RNA–Protein interactions for RNA: ENST00000328159.8

TPM3-205, Transcript of tropomyosin 3, humanhuman

TSL 2 BASIC

Gene TPM3, Length 1,771 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-205ENST00000328159 BIRC7Q96CA5 298 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 BMFQ96LC9 184 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 NSMCE2Q96MF7 247 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 WDR92Q96MX6 357 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 CCDC115Q96NT0 180 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 GBP5Q96PP8 586 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 AIF1LQ9BQI0 150 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 SEMA6AQ9H2E6 1030 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 OR51B5Q9H339 312 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 RPF2Q9H7B2 306 aaKnown RBP14.36□□□□□ -0.11
TPM3-205ENST00000328159 MVB12BQ9H7P6 319 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 PRDM8Q9NQV8 689 aa14.36□□□□□ -0.11
TPM3-205ENST00000328159 CUEDC1Q9NWM3 386 aaPredicted RBP14.36□□□□□ -0.11
TPM3-205ENST00000328159 FAM120CQ9NX05 1096 aaKnown RBP14.36□□□□□ -0.11
TPM3-205ENST00000328159 NDRG2Q9UN36 371 aaKnown RBP14.36□□□□□ -0.11
TPM3-205ENST00000328159 H0Y8X5 98 aa14.35□□□□□ -0.11
TPM3-205ENST00000328159 RFXANKO14593 260 aa14.35□□□□□ -0.11
TPM3-205ENST00000328159 HNRNPRO43390 633 aaKnown RBP14.35□□□□□ -0.11
TPM3-205ENST00000328159 SCN2BO60939 215 aa14.35□□□□□ -0.11
TPM3-205ENST00000328159 APBB3O95704 486 aa14.35□□□□□ -0.11
TPM3-205ENST00000328159 UMPSP11172 480 aa14.35□□□□□ -0.11
TPM3-205ENST00000328159 HNRNPA2B1P22626 353 aaKnown RBP14.35□□□□□ -0.11
TPM3-205ENST00000328159 CXCR2P25025 360 aa14.35□□□□□ -0.11
TPM3-205ENST00000328159 PTX3P26022 381 aaPredicted RBP14.35□□□□□ -0.11
TPM3-205ENST00000328159 PSMB5P28074 263 aa14.35□□□□□ -0.11
TPM3-205ENST00000328159 OXTRP30559 389 aa14.35□□□□□ -0.11
TPM3-205ENST00000328159 PKLRP30613 574 aa14.35□□□□□ -0.11
TPM3-205ENST00000328159 RAB28P51157 221 aa14.35□□□□□ -0.11
TPM3-205ENST00000328159 CCR8P51685 355 aa14.35□□□□□ -0.11
TPM3-205ENST00000328159 REEP5Q00765 189 aa14.35□□□□□ -0.11
TPM3-205ENST00000328159 RPE65Q16518 533 aa14.35□□□□□ -0.11
TPM3-205ENST00000328159 HKDC1Q2TB90 917 aa14.35□□□□□ -0.11
TPM3-205ENST00000328159 TPRG1LQ5T0D9 272 aa14.35□□□□□ -0.11
TPM3-205ENST00000328159 ANO7Q6IWH7 933 aa14.35□□□□□ -0.11
TPM3-205ENST00000328159 ENPP7Q6UWV6 458 aa14.35□□□□□ -0.11
TPM3-205ENST00000328159 COMMD6Q7Z4G1 85 aa14.35□□□□□ -0.11
TPM3-205ENST00000328159 METTL4Q8N3J2 472 aa14.35□□□□□ -0.11
TPM3-205ENST00000328159 DTWD1Q8N5C7 304 aa14.35□□□□□ -0.11
TPM3-205ENST00000328159 ABHD11Q8NFV4 315 aa14.35□□□□□ -0.11
TPM3-205ENST00000328159 TNIP2Q8NFZ5 429 aa14.35□□□□□ -0.11
TPM3-205ENST00000328159 PPWD1Q96BP3 646 aaKnown RBP14.35□□□□□ -0.11
TPM3-205ENST00000328159 PDXPQ96GD0 296 aa14.35□□□□□ -0.11
TPM3-205ENST00000328159 RAB11FIP5Q9BXF6 653 aa14.35□□□□□ -0.11
TPM3-205ENST00000328159 SLC2A4RGQ9NR83 387 aa14.35□□□□□ -0.11
TPM3-205ENST00000328159 EBF1Q9UH73 591 aa14.35□□□□□ -0.11
TPM3-205ENST00000328159 ADGRE2Q9UHX3 823 aa14.35□□□□□ -0.11
TPM3-205ENST00000328159 ANAPC2Q9UJX6 822 aa14.35□□□□□ -0.11
TPM3-205ENST00000328159 INVSQ9Y283 1065 aa14.35□□□□□ -0.11
TPM3-205ENST00000328159 OR52A4PA6NMU1 304 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 SAP18O00422 153 aaKnown RBP14.34□□□□□ -0.11
TPM3-205ENST00000328159 GSTA4O15217 222 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 ANXA6P08133 673 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 LAMP1P11279 417 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 SRFP11831 508 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 UQCRBP14927 111 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 TFF2Q03403 129 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 CCDC85BQ15834 202 aaPredicted RBP14.34□□□□□ -0.11
TPM3-205ENST00000328159 CPTPQ5TA50 214 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 ANKRD26P1Q6NSI1 321 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 CAMKMTQ7Z624 323 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 AMIGO2Q86SJ2 522 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 PHACTR4Q8IZ21 702 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 ZNF548Q8NEK5 533 aaPredicted RBP14.34□□□□□ -0.11
TPM3-205ENST00000328159 TRPV3Q8NET8 790 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 FLCNQ8NFG4 579 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 OR2L8Q8NGY9 312 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 WDR48Q8TAF3 677 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 EME1Q96AY2 570 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 MIEF2Q96C03 454 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 AURKBQ96GD4 344 aaPredicted RBP14.34□□□□□ -0.11
TPM3-205ENST00000328159 BTBD9Q96Q07 612 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 DUSP26Q9BV47 211 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 RHBGQ9H310 441 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 XKR8Q9H6D3 395 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 KAT8Q9H7Z6 458 aaKnown RBP14.34□□□□□ -0.11
TPM3-205ENST00000328159 NT5DC2Q9H857 520 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 BTBD3Q9Y2F9 522 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 GABRR3A8MPY1 467 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 FAM220BPB1ANY3 271 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 GMNNO75496 209 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 SEMA4FO95754 770 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 PIM1P11309 404 aaPredicted RBP14.34□□□□□ -0.11
TPM3-205ENST00000328159 HTR1BP28222 390 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 AKT2P31751 481 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 POLE2P56282 527 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 ZNF763Q0D2J5 394 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 MTX3Q5HYI7 312 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 GCNT7Q6ZNI0 430 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 Q6ZS52 159 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 CALHM3Q86XJ0 350 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 PGBD3Q8N328 593 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 PAPD5Q8NDF8 572 aaKnown RBP14.34□□□□□ -0.11
TPM3-205ENST00000328159 OR4K1Q8NGD4 311 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 OR52E1Q8NGJ3 308 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 FAM120BQ96EK7 910 aaKnown RBP14.34□□□□□ -0.11
TPM3-205ENST00000328159 PRPF18Q99633 342 aaKnown RBP14.34□□□□□ -0.11
TPM3-205ENST00000328159 TBCDQ9BTW9 1192 aa14.34□□□□□ -0.11
TPM3-205ENST00000328159 PITHD1Q9GZP4 211 aaPredicted RBP14.34□□□□□ -0.11
TPM3-205ENST00000328159 POLMQ9NP87 494 aaPredicted RBP14.34□□□□□ -0.11
TPM3-205ENST00000328159 SCHIP1Q9P0W5 487 aaPredicted RBP14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms