RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 PIAS3Q9Y6X2 628 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 A0A0J9YVX5 310 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 TTC24A2A3L6 582 aaPredicted RBP11.06□□□□□ -0.64
COL4A5-201ENST00000328300 GRXCR2A6NFK2 248 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 ARHGEF33A8MVX0 844 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 HAT1O14929 419 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 KCNC1P48547 511 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 CDK6Q00534 326 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 ST3GAL3Q11203 375 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 MED22Q15528 200 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 PKDCCQ504Y2 493 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 NXPE3Q969Y0 559 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 PNPLA2Q96AD5 504 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 KCNC2Q96PR1 638 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 ARNT2Q9HBZ2 717 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 CNOT6Q9ULM6 557 aaKnown RBP11.06□□□□□ -0.64
COL4A5-201ENST00000328300 NENFQ9UMX5 172 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 LAMA4Q16363 1823 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 A0A1W2PQU0 124 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 PEX12O00623 359 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 MTX2O75431 263 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 ADRB3P13945 408 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 CLCN2P51788 898 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 ATP12AP54707 1039 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 ANKRD46Q86W74 232 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 ESAMQ96AP7 390 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 FBXL8Q96CD0 374 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 TMEM184CQ9NVA4 438 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 MBD2Q9UBB5 411 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 C1orf226A1L170 272 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 SAGE2PA6NJ88 616 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 C6P13671 934 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 FPR1P21462 350 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 OMPP47874 163 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 PITX1P78337 314 aaPredicted RBP11.06□□□□□ -0.64
COL4A5-201ENST00000328300 FAM189A2Q15884 450 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 RASGRP3Q8IV61 690 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 FCRL3Q96P31 734 aaPredicted RBP11.06□□□□□ -0.64
COL4A5-201ENST00000328300 EVA1AQ9H8M9 152 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 PDE10AQ9Y233 779 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 AP1M2Q9Y6Q5 423 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 MYH8P13535 1937 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 C7P10643 843 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 MTTPP55157 894 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 RAB25P57735 213 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 HMGCS1Q01581 520 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 IGDCC3Q8IVU1 814 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 PYCR2Q96C36 320 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 G6PC3Q9BUM1 346 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 RDH14Q9HBH5 336 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 ADAP2Q9NPF8 381 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 SLC17A6Q9P2U8 582 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 STON1Q9Y6Q2 735 aa11.06□□□□□ -0.64
COL4A5-201ENST00000328300 SCDO00767 359 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 H1F0P07305 194 aaKnown RBP11.05□□□□□ -0.64
COL4A5-201ENST00000328300 ZNF8P17098 575 aaPredicted RBP11.05□□□□□ -0.64
COL4A5-201ENST00000328300 HOXC12P31275 282 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 MGAT3Q09327 533 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 ARHGAP40Q5TG30 622 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 OR4E2Q8NGC2 313 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 COMMD4Q9H0A8 199 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 TOR4AQ9NXH8 423 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 MARK1Q9P0L2 795 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 RGS17Q9UGC6 210 aaPredicted RBP11.05□□□□□ -0.64
COL4A5-201ENST00000328300 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.05□□□□□ -0.64
COL4A5-201ENST00000328300 TMEM98Q9Y2Y6 226 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 RREB1Q92766 1687 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 TIA1P31483 386 aaKnown RBP eCLIP11.05□□□□□ -0.64
COL4A5-201ENST00000328300 NRLP54845 237 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 WNT7BP56706 349 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 MTPNP58546 118 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 HNRNPKP61978 463 aaKnown RBP eCLIP11.05□□□□□ -0.64
COL4A5-201ENST00000328300 RPS13P62277 151 aaKnown RBP11.05□□□□□ -0.64
COL4A5-201ENST00000328300 PERM1Q5SV97 790 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 OR4F3Q6IEY1 312 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 ANO7Q6IWH7 933 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 ATCAYQ86WG3 371 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 CLDN19Q8N6F1 224 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 LRTOMTQ8WZ04 291 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 POLR2J3Q9H1A7 115 aaKnown RBP11.05□□□□□ -0.64
COL4A5-201ENST00000328300 B3GAT2Q9NPZ5 323 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 GMEB2Q9UKD1 530 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 ABCA3Q99758 1704 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 BCORQ6W2J9 1755 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 TTC34A8MYJ7 566 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 PRKAR1AP10644 381 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 ENPP2Q13822 863 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 PCBP2Q15366 365 aaKnown RBP eCLIP11.05□□□□□ -0.643e-6■■■■■ 29.4
COL4A5-201ENST00000328300 OR2T5Q6IEZ7 315 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 KDELC1Q6UW63 502 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 OR10G2Q8NGC3 310 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 OR2T29Q8NH02 315 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 SNX33Q8WV41 574 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 BHLHE41Q9C0J9 482 aaPredicted RBP11.05□□□□□ -0.64
COL4A5-201ENST00000328300 TPT1P8Q9HAU6 139 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 PREBQ9HCU5 417 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 DKK3Q9UBP4 350 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 ZNF451Q9Y4E5 1061 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 CPED1A4D0V7 1026 aa11.05□□□□□ -0.64
COL4A5-201ENST00000328300 LAMTOR5O43504 91 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms