RNA–Protein interactions for RNA: ENST00000325617.9

CLGN-201, Transcript of calmegin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLGN, Length 3,043 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLGN-201ENST00000325617 ASTLQ6HA08 431 aaPredicted RBP12.67□□□□□ -0.38
CLGN-201ENST00000325617 FAM217AQ8IXS0 508 aa12.67□□□□□ -0.38
CLGN-201ENST00000325617 AADATQ8N5Z0 425 aa12.67□□□□□ -0.38
CLGN-201ENST00000325617 NELL1Q92832 810 aa12.67□□□□□ -0.38
CLGN-201ENST00000325617 CIDECQ96AQ7 238 aaPredicted RBP12.67□□□□□ -0.38
CLGN-201ENST00000325617 VOPP1Q96AW1 172 aa12.67□□□□□ -0.38
CLGN-201ENST00000325617 CNDP2Q96KP4 475 aaKnown RBP12.67□□□□□ -0.38
CLGN-201ENST00000325617 SORBS1Q9BX66 1292 aaKnown RBP12.67□□□□□ -0.38
CLGN-201ENST00000325617 SLIRPQ9GZT3 109 aaKnown RBP12.67□□□□□ -0.38
CLGN-201ENST00000325617 KCTD5Q9NXV2 234 aa12.67□□□□□ -0.38
CLGN-201ENST00000325617 TPRKBQ9Y3C4 175 aa12.67□□□□□ -0.38
CLGN-201ENST00000325617 ATG2BQ96BY7 2078 aa12.67□□□□□ -0.38
CLGN-201ENST00000325617 MYO15AQ9UKN7 3530 aa12.67□□□□□ -0.38
CLGN-201ENST00000325617 GNG14A0A1W2PPG7 69 aa12.67□□□□□ -0.38
CLGN-201ENST00000325617 M0R082 166 aa12.67□□□□□ -0.38
CLGN-201ENST00000325617 GFRA2O00451 464 aa12.67□□□□□ -0.38
CLGN-201ENST00000325617 AOC2O75106 756 aa12.67□□□□□ -0.38
CLGN-201ENST00000325617 GCM2O75603 506 aaPredicted RBP12.67□□□□□ -0.38
CLGN-201ENST00000325617 CYP7B1O75881 506 aa12.67□□□□□ -0.38
CLGN-201ENST00000325617 CCNDBP1O95273 360 aa12.67□□□□□ -0.38
CLGN-201ENST00000325617 IGFBP1P08833 259 aaPredicted RBP12.67□□□□□ -0.38
CLGN-201ENST00000325617 PDHA2P29803 388 aa12.67□□□□□ -0.38
CLGN-201ENST00000325617 CDH12P55289 794 aa12.67□□□□□ -0.38
CLGN-201ENST00000325617 GABARAPL2P60520 117 aa12.67□□□□□ -0.38
CLGN-201ENST00000325617 PFN3P60673 137 aa12.67□□□□□ -0.38
CLGN-201ENST00000325617 DOC2AQ14183 400 aa12.67□□□□□ -0.38
CLGN-201ENST00000325617 DGUOKQ16854 277 aa12.67□□□□□ -0.38
CLGN-201ENST00000325617 DUOXA1Q1HG43 343 aa12.67□□□□□ -0.38
CLGN-201ENST00000325617 ZNF385BQ569K4 471 aa12.67□□□□□ -0.38
CLGN-201ENST00000325617 MACC1Q6ZN28 852 aa12.67□□□□□ -0.38
CLGN-201ENST00000325617 COPS4Q9BT78 406 aa12.67□□□□□ -0.38
CLGN-201ENST00000325617 HTATIP2Q9BUP3 242 aa12.67□□□□□ -0.38
CLGN-201ENST00000325617 SNX6Q9UNH7 406 aa12.67□□□□□ -0.38
CLGN-201ENST00000325617 SH2B3Q9UQQ2 575 aa12.67□□□□□ -0.38
CLGN-201ENST00000325617 CCL26Q9Y258 94 aa12.67□□□□□ -0.38
CLGN-201ENST00000325617 PCDHGA6Q9Y5G7 932 aa12.67□□□□□ -0.38
CLGN-201ENST00000325617 MYO9BQ13459 2157 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 SMIM30A4D0T7 59 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 PRAMEF25A6NGN4 478 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 GREM1O60565 184 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 C1SP09871 688 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 CD9P21926 228 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 DNAJA1P31689 397 aaKnown RBP12.66□□□□□ -0.38
CLGN-201ENST00000325617 PTGER1P34995 402 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 FEN1P39748 380 aaKnown RBP12.66□□□□□ -0.38
CLGN-201ENST00000325617 ETV3P41162 512 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 NSG1P42857 185 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 NR4A2P43354 598 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 CSNK1DP48730 415 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 TGM4P49221 684 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 HIST2H2ACQ16777 129 aaPredicted RBP12.66□□□□□ -0.38
CLGN-201ENST00000325617 TTLL9Q3SXZ7 439 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 SLC8B1Q6J4K2 584 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 RETSATQ6NUM9 610 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 OLIG3Q7RTU3 272 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 FAM124AQ86V42 546 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 NPAS4Q8IUM7 802 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 P3H2Q8IVL5 708 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 ZNF461Q8TAF7 563 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 C2orf49Q9BVC5 232 aaPredicted RBP12.66□□□□□ -0.38
CLGN-201ENST00000325617 DSN1Q9H410 356 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 CWH43Q9H720 699 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 SCHIP1Q9P0W5 487 aaPredicted RBP12.66□□□□□ -0.38
CLGN-201ENST00000325617 OGDHLQ9ULD0 1010 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 SAMD4AQ9UPU9 718 aaKnown RBP12.66□□□□□ -0.38
CLGN-201ENST00000325617 TRBV5-4A0A0C4DH59 114 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 GRXCR2A6NFK2 248 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 DLGAP3O95886 979 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 SLC10A3P09131 477 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 SELPP16109 830 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 TGM1P22735 817 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 RPS3P23396 243 aaKnown RBP eCLIP12.66□□□□□ -0.38
CLGN-201ENST00000325617 PPP3CCP48454 512 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 ACSM2AQ08AH3 577 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 EEF1AKMT2Q5JPI9 291 aaKnown RBP12.66□□□□□ -0.38
CLGN-201ENST00000325617 ZNF362Q5T0B9 420 aaPredicted RBP12.66□□□□□ -0.38
CLGN-201ENST00000325617 ACSM2BQ68CK6 577 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 BCDIN3DQ7Z5W3 292 aaKnown RBP12.66□□□□□ -0.38
CLGN-201ENST00000325617 POC5Q8NA72 575 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 HJURPQ8NCD3 748 aaPredicted RBP12.66□□□□□ -0.38
CLGN-201ENST00000325617 RDH12Q96NR8 316 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 CENPOQ9BU64 300 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 TM9SF3Q9HD45 589 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 ZDHHC3Q9NYG2 299 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 NDRG4Q9ULP0 352 aaKnown RBP12.66□□□□□ -0.38
CLGN-201ENST00000325617 NAALAD2Q9Y3Q0 740 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 MAP4K5Q9Y4K4 846 aa12.66□□□□□ -0.38
CLGN-201ENST00000325617 A0A1W2PRU2 124 aa12.65□□□□□ -0.38
CLGN-201ENST00000325617 TMEM229AB2RXF0 380 aa12.65□□□□□ -0.38
CLGN-201ENST00000325617 TLL1O43897 1013 aa12.65□□□□□ -0.38
CLGN-201ENST00000325617 AIREO43918 545 aa12.65□□□□□ -0.38
CLGN-201ENST00000325617 SRCP12931 536 aa12.65□□□□□ -0.38
CLGN-201ENST00000325617 FPR1P21462 350 aa12.65□□□□□ -0.38
CLGN-201ENST00000325617 CD40LGP29965 261 aa12.65□□□□□ -0.38
CLGN-201ENST00000325617 HLA-FP30511 346 aa12.65□□□□□ -0.38
CLGN-201ENST00000325617 CTSCP53634 463 aa12.65□□□□□ -0.38
CLGN-201ENST00000325617 AP1S1P61966 158 aa12.65□□□□□ -0.38
CLGN-201ENST00000325617 RPS26P62854 115 aaKnown RBP12.65□□□□□ -0.38
CLGN-201ENST00000325617 TOP3AQ13472 1001 aaPredicted RBP12.65□□□□□ -0.38
CLGN-201ENST00000325617 PLEKHG6Q3KR16 790 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms