323 aa16.76■□□□□ 0.27
DDX28-201ENST00000332395 C11orf96Q7Z7L8 435 aa16.76■□□□□ 0.27
DDX28-201ENST00000332395 ZZZ3Q8IYH5 903 aa16.76■□□□□ 0.27
DDX28-201ENST00000332395 PLA2G15Q8NCC3 412 aa16.76■□□□□ 0.27
DDX28-201ENST00000332395 ADAMTS16Q8TE57 1224 aa16.76■□□□□ 0.27
DDX28-201ENST00000332395 HDAC8Q9BY41 377 aa16.76■□□□□ 0.27
DDX28-201ENST00000332395 TOR3AQ9H497 397 aa16.76■□□□□ 0.27
DDX28-201ENST00000332395 PRSS16Q9NQE7 514 aa16.76■□□□□ 0.27
DDX28-201ENST00000332395 OBP2AQ9NY56 170 aa16.76■□□□□ 0.27
DDX28-201ENST00000332395 USE1Q9NZ43 259 aa16.76■□□□□ 0.27
DDX28-201ENST00000332395 MAPRE3Q9UPY8 281 aa16.76■□□□□ 0.27
DDX28-201ENST00000332395 ATG2AQ2TAZ0 1938 aa16.76■□□□□ 0.27
DDX28-201ENST00000332395 PIPSLA2A3N6 862 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 PCDH7O60245 1069 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 ZNF682O95780 498 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 MAGEA2P43356 314 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 ERVK-21P61565 698 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 PPP1R8Q12972 351 aaKnown RBP16.75■□□□□ 0.27
DDX28-201ENST00000332395 PAGE2BQ5JRK9 111 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 CCNYL2Q5T2Q4 361 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 C10orf62Q5T681 223 aaPredicted RBP16.75■□□□□ 0.27
DDX28-201ENST00000332395 TANGO2Q6ICL3 276 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 GALNT18Q6P9A2 607 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 FAM83HQ6ZRV2 1179 aaPredicted RBP16.75■□□□□ 0.27
DDX28-201ENST00000332395 ERI1Q8IV48 349 aaKnown RBP16.75■□□□□ 0.27
DDX28-201ENST00000332395 LAS2Q8IYD9 372 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 PNPT1Q8TCS8 783 aaKnown RBP16.75■□□□□ 0.27
DDX28-201ENST00000332395 RBM4BQ9BQ04 359 aaKnown RBP16.75■□□□□ 0.27
DDX28-201ENST00000332395 RBM4Q9BWF3 364 aaKnown RBP16.75■□□□□ 0.27
DDX28-201ENST00000332395 ZDHHC5Q9C0B5 715 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 EHD1Q9H4M9 534 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 TPT1P8Q9HAU6 139 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 CCDC177Q9NQR7 707 aaPredicted RBP16.75■□□□□ 0.27
DDX28-201ENST00000332395 GDE1Q9NZC3 331 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 RSL24D1Q9UHA3 163 aaKnown RBP16.75■□□□□ 0.27
DDX28-201ENST00000332395 TMEM98Q9Y2Y6 226 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 PRKAB1Q9Y478 270 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 PCDHB11Q9Y5F2 797 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 FOXE1O00358 373 aaPredicted RBP16.75■□□□□ 0.27
DDX28-201ENST00000332395 NOBOXO60393 691 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 E2F6O75461 281 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 IDSP22304 550 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 DCTP40126 519 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 SPIDRQ14159 915 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 CPZQ66K79 652 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 DUS1LQ6P1R4 473 aaKnown RBP16.75■□□□□ 0.27
DDX28-201ENST00000332395 ERICH5Q6P6B1 374 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 VITQ6UXI7 678 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 TMEM179BQ7Z7N9 219 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 PTOV1Q86YD1 416 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 PGBD3Q8N328 593 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 VPS37AQ8NEZ2 397 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 PJA1Q8NG27 643 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 OR5K1Q8NHB7 308 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 SLC5A11Q8WWX8 675 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 ABTB1Q969K4 478 aaPredicted RBP16.75■□□□□ 0.27
DDX28-201ENST00000332395 RAB7BQ96AH8 199 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 PHF12Q96QT6 1004 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 YTHDF1Q9BYJ9 559 aaKnown RBP16.75■□□□□ 0.27
DDX28-201ENST00000332395 OR52A5Q9H2C5 316 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 TRPV4Q9HBA0 871 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 DMRT3Q9NQL9 472 aa16.75■□□□□ 0.27
DDX28-201ENST00000332395 THAP10Q9P2Z0 257 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms