RNA–Protein interactions for RNA: ENST00000331456.6

TRAIP-201, Transcript of TRAF interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAIP, Length 2,028 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-201ENST00000331456 C8orf4Q9NR00 106 aa13.45□□□□□ -0.26
TRAIP-201ENST00000331456 AHSPQ9NZD4 102 aa13.45□□□□□ -0.26
TRAIP-201ENST00000331456 SUFUQ9UMX1 484 aa13.45□□□□□ -0.26
TRAIP-201ENST00000331456 KCNK6Q9Y257 313 aa13.45□□□□□ -0.26
TRAIP-201ENST00000331456 C2CD4DB7Z1M9 353 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 CXCR6O00574 342 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 EPN2O95208 641 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 TGFB1P01137 390 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 FUCA1P04066 466 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 HOXC4P09017 264 aaPredicted RBP13.44□□□□□ -0.26
TRAIP-201ENST00000331456 HOXB9P17482 250 aaPredicted RBP13.44□□□□□ -0.26
TRAIP-201ENST00000331456 PTPN6P29350 595 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 SERPINB1P30740 379 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 CCR8P51685 355 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 CTBSQ01459 385 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 CHRNB3Q05901 458 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 PPP4R4Q6NUP7 873 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 COMMD6Q7Z4G1 85 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 R3HCC1LQ7Z5L2 792 aaKnown RBP13.44□□□□□ -0.26
TRAIP-201ENST00000331456 CAMKMTQ7Z624 323 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 CALHM3Q86XJ0 350 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 FAM129CQ86XR2 697 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 SLC44A3Q8N4M1 653 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 MARVELD2Q8N4S9 558 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 DENND6BQ8NEG7 585 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 OR52E4Q8NGH9 312 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 ZNF597Q96LX8 424 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 RNF145Q96MT1 663 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 PITHD1Q9GZP4 211 aaPredicted RBP13.44□□□□□ -0.26
TRAIP-201ENST00000331456 KCNK12Q9HB15 430 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 WASH6PQ9NQA3 447 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 SLC6A13Q9NSD5 602 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 DLGAP2Q9P1A6 1054 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 CEP290O15078 2479 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 ANKDD1BA6NHY2 528 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 PDZK1P1A8MUH7 402 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 KDM1AO60341 852 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 CPSF4O95639 269 aaKnown RBP13.44□□□□□ -0.26
TRAIP-201ENST00000331456 LDLRP01130 860 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 GLULP15104 373 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 IGFBP4P22692 258 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 CDKN2CP42773 168 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 WNT3P56703 355 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 KIAA1024LP59773 190 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 PPP2CBP62714 309 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 PPP2CAP67775 309 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 ATP6AP1Q15904 470 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 NRF1Q16656 503 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 INTS11Q5TA45 600 aaKnown RBP13.44□□□□□ -0.26
TRAIP-201ENST00000331456 DUS1LQ6P1R4 473 aaKnown RBP13.44□□□□□ -0.26
TRAIP-201ENST00000331456 PHACTR4Q8IZ21 702 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 METTL4Q8N3J2 472 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 RPLP0P6Q8NHW5 317 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 FAM110BQ8TC76 370 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 NCLNQ969V3 563 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 MRGPRX1Q96LB2 322 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 CAMK1GQ96NX5 476 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 MYOCQ99972 504 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 OSBPL11Q9BXB4 747 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 SPNS1Q9H2V7 528 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 OR51B5Q9H339 312 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 MVB12BQ9H7P6 319 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 IMP3Q9NV31 184 aaKnown RBP13.44□□□□□ -0.26
TRAIP-201ENST00000331456 ATAD3AQ9NVI7 634 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 LIMD1Q9UGP4 676 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 BTNL2Q9UIR0 455 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 WDR37Q9Y2I8 494 aa13.44□□□□□ -0.26
TRAIP-201ENST00000331456 SAC3D1A6NKF1 404 aa13.43□□□□□ -0.26
TRAIP-201ENST00000331456 GABRR3A8MPY1 467 aa13.43□□□□□ -0.26
TRAIP-201ENST00000331456 RAP2AP10114 183 aa13.43□□□□□ -0.26
TRAIP-201ENST00000331456 C7P10643 843 aa13.43□□□□□ -0.26
TRAIP-201ENST00000331456 LAMP1P11279 417 aa13.43□□□□□ -0.26
TRAIP-201ENST00000331456 HOXB6P17509 224 aaKnown RBP13.43□□□□□ -0.26
TRAIP-201ENST00000331456 CCT8P50990 548 aa13.43□□□□□ -0.26
TRAIP-201ENST00000331456 TMTC4Q5T4D3 741 aa13.43□□□□□ -0.26
TRAIP-201ENST00000331456 ZNF621Q6ZSS3 439 aa13.43□□□□□ -0.26
TRAIP-201ENST00000331456 ZNF740Q8NDX6 193 aa13.43□□□□□ -0.26
TRAIP-201ENST00000331456 MIEF2Q96C03 454 aa13.43□□□□□ -0.26
TRAIP-201ENST00000331456 COQ8BQ96D53 544 aa13.43□□□□□ -0.26
TRAIP-201ENST00000331456 AURKBQ96GD4 344 aaPredicted RBP13.43□□□□□ -0.26
TRAIP-201ENST00000331456 SCARF2Q96GP6 870 aaPredicted RBP13.43□□□□□ -0.26
TRAIP-201ENST00000331456 REXO5Q96IC2 774 aaKnown RBP13.43□□□□□ -0.26
TRAIP-201ENST00000331456 CENPKQ9BS16 269 aa13.43□□□□□ -0.26
TRAIP-201ENST00000331456 MENTQ9BUN1 341 aa13.43□□□□□ -0.26
TRAIP-201ENST00000331456 BDH2Q9BUT1 245 aa13.43□□□□□ -0.26
TRAIP-201ENST00000331456 CHID1Q9BWS9 393 aa13.43□□□□□ -0.26
TRAIP-201ENST00000331456 RHBGQ9H310 441 aa13.43□□□□□ -0.26
TRAIP-201ENST00000331456 REEP4Q9H6H4 257 aa13.43□□□□□ -0.26
TRAIP-201ENST00000331456 NT5DC2Q9H857 520 aa13.43□□□□□ -0.26
TRAIP-201ENST00000331456 PDP2Q9P2J9 529 aa13.43□□□□□ -0.26
TRAIP-201ENST00000331456 ATP6V1HQ9UI12 483 aa13.43□□□□□ -0.26
TRAIP-201ENST00000331456 HEBP2Q9Y5Z4 205 aa13.43□□□□□ -0.26
TRAIP-201ENST00000331456 V9GYQ6 96 aa13.43□□□□□ -0.26
TRAIP-201ENST00000331456 COL4A2P08572 1712 aa13.43□□□□□ -0.26
TRAIP-201ENST00000331456 FAM149AA5PLN7 773 aa13.42□□□□□ -0.26
TRAIP-201ENST00000331456 LRRC72A6NJI9 287 aa13.42□□□□□ -0.26
TRAIP-201ENST00000331456 H3BQ06 376 aaPredicted RBP13.42□□□□□ -0.26
TRAIP-201ENST00000331456 CLIC1O00299 241 aa13.42□□□□□ -0.26
TRAIP-201ENST00000331456 SCN2BO60939 215 aa13.42□□□□□ -0.26
TRAIP-201ENST00000331456 SMNDC1O75940 238 aaKnown RBP eCLIP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms