RNA–Protein interactions for RNA: ENST00000327304.9

EXOSC3-201, Transcript of exosome component 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXOSC3, Length 1,806 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-201ENST00000327304 PCDHGA7Q9Y5G6 932 aa18.04■□□□□ 0.48
EXOSC3-201ENST00000327304 RNF215Q9Y6U7 377 aa18.04■□□□□ 0.48
EXOSC3-201ENST00000327304 OTOGLQ3ZCN5 2332 aa18.04■□□□□ 0.48
EXOSC3-201ENST00000327304 NPIPB8E9PQR5 432 aa18.03■□□□□ 0.48
EXOSC3-201ENST00000327304 NR5A2O00482 541 aa18.03■□□□□ 0.48
EXOSC3-201ENST00000327304 DLL1O00548 723 aa18.03■□□□□ 0.48
EXOSC3-201ENST00000327304 ANGPT2O15123 496 aa18.03■□□□□ 0.48
EXOSC3-201ENST00000327304 SIGLEC6O43699 453 aa18.03■□□□□ 0.48
EXOSC3-201ENST00000327304 PCDHGA12O60330 932 aa18.03■□□□□ 0.48
EXOSC3-201ENST00000327304 PRAMEF4O60810 478 aa18.03■□□□□ 0.48
EXOSC3-201ENST00000327304 FKBP6O75344 327 aa18.03■□□□□ 0.48
EXOSC3-201ENST00000327304 CHRM5P08912 532 aaPredicted RBP18.03■□□□□ 0.48
EXOSC3-201ENST00000327304 ALPPL2P10696 532 aa18.03■□□□□ 0.48
EXOSC3-201ENST00000327304 JUPP14923 745 aa18.03■□□□□ 0.48
EXOSC3-201ENST00000327304 PCSK2P16519 638 aa18.03■□□□□ 0.48
EXOSC3-201ENST00000327304 NBL1P41271 181 aa18.03■□□□□ 0.48
EXOSC3-201ENST00000327304 NME5P56597 212 aa18.03■□□□□ 0.48
EXOSC3-201ENST00000327304 KCNK10P57789 538 aa18.03■□□□□ 0.48
EXOSC3-201ENST00000327304 YBX1P67809 324 aaKnown RBP18.03■□□□□ 0.48
EXOSC3-201ENST00000327304 SPEM2Q0P670 501 aa18.03■□□□□ 0.48
EXOSC3-201ENST00000327304 BIRC2Q13490 618 aa18.03■□□□□ 0.48
EXOSC3-201ENST00000327304 PRAMEF9Q5VWM5 478 aa18.03■□□□□ 0.48
EXOSC3-201ENST00000327304 ZCCHC8Q6NZY4 707 aaKnown RBP18.03■□□□□ 0.48
EXOSC3-201ENST00000327304 AAGABQ6PD74 315 aa18.03■□□□□ 0.48
EXOSC3-201ENST00000327304 EID2Q8N6I1 236 aa18.03■□□□□ 0.48
EXOSC3-201ENST00000327304 SH3KBP1Q96B97 665 aa18.03■□□□□ 0.48
EXOSC3-201ENST00000327304 HBEGFQ99075 208 aa18.03■□□□□ 0.48
EXOSC3-201ENST00000327304 C1orf50Q9BV19 199 aa18.03■□□□□ 0.48
EXOSC3-201ENST00000327304 DUSP23Q9BVJ7 150 aa18.03■□□□□ 0.48
EXOSC3-201ENST00000327304 FARSBQ9NSD9 589 aaKnown RBP18.03■□□□□ 0.48
EXOSC3-201ENST00000327304 GPRC5BQ9NZH0 403 aa18.03■□□□□ 0.48
EXOSC3-201ENST00000327304 CROTQ9UKG9 612 aa18.03■□□□□ 0.48
EXOSC3-201ENST00000327304 EIF3LQ9Y262 564 aaKnown RBP18.03■□□□□ 0.48
EXOSC3-201ENST00000327304 A0A1W2PP18 115 aa18.02■□□□□ 0.48
EXOSC3-201ENST00000327304 OR6C74A6NCV1 312 aa18.02■□□□□ 0.48
EXOSC3-201ENST00000327304 CFLARO15519 480 aa18.02■□□□□ 0.48
EXOSC3-201ENST00000327304 PRICKLE3O43900 615 aaPredicted RBP18.02■□□□□ 0.48
EXOSC3-201ENST00000327304 CAPN3P20807 821 aa18.02■□□□□ 0.48
EXOSC3-201ENST00000327304 PRPH2P23942 346 aa18.02■□□□□ 0.48
EXOSC3-201ENST00000327304 ZFP36L2P47974 494 aaKnown RBP18.02■□□□□ 0.48
EXOSC3-201ENST00000327304 CHIT1Q13231 466 aa18.02■□□□□ 0.48
EXOSC3-201ENST00000327304 RFTN2Q52LD8 501 aaPredicted RBP18.02■□□□□ 0.48
EXOSC3-201ENST00000327304 OR10G6Q8NH81 332 aa18.02■□□□□ 0.48
EXOSC3-201ENST00000327304 SELENOMQ8WWX9 145 aa18.02■□□□□ 0.48
EXOSC3-201ENST00000327304 NEIL2Q969S2 332 aa18.02■□□□□ 0.48
EXOSC3-201ENST00000327304 SPDL1Q96EA4 605 aa18.02■□□□□ 0.48
EXOSC3-201ENST00000327304 HOPXQ9BPY8 73 aaPredicted RBP18.02■□□□□ 0.48
EXOSC3-201ENST00000327304 ELOVL6Q9H5J4 265 aa18.02■□□□□ 0.48
EXOSC3-201ENST00000327304 UCK1Q9HA47 277 aa18.02■□□□□ 0.48
EXOSC3-201ENST00000327304 L3MBTL1Q9Y468 752 aa18.02■□□□□ 0.48
EXOSC3-201ENST00000327304 LY6G6EA0A0G2JKS1 128 aa18.02■□□□□ 0.47
EXOSC3-201ENST00000327304 FAM234BA2RU67 622 aa18.02■□□□□ 0.47
EXOSC3-201ENST00000327304 E7EQ34 232 aa18.02■□□□□ 0.47
EXOSC3-201ENST00000327304 KRT36O76013 467 aa18.02■□□□□ 0.47
EXOSC3-201ENST00000327304 RSL1D1O76021 490 aaKnown RBP18.02■□□□□ 0.47
EXOSC3-201ENST00000327304 PDYNP01213 254 aa18.02■□□□□ 0.47
EXOSC3-201ENST00000327304 ME2P23368 584 aa18.02■□□□□ 0.47
EXOSC3-201ENST00000327304 UFM1P61960 85 aa18.02■□□□□ 0.47
EXOSC3-201ENST00000327304 IRF8Q02556 426 aa18.02■□□□□ 0.47
EXOSC3-201ENST00000327304 VPS26BQ4G0F5 336 aa18.02■□□□□ 0.47
EXOSC3-201ENST00000327304 IL23RQ5VWK5 629 aa18.02■□□□□ 0.47
EXOSC3-201ENST00000327304 LCTLQ6UWM7 567 aa18.02■□□□□ 0.47
EXOSC3-201ENST00000327304 ZFAND4Q86XD8 727 aa18.02■□□□□ 0.47
EXOSC3-201ENST00000327304 PROKR1Q8TCW9 393 aa18.02■□□□□ 0.47
EXOSC3-201ENST00000327304 SETD7Q8WTS6 366 aaKnown RBP18.02■□□□□ 0.47
EXOSC3-201ENST00000327304 APOLD1Q96LR9 279 aa18.02■□□□□ 0.47
EXOSC3-201ENST00000327304 TWSG1Q9GZX9 223 aa18.02■□□□□ 0.47
EXOSC3-201ENST00000327304 IRF2BPLQ9H1B7 796 aa18.02■□□□□ 0.47
EXOSC3-201ENST00000327304 LRTM1Q9HBL6 345 aa18.02■□□□□ 0.47
EXOSC3-201ENST00000327304 SPAG4Q9NPE6 437 aa18.02■□□□□ 0.47
EXOSC3-201ENST00000327304 C1orf109Q9NX04 203 aa18.02■□□□□ 0.47
EXOSC3-201ENST00000327304 LRIT1Q9P2V4 623 aa18.02■□□□□ 0.47
EXOSC3-201ENST00000327304 STX18Q9P2W9 335 aaKnown RBP18.02■□□□□ 0.47
EXOSC3-201ENST00000327304 BCAP29Q9UHQ4 241 aa18.02■□□□□ 0.47
EXOSC3-201ENST00000327304 DYRK1BQ9Y463 629 aa18.02■□□□□ 0.47
EXOSC3-201ENST00000327304 KCNE2Q9Y6J6 123 aa18.02■□□□□ 0.47
EXOSC3-201ENST00000327304 U3KQA8 63 aa18.02■□□□□ 0.47
EXOSC3-201ENST00000327304 LILRA5A6NI73 299 aa18.01■□□□□ 0.47
EXOSC3-201ENST00000327304 RHPN2P1A8MT19 583 aa18.01■□□□□ 0.47
EXOSC3-201ENST00000327304 CLGNO14967 610 aa18.01■□□□□ 0.47
EXOSC3-201ENST00000327304 TYRP1P17643 537 aa18.01■□□□□ 0.47
EXOSC3-201ENST00000327304 POLR2CP19387 275 aaPredicted RBP18.01■□□□□ 0.47
EXOSC3-201ENST00000327304 HNF4AP41235 474 aa18.01■□□□□ 0.47
EXOSC3-201ENST00000327304 CASP2P42575 452 aa18.01■□□□□ 0.47
EXOSC3-201ENST00000327304 POLR2JP52435 117 aaKnown RBP18.01■□□□□ 0.47
EXOSC3-201ENST00000327304 CEACAM7Q14002 265 aa18.01■□□□□ 0.47
EXOSC3-201ENST00000327304 E2F2Q14209 437 aa18.01■□□□□ 0.47
EXOSC3-201ENST00000327304 RCN1Q15293 331 aa18.01■□□□□ 0.47
EXOSC3-201ENST00000327304 PRMT9Q6P2P2 845 aa18.01■□□□□ 0.47
EXOSC3-201ENST00000327304 CYP20A1Q6UW02 462 aa18.01■□□□□ 0.47
EXOSC3-201ENST00000327304 RETREG3Q86VR2 466 aa18.01■□□□□ 0.47
EXOSC3-201ENST00000327304 FAM20CQ8IXL6 584 aa18.01■□□□□ 0.47
EXOSC3-201ENST00000327304 OR2A1Q8NGT9 310 aa18.01■□□□□ 0.47
EXOSC3-201ENST00000327304 RSC1A1Q92681 617 aa18.01■□□□□ 0.47
EXOSC3-201ENST00000327304 CCDC124Q96CT7 223 aaKnown RBP18.01■□□□□ 0.47
EXOSC3-201ENST00000327304 TEX37Q96LM6 180 aa18.01■□□□□ 0.47
EXOSC3-201ENST00000327304 SLC38A3Q99624 504 aa18.01■□□□□ 0.47
EXOSC3-201ENST00000327304 RXFP3Q9NSD7 469 aa18.01■□□□□ 0.47
EXOSC3-201ENST00000327304 DNAAF2Q9NVR5 837 aaKnown RBP18.01■□□□□ 0.47
EXOSC3-201ENST00000327304 GID8Q9NWU2 228 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms