RNA–Protein interactions for RNA: ENST00000325243.6

CBX3P1-201, Transcript of chromobox 3 pseudogene 1, humanhuman

BASIC

Gene CBX3P1, Length 554 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P1-201ENST00000325243 AP3D1O14617 1153 aa2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 P4HA2O15460 535 aa2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 PLOD3O60568 738 aa2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 ZBED4O75132 1171 aa2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 DNTTP04053 509 aa2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 THY1P04216 161 aa2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 AADACP22760 399 aa2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 NRIP1P48552 1158 aa2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 NDST2P52849 883 aa2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 MAPK12P53778 367 aa2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 HNRNPKP61978 463 aaKnown RBP eCLIP2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 HSPB3Q12988 150 aa2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 PCLAFQ15004 111 aa2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 DUSP28Q4G0W2 176 aa2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 CBWD6Q4V339 395 aa2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 CBWD3Q5JTY5 395 aa2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 AGAP7PQ5VUJ5 663 aa2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 KRTAP5-7Q6L8G8 165 aa2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 IGFL3Q6UXB1 125 aa2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 BRINP3Q76B58 766 aa2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 CATSPER3Q86XQ3 398 aa2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 HSCBQ8IWL3 235 aa2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 GPC2Q8N158 579 aa2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 OR52B6Q8NGF0 335 aa2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 SPPL2AQ8TCT8 520 aa2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 AGAP11Q8TF27 550 aa2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 SSC4DQ8WTU2 575 aa2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 CDCA3Q99618 268 aaPredicted RBP2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 TREX2Q9BQ50 279 aaPredicted RBP2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 OCR1Q9BZK8 76 aa2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 MYNNQ9NPC7 610 aa2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 SH3GLB2Q9NR46 395 aa2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 NLGN3Q9NZ94 848 aa2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 IKZF3Q9UKT9 509 aa2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 NOL7Q9UMY1 257 aaKnown RBP2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 PTRH2Q9Y3E5 179 aaKnown RBP2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 MAGED1Q9Y5V3 778 aaPredicted RBP2.15□□□□□ -2.07
CBX3P1-201ENST00000325243 TRIOBPQ9H2D6 2365 aa2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 CASTOR2A6NHX0 329 aa2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 TSPY2A6NKD2 308 aa2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 ARHGEF33A8MVX0 844 aa2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 LY6G6DO95868 133 aa2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 RENP00797 406 aa2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 RAB40ALP0C0E4 278 aa2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 TSPY3P0CV98 308 aa2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 TSPY8P0CW00 308 aa2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 SELEP16581 610 aa2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 DNASE1P24855 282 aa2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 LMO2P25791 158 aa2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 HOXD13P35453 343 aa2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 ZNF75DP51815 510 aa2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 PPIAP62937 165 aaKnown RBP2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 TSPY1Q01534 308 aa2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 VEZF1Q14119 521 aa2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 KIAA0141Q14154 515 aaPredicted RBP2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 UPP1Q16831 310 aa2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 Q1RN00 199 aa2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 ATAD3CQ5T2N8 411 aa2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 NKAIN3Q8N8D7 197 aa2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 METTL21AQ8WXB1 218 aa2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 ZNF622Q969S3 477 aaKnown RBP eCLIP2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 FAM120BQ96EK7 910 aaKnown RBP2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 YTHDF1Q9BYJ9 559 aaKnown RBP2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 DNAI2Q9GZS0 605 aa2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 EGLN3Q9H6Z9 239 aa2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 MRGBPQ9NV56 204 aa2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 HAUS2Q9NVX0 235 aa2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 NSMCE4AQ9NXX6 385 aa2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 CLEC5AQ9NY25 188 aa2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 NKIRAS2Q9NYR9 191 aa2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 NFKBIL1Q9UBC1 381 aaPredicted RBP2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 CRNNQ9UBG3 495 aaPredicted RBP2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 ADD3Q9UEY8 706 aaKnown RBP2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 GIMAP2Q9UG22 337 aa2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 VPS28Q9UK41 221 aa2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 NAALAD2Q9Y3Q0 740 aa2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 TTLL3Q9Y4R7 772 aa2.14□□□□□ -2.07
CBX3P1-201ENST00000325243 IQCMA0A1B0GVH7 501 aa2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 FAM168BA1KXE4 195 aa2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 F8VVB4 439 aa2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 F8VWA3 439 aa2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 RNF103O00237 685 aa2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 IPO8O15397 1037 aaKnown RBP2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 ECE2O60344 883 aa2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 PGM3O95394 542 aa2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 RPN1P04843 607 aaKnown RBP2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 ADRB2P07550 413 aa2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 LINGO3P0C6S8 592 aa2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 PFKFB1P16118 471 aa2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 PORP16435 677 aaPredicted RBP2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 MGMTP16455 207 aa2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 CD27P26842 260 aa2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 PKLRP30613 574 aa2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 NDUFV3P56181 108 aaKnown RBP2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 CUL3Q13618 768 aa2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 RUNX3Q13761 415 aa2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 BECN1Q14457 450 aa2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 OPCMLQ14982 345 aa2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 FAM133BQ5BKY9 247 aaKnown RBP2.13□□□□□ -2.07
CBX3P1-201ENST00000325243 UTF1Q5T230 341 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms