RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 DLC1Q96QB1 1528 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 A0A1B0GVC2 190 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 FBP2O00757 339 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 TPSB2P20231 275 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 ADH7P40394 386 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 SLC1A2P43004 574 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 TPSAB1Q15661 275 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 PHF19Q5T6S3 580 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 ZNF773Q6PK81 442 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 P4HA3Q7Z4N8 544 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 PIM3Q86V86 326 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 SLC15A3Q8IY34 581 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 DNAJC19Q96DA6 116 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 SLC6A7Q99884 636 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 DPYSL5Q9BPU6 564 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 CD320Q9NPF0 282 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 TNFRSF10BO14763 440 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 TNFSF12O43508 249 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 PRKCZQ05513 592 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 OLIG2Q13516 323 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 SEC23BQ15437 767 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 MLIPQ5VWP3 458 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 NCEH1Q6PIU2 408 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 F5H0A9 414 aaPredicted RBP7.7□□□□□ -1.18
CIITA-201ENST00000324288 MPZL2O60487 215 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 MAFO75444 373 aaPredicted RBP7.7□□□□□ -1.18
CIITA-201ENST00000324288 SLITRK5O94991 958 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 ADRA1BP35368 520 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 PLGLB1Q02325 96 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 ADGRD2Q7Z7M1 963 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 NXPE1Q8N323 547 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 TOP6BLQ8N6T0 577 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 ABHD5Q8WTS1 349 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 OR52B2Q96RD2 323 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 FGFBP2Q9BYJ0 223 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 MRPS30Q9NP92 439 aaKnown RBP7.7□□□□□ -1.18
CIITA-201ENST00000324288 NUDT4Q9NZJ9 180 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 DLG5Q8TDM6 1919 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 ASGR1P07306 291 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 RASGEF1BQ0VAM2 473 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 HYAL4Q2M3T9 481 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 SH3PXD2AQ5TCZ1 1133 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 CYP2U1Q7Z449 544 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 XYLT1Q86Y38 959 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 ZFP41Q8N8Y5 198 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 MSLNLQ96KJ4 702 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 ADAP2Q9NPF8 381 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 ZNF510Q9Y2H8 683 aa7.7□□□□□ -1.18
CIITA-201ENST00000324288 OIP5O43482 229 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 KLK1P06870 262 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 ITGA5P08648 1049 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 UFM1P61960 85 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 ZNF423Q2M1K9 1284 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 SMYD5Q6GMV2 418 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 RBM12BQ8IXT5 1001 aaKnown RBP7.69□□□□□ -1.18
CIITA-201ENST00000324288 RASGEF1CQ8N431 466 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 CNIH3Q8TBE1 160 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 DEDD2Q8WXF8 326 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 CENPBD1B2RD01 187 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 NPHS1O60500 1241 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 IFNA2P01563 188 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 ALPPP05187 535 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 GRPRP30550 384 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 MLLT3P42568 568 aaPredicted RBP7.69□□□□□ -1.18
CIITA-201ENST00000324288 MAGEA3P43357 314 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 SOX2P48431 317 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 GTF2BQ00403 316 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 DSC3Q14574 896 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 MON1AQ86VX9 555 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 BTN2A3PQ96KV6 586 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 FTHL17Q9BXU8 183 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 ZNF358Q9NW07 568 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 GIMAP2Q9UG22 337 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 ZNF705GA8MUZ8 300 aaPredicted RBP7.69□□□□□ -1.18
CIITA-201ENST00000324288 NDST3O95803 873 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 RENP00797 406 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 PKMP14618 531 aaKnown RBP7.69□□□□□ -1.18
CIITA-201ENST00000324288 EDNRBP24530 442 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 OC90Q02509 493 aaPredicted RBP7.69□□□□□ -1.18
CIITA-201ENST00000324288 VSTM1Q6UX27 236 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 RPS27LQ71UM5 84 aaKnown RBP7.69□□□□□ -1.18
CIITA-201ENST00000324288 BSNDQ8WZ55 320 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 IL12RB2Q99665 862 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 HEPHQ9BQS7 1158 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 SALL4Q9UJQ4 1053 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 PLCE1Q9P212 2302 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 GRXCR1A8MXD5 290 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 CXorf49A8MYA2 514 aaPredicted RBP7.69□□□□□ -1.18
CIITA-201ENST00000324288 AP2A1O95782 977 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 SLC35G6P0C7Q6 338 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 SP3Q02447 781 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 MSL3Q8N5Y2 521 aaKnown RBP7.69□□□□□ -1.18
CIITA-201ENST00000324288 ZNF565Q8N9K5 539 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 CLEC4CQ8WTT0 213 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 FAM198AQ9UFP1 575 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 GRXCR2A6NFK2 248 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 MTX2O75431 263 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 CD72P21854 359 aa7.69□□□□□ -1.18
CIITA-201ENST00000324288 DNAJA1P31689 397 aaKnown RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms